HEADER TRANSFERASE 28-NOV-06 2O1B TITLE STRUCTURE OF AMINOTRANSFERASE FROM STAPHYLOCOCCUS AUREUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINOTRANSFERASE, CLASS I; COMPND 3 CHAIN: A; COMPND 4 EC: 2.6.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 STRAIN: COLA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS AMINOTRASFERASE, CLASS I, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.E.MCGRATH,A.DHARAMSI,D.THAMBIPILLAI,A.M.EDWARDS,E.F.PAI, AUTHOR 2 N.Y.CHIRGADZE REVDAT 3 13-JUL-11 2O1B 1 VERSN REVDAT 2 24-FEB-09 2O1B 1 VERSN REVDAT 1 12-DEC-06 2O1B 0 JRNL AUTH T.E.MCGRATH,A.DHARAMSI,D.THAMBIPILLAI,A.M.EDWARDS,E.F.PAI, JRNL AUTH 2 N.Y.CHIRGADZE JRNL TITL STRUCTURE OF AMINOTRANSFERASE FROM STAPHYLOCOCCUS AUREUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.2 REMARK 3 NUMBER OF REFLECTIONS : 21132 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1119 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1262 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 74.33 REMARK 3 BIN R VALUE (WORKING SET) : 0.2110 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.2730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2956 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 271 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.99000 REMARK 3 B22 (A**2) : 1.90000 REMARK 3 B33 (A**2) : -1.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.88000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.235 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.184 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.126 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.200 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3085 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4204 ; 1.250 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 386 ; 5.967 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 146 ;37.064 ;25.342 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 498 ;16.351 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;19.086 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 453 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2397 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1587 ; 0.218 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2119 ; 0.311 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 260 ; 0.154 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 87 ; 0.277 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 28 ; 0.147 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1942 ; 0.511 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3059 ; 0.841 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1299 ; 1.355 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1140 ; 2.020 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 15 REMARK 3 ORIGIN FOR THE GROUP (A): 12.6369 -39.8155 3.9740 REMARK 3 T TENSOR REMARK 3 T11: 0.0528 T22: 0.0828 REMARK 3 T33: 0.0287 T12: 0.0778 REMARK 3 T13: -0.0034 T23: -0.0419 REMARK 3 L TENSOR REMARK 3 L11: 13.4994 L22: 25.7706 REMARK 3 L33: 17.1080 L12: 9.0523 REMARK 3 L13: -9.1994 L23: -11.6335 REMARK 3 S TENSOR REMARK 3 S11: 0.5160 S12: -0.3924 S13: -0.9938 REMARK 3 S21: 0.2531 S22: -0.9441 S23: -1.5964 REMARK 3 S31: -0.0736 S32: 0.7327 S33: 0.4281 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 23 A 384 REMARK 3 ORIGIN FOR THE GROUP (A): 12.8316 -27.6412 -13.1210 REMARK 3 T TENSOR REMARK 3 T11: -0.0657 T22: -0.1191 REMARK 3 T33: -0.1085 T12: 0.0057 REMARK 3 T13: -0.0065 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 1.4470 L22: 0.7591 REMARK 3 L33: 0.8202 L12: -0.5930 REMARK 3 L13: -0.4540 L23: -0.0044 REMARK 3 S TENSOR REMARK 3 S11: 0.0162 S12: 0.0355 S13: 0.0693 REMARK 3 S21: -0.0131 S22: -0.0130 S23: -0.1080 REMARK 3 S31: 0.0122 S32: 0.0641 S33: -0.0032 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2O1B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-NOV-06. REMARK 100 THE RCSB ID CODE IS RCSB040561. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 32-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795, 0.9796, 0.9642 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21132 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.19700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 54.65550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.15350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 54.65550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.15350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER GENERATED BY THE REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 5830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 585 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 486 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 LYS A 16 REMARK 465 THR A 17 REMARK 465 MSE A 18 REMARK 465 GLY A 19 REMARK 465 ARG A 20 REMARK 465 LYS A 21 REMARK 465 ILE A 22 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 537 O HOH A 620 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 12 109.62 -56.69 REMARK 500 ILE A 36 121.18 77.51 REMARK 500 PRO A 37 160.44 -43.89 REMARK 500 ALA A 210 140.66 -174.06 REMARK 500 ARG A 241 65.98 70.56 REMARK 500 ASN A 248 118.18 -36.88 REMARK 500 ASP A 365 126.08 -23.02 REMARK 500 ASP A 366 6.61 -63.24 REMARK 500 GLN A 367 -87.23 -103.28 REMARK 500 LYS A 368 -57.79 -11.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 613 DISTANCE = 8.16 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP A 400 DBREF 2O1B A 2 384 UNP Q5HCZ0 Q5HCZ0_STAAC 2 384 SEQADV 2O1B MSE A -19 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B GLY A -18 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B SER A -17 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B SER A -16 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B HIS A -15 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B HIS A -14 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B HIS A -13 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B HIS A -12 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B HIS A -11 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B HIS A -10 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B SER A -9 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B SER A -8 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B GLY A -7 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B LEU A -6 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B VAL A -5 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B PRO A -4 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B ARG A -3 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B GLY A -2 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B SER A -1 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B HIS A 0 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B MSE A 1 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B MSE A 18 UNP Q5HCZ0 MET 18 MODIFIED RESIDUE SEQADV 2O1B MSE A 32 UNP Q5HCZ0 MET 32 MODIFIED RESIDUE SEQADV 2O1B MSE A 237 UNP Q5HCZ0 MET 237 MODIFIED RESIDUE SEQADV 2O1B MSE A 251 UNP Q5HCZ0 MET 251 MODIFIED RESIDUE SEQADV 2O1B MSE A 266 UNP Q5HCZ0 MET 266 MODIFIED RESIDUE SEQADV 2O1B MSE A 302 UNP Q5HCZ0 MET 302 MODIFIED RESIDUE SEQRES 1 A 404 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 404 LEU VAL PRO ARG GLY SER HIS MSE ILE SER ASN LYS LEU SEQRES 3 A 404 ALA ASN ILE PRO ASP SER TYR PHE GLY LYS THR MSE GLY SEQRES 4 A 404 ARG LYS ILE GLU HIS GLY PRO LEU PRO LEU ILE ASN MSE SEQRES 5 A 404 ALA VAL GLY ILE PRO ASP GLY PRO THR PRO GLN GLY ILE SEQRES 6 A 404 ILE ASP HIS PHE GLN LYS ALA LEU THR ILE PRO GLU ASN SEQRES 7 A 404 GLN LYS TYR GLY ALA PHE HIS GLY LYS GLU ALA PHE LYS SEQRES 8 A 404 GLN ALA ILE VAL ASP PHE TYR GLN ARG GLN TYR ASN VAL SEQRES 9 A 404 THR LEU ASP LYS GLU ASP GLU VAL CYS ILE LEU TYR GLY SEQRES 10 A 404 THR LYS ASN GLY LEU VAL ALA VAL PRO THR CYS VAL ILE SEQRES 11 A 404 ASN PRO GLY ASP TYR VAL LEU LEU PRO ASP PRO GLY TYR SEQRES 12 A 404 THR ASP TYR LEU ALA GLY VAL LEU LEU ALA ASP GLY LYS SEQRES 13 A 404 PRO VAL PRO LEU ASN LEU GLU PRO PRO HIS TYR LEU PRO SEQRES 14 A 404 ASP TRP SER LYS VAL ASP SER GLN ILE ILE ASP LYS THR SEQRES 15 A 404 LYS LEU ILE TYR LEU THR TYR PRO ASN ASN PRO THR GLY SEQRES 16 A 404 SER THR ALA THR LYS GLU VAL PHE ASP GLU ALA ILE ALA SEQRES 17 A 404 LYS PHE LYS GLY THR ASP THR LYS ILE VAL HIS ASP PHE SEQRES 18 A 404 ALA TYR GLY ALA PHE GLY PHE ASP ALA LYS ASN PRO SER SEQRES 19 A 404 ILE LEU ALA SER GLU ASN GLY LYS ASP VAL ALA ILE GLU SEQRES 20 A 404 ILE TYR SER LEU SER LYS GLY TYR ASN MSE SER GLY PHE SEQRES 21 A 404 ARG VAL GLY PHE ALA VAL GLY ASN LYS ASP MSE ILE GLN SEQRES 22 A 404 ALA LEU LYS LYS TYR GLN THR HIS THR ASN ALA GLY MSE SEQRES 23 A 404 PHE GLY ALA LEU GLN ASP ALA ALA ILE TYR ALA LEU ASN SEQRES 24 A 404 HIS TYR ASP ASP PHE LEU GLU GLU GLN SER ASN VAL PHE SEQRES 25 A 404 LYS THR ARG ARG ASP ARG PHE GLU ALA MSE LEU ALA LYS SEQRES 26 A 404 ALA ASP LEU PRO PHE VAL HIS ALA LYS GLY GLY ILE TYR SEQRES 27 A 404 VAL TRP LEU GLU THR PRO PRO GLY TYR ASP SER GLU GLN SEQRES 28 A 404 PHE GLU GLN PHE LEU VAL GLN GLU LYS SER ILE LEU VAL SEQRES 29 A 404 ALA PRO GLY LYS PRO PHE GLY GLU ASN GLY ASN ARG TYR SEQRES 30 A 404 VAL ARG ILE SER LEU ALA LEU ASP ASP GLN LYS LEU ASP SEQRES 31 A 404 GLU ALA ALA ILE ARG LEU THR GLU LEU ALA TYR LEU TYR SEQRES 32 A 404 GLU MODRES 2O1B MSE A 32 MET SELENOMETHIONINE MODRES 2O1B MSE A 237 MET SELENOMETHIONINE MODRES 2O1B MSE A 251 MET SELENOMETHIONINE MODRES 2O1B MSE A 266 MET SELENOMETHIONINE MODRES 2O1B MSE A 302 MET SELENOMETHIONINE HET MSE A 32 8 HET MSE A 237 8 HET MSE A 251 8 HET MSE A 266 8 HET MSE A 302 8 HET PLP A 400 15 HETNAM MSE SELENOMETHIONINE HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 PLP C8 H10 N O6 P FORMUL 3 HOH *271(H2 O) HELIX 1 1 SER A 3 ASN A 8 1 6 HELIX 2 2 PRO A 42 LEU A 53 1 12 HELIX 3 3 ILE A 55 LYS A 60 1 6 HELIX 4 4 LYS A 67 ASN A 83 1 17 HELIX 5 5 GLY A 97 ILE A 110 1 14 HELIX 6 6 ASP A 125 ALA A 133 1 9 HELIX 7 7 ASP A 150 VAL A 154 5 5 HELIX 8 8 ASP A 155 LYS A 161 1 7 HELIX 9 9 THR A 179 LYS A 191 1 13 HELIX 10 10 SER A 214 SER A 218 5 5 HELIX 11 11 ASN A 220 VAL A 224 1 5 HELIX 12 12 MSE A 237 ARG A 241 5 5 HELIX 13 13 ASN A 248 ASN A 263 1 16 HELIX 14 14 PHE A 267 TYR A 281 1 15 HELIX 15 15 TYR A 281 ALA A 306 1 26 HELIX 16 16 ASP A 328 SER A 341 1 14 HELIX 17 17 LYS A 348 ASN A 355 5 8 HELIX 18 18 GLN A 367 GLU A 378 1 12 HELIX 19 19 LEU A 379 GLU A 384 5 6 SHEET 1 A 2 ILE A 30 ASN A 31 0 SHEET 2 A 2 ILE A 342 LEU A 343 1 O LEU A 343 N ILE A 30 SHEET 1 B 7 VAL A 92 LEU A 95 0 SHEET 2 B 7 GLY A 243 GLY A 247 -1 O ALA A 245 N CYS A 93 SHEET 3 B 7 ALA A 225 SER A 230 -1 N GLU A 227 O VAL A 246 SHEET 4 B 7 LYS A 196 ASP A 200 1 N HIS A 199 O ILE A 228 SHEET 5 B 7 THR A 162 LEU A 167 1 N LEU A 167 O ASP A 200 SHEET 6 B 7 TYR A 115 ASP A 120 1 N TYR A 115 O LYS A 163 SHEET 7 B 7 LYS A 136 ASN A 141 1 O LEU A 140 N LEU A 118 SHEET 1 C 4 PHE A 310 VAL A 311 0 SHEET 2 C 4 TYR A 318 GLU A 322 -1 O TRP A 320 N VAL A 311 SHEET 3 C 4 TYR A 357 SER A 361 -1 O VAL A 358 N LEU A 321 SHEET 4 C 4 ALA A 345 PRO A 346 -1 N ALA A 345 O ARG A 359 LINK NZ LYS A 233 C4A PLP A 400 1555 1555 1.79 LINK C ASN A 31 N MSE A 32 1555 1555 1.33 LINK C MSE A 32 N ALA A 33 1555 1555 1.33 LINK C ASN A 236 N MSE A 237 1555 1555 1.33 LINK C MSE A 237 N SER A 238 1555 1555 1.34 LINK C ASP A 250 N MSE A 251 1555 1555 1.33 LINK C MSE A 251 N ILE A 252 1555 1555 1.33 LINK C GLY A 265 N MSE A 266 1555 1555 1.33 LINK C MSE A 266 N PHE A 267 1555 1555 1.33 LINK C ALA A 301 N MSE A 302 1555 1555 1.33 LINK C MSE A 302 N LEU A 303 1555 1555 1.33 CISPEP 1 ASP A 120 PRO A 121 0 5.12 CISPEP 2 PRO A 144 PRO A 145 0 2.97 CISPEP 3 TYR A 169 PRO A 170 0 0.17 CISPEP 4 ASN A 172 PRO A 173 0 21.41 SITE 1 AC1 14 TYR A 61 THR A 98 LYS A 99 LEU A 102 SITE 2 AC1 14 TYR A 123 ASN A 172 ASP A 200 ALA A 202 SITE 3 AC1 14 TYR A 203 SER A 230 SER A 232 LYS A 233 SITE 4 AC1 14 ARG A 241 HOH A 606 CRYST1 109.311 56.307 73.401 90.00 130.31 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009148 0.000000 0.007760 0.00000 SCALE2 0.000000 0.017760 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017865 0.00000 MASTER 372 0 6 19 13 0 4 6 0 0 0 32 END