HEADER RNA 31-AUG-15 2N6X TITLE NMR ASSIGNMENT AND STRUCTURE OF CSSA5 (MIDDLE REGION) OF CSSA TITLE 2 THERMOMETER FROM NEISSERIA MENINGITIDIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA (43-MER); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: NEISSERIA MENINGITIDIS; SOURCE 4 ORGANISM_TAXID: 487 KEYWDS RNA REGULATION, PATHOGEN, RNA THERMOMETER, RNA EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR R.BARNWAL,K.GODIN,G.VARANI REVDAT 2 23-NOV-16 2N6X 1 JRNL REVDAT 1 03-AUG-16 2N6X 0 JRNL AUTH R.P.BARNWAL,E.LOH,K.S.GODIN,J.YIP,H.LAVENDER,C.M.TANG, JRNL AUTH 2 G.VARANI JRNL TITL STRUCTURE AND MECHANISM OF A MOLECULAR RHEOSTAT, AN RNA JRNL TITL 2 THERMOMETER THAT MODULATES IMMUNE EVASION BY NEISSERIA JRNL TITL 3 MENINGITIDIS. JRNL REF NUCLEIC ACIDS RES. V. 44 9426 2016 JRNL REFN ISSN 0305-1048 JRNL PMID 27369378 JRNL DOI 10.1093/NAR/GKW584 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR_NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2N6X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-SEP-15. REMARK 100 THE RCSB ID CODE IS RCSB104498. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 280 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.4-1.1 MM CSSA5 RNA (43-MER), REMARK 210 0.4-1.1 MM 13C/15N-UNIFORMLY REMARK 210 LABELED CSSA5 RNA (43-MER), 0.4- REMARK 210 1.1 MM 13C/15N-AU LABELED CSSA5 REMARK 210 RNA (43-MER), 0.4-1.1 MM REMARK 210 PARTIALLY DEUTERATED CSSA5 RNA REMARK 210 (43-MER), 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 2D 1H-1H TOCSY; 2D DQF-COSY; 2D REMARK 210 1H-1H NOESY; 3D 1H-13C NOESY; 3D REMARK 210 HCCH-TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR_NIH, TOPSPIN, SPARKY REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HO2' U A 26 O4' A A 27 1.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25785 RELATED DB: BMRB REMARK 900 RELATED ID: 2N6S RELATED DB: PDB REMARK 900 RELATED ID: 2N6T RELATED DB: PDB REMARK 900 RELATED ID: 2N6W RELATED DB: PDB DBREF 2N6X A 1 43 PDB 2N6X 2N6X 1 43 SEQRES 1 A 43 G G U G A G U A C G U A G SEQRES 2 A 43 A G U A U A C U U C G G U SEQRES 3 A 43 A U A C U U A U A U A C U SEQRES 4 A 43 U A C C LINK O3' G A 1 P G A 2 1555 1555 1.62 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 89 0 0 0 0 0 0 6 0 0 0 4 END