HEADER PHOTOSYNTHESIS 26-JAN-11 2L8V TITLE SOLUTION NMR STRUCTURE OF THE PHYCOBILISOME LINKER POLYPEPTIDE DOMAIN TITLE 2 OF CPCC (20-153) FROM THERMOSYNECHOCOCCUS ELONGATUS, NORTHEAST TITLE 3 STRUCTURAL GENOMICS CONSORTIUM TARGET TER219A COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHYCOBILISOME 32.1 KDA LINKER POLYPEPTIDE, PHYCOCYANIN- COMPND 3 ASSOCIATED, ROD; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: SEQUENCE DATABASE RESIDUES 20-153; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS ELONGATUS; SOURCE 3 ORGANISM_TAXID: 197221; SOURCE 4 STRAIN: BP-1; SOURCE 5 GENE: CPCC, TLR1959; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) + MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET21-23C KEYWDS NESG, STRUCTURAL GENOMICS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, KEYWDS 2 PHOTOSYNTHESIS EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.A.RAMELOT,Y.YANG,J.R.CORT,D.LEE,C.CICCOSANTI,K.HAMILTON,T.B.ACTON, AUTHOR 2 R.XIAO,J.K.EVERETT,G.T.MONTELIONE,M.A.KENNEDY,NORTHEAST STRUCTURAL AUTHOR 3 GENOMICS CONSORTIUM (NESG) REVDAT 1 09-FEB-11 2L8V 0 JRNL AUTH T.A.RAMELOT,Y.YANG,J.R.CORT,D.LEE,C.CICCOSANTI,K.HAMILTON, JRNL AUTH 2 T.B.ACTON,R.XIAO,J.K.EVERETT,G.T.MONTELIONE,M.A.KENNEDY JRNL TITL SOLUTION NMR STRUCTURE OF THE PHYCOBILISOME LINKER JRNL TITL 2 POLYPEPTIDE DOMAIN OF CPCC (20-153) FROM THERMOSYNECHOCOCCUS JRNL TITL 3 ELONGATUS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET JRNL TITL 4 TER219A JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2, PSVS 1.4 REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ (CNS) REMARK 3 , BHATTACHARYA AND MONTELIONE (PSVS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CNS WATER REFINEMENT REMARK 4 REMARK 4 2L8V COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-FEB-11. REMARK 100 THE RCSB ID CODE IS RCSB102102. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.5 REMARK 210 IONIC STRENGTH : 0.1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.3 MM [U-100% 13C; U-100% 15N] REMARK 210 PROTEIN, 10 MM TRIS-HCL, 100 MM REMARK 210 SODIUM CHLORIDE, 5 MM CALCIUM REMARK 210 CHLORIDE, 0.02 % SODIUM AZIDE, 5 REMARK 210 MM DTT, 90% H2O/10% D2O; 1.3 MM REMARK 210 [U-5% 13C; U-100% 15N] PROTEIN, REMARK 210 10 MM TRIS-HCL, 100 MM SODIUM REMARK 210 CHLORIDE, 5 MM CALCIUM CHLORIDE, REMARK 210 5 MM DTT, 0.02 % SODIUM AZIDE, REMARK 210 90% H2O/10% D2O; 1.3 MM [U-100% REMARK 210 13C; U-100% 15N] PROTEIN, 10 MM REMARK 210 TRIS-HCL, 100 MM SODIUM CHLORIDE, REMARK 210 5 MM CALCIUM CHLORIDE, 0.02 % REMARK 210 SODIUM AZIDE, 10 MM DTT, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 2D 1H-13C HSQC-CT; 3D REMARK 210 1H-15N NOESY; 3D 1H-13C NOESY- REMARK 210 ALIPH; 3D HNCO; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HN(CO)CA; 3D REMARK 210 HBHA(CO)NH; 3D H(CCO)NH; 3D REMARK 210 C(CCO)NH; 3D HCCH-COSY; 3D HCCH- REMARK 210 TOCSY; 3D CCH-TOCSY; 4D CC-NOESY; REMARK 210 2D 1H-13C NOESY-AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 850 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 2008, VNMR 6.1C, TOPSPIN REMARK 210 2.1.4, AUTOSTRUCTURE 2.2.1, X- REMARK 210 PLOR_NIH 2.25, SPARKY 3.113, REMARK 210 AUTOASSIGN 2.30, PDBSTAT 5.1, REMARK 210 PINE_SERVER 1.0, CYANA 2.1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 125 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD1 HIS A 99 OD1 ASP A 111 1.54 REMARK 500 HB3 HIS A 141 H HIS A 142 1.55 REMARK 500 HH TYR A 22 OE2 GLU A 41 1.62 REMARK 500 HZ1 LYS A 60 OD1 ASP A 113 1.63 REMARK 500 HD1 HIS A 140 OXT HIS A 143 1.66 REMARK 500 HZ2 LYS A 60 OD2 ASP A 109 1.66 REMARK 500 HG SER A 34 OE2 GLU A 62 1.66 REMARK 500 OE1 GLU A 15 HH12 ARG A 45 1.67 REMARK 500 OD2 ASP A 92 HG SER A 94 1.69 REMARK 500 H ASP A 92 OE1 GLU A 95 1.70 REMARK 500 O VAL A 3 H VAL A 130 1.73 REMARK 500 HE ARG A 23 OE1 GLU A 35 1.73 REMARK 500 O VAL A 38 HG SER A 42 1.74 REMARK 500 H THR A 50 OE1 GLU A 53 1.75 REMARK 500 O SER A 118 HG1 THR A 122 1.75 REMARK 500 O VAL A 58 HG SER A 61 1.75 REMARK 500 O GLU A 11 H GLU A 15 1.76 REMARK 500 O SER A 42 HD21 ASN A 46 1.79 REMARK 500 O ASN A 81 H LEU A 85 1.80 REMARK 500 HH11 ARG A 88 OH TYR A 91 1.80 REMARK 500 O GLU A 11 HG2 GLU A 15 1.81 REMARK 500 OE2 GLU A 11 HH21 ARG A 45 1.82 REMARK 500 O ILE A 78 H TYR A 82 1.82 REMARK 500 O LEU A 37 H GLU A 41 1.82 REMARK 500 O LEU A 102 H GLU A 106 1.82 REMARK 500 O PRO A 119 HD21 ASN A 123 1.83 REMARK 500 O GLY A 87 H ARG A 134 1.85 REMARK 500 O PHE A 73 H VAL A 77 1.85 REMARK 500 H TYR A 91 OE1 GLU A 95 1.85 REMARK 500 O HIS A 99 H TYR A 103 1.85 REMARK 500 OH TYR A 22 H LEU A 37 1.86 REMARK 500 H LEU A 5 O TRP A 128 1.86 REMARK 500 OE2 GLU A 15 HH22 ARG A 45 1.86 REMARK 500 O SER A 94 H PHE A 98 1.87 REMARK 500 O VAL A 51 H VAL A 55 1.87 REMARK 500 O GLU A 12 HG1 THR A 16 1.87 REMARK 500 O GLU A 93 H ILE A 97 1.88 REMARK 500 OE1 GLU A 4 HE ARG A 6 1.89 REMARK 500 O VAL A 96 H LEU A 100 1.89 REMARK 500 O LEU A 14 H ILE A 18 1.90 REMARK 500 HG1 THR A 50 OE1 GLU A 53 1.91 REMARK 500 HD2 TYR A 82 O ARG A 88 1.92 REMARK 500 O ALA A 40 H LEU A 44 1.92 REMARK 500 HH12 ARG A 23 OE2 GLU A 66 1.92 REMARK 500 O ARG A 76 H LEU A 80 1.93 REMARK 500 OE2 GLU A 4 HH21 ARG A 6 1.93 REMARK 500 O GLU A 79 H LYS A 83 1.94 REMARK 500 O GLU A 41 H ARG A 45 1.94 REMARK 500 O LEU A 43 H LYS A 48 1.94 REMARK 500 O ILE A 18 H TYR A 22 1.95 REMARK 500 REMARK 500 THIS ENTRY HAS 1965 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 MET A 32 -167.30 61.82 REMARK 500 1 ALA A 33 79.50 -105.03 REMARK 500 1 SER A 34 24.33 49.97 REMARK 500 1 LEU A 37 65.96 -105.68 REMARK 500 1 SER A 61 -70.41 -55.65 REMARK 500 1 LEU A 63 108.20 -51.92 REMARK 500 1 GLU A 66 -75.72 -99.11 REMARK 500 1 LYS A 67 -48.95 -131.36 REMARK 500 1 LEU A 69 -70.24 -178.03 REMARK 500 1 SER A 118 109.63 -50.09 REMARK 500 1 HIS A 141 -95.76 53.13 REMARK 500 1 HIS A 142 20.73 -159.50 REMARK 500 2 VAL A 3 98.94 -69.48 REMARK 500 2 ALA A 7 36.46 -74.30 REMARK 500 2 ASN A 8 77.26 -168.97 REMARK 500 2 LEU A 26 -44.62 -173.07 REMARK 500 2 ASP A 29 47.92 -81.91 REMARK 500 2 VAL A 31 -76.43 -59.46 REMARK 500 2 MET A 32 -32.40 72.50 REMARK 500 2 ALA A 33 161.96 71.97 REMARK 500 2 ARG A 36 33.76 -91.36 REMARK 500 2 GLU A 66 -59.57 -122.99 REMARK 500 2 ASN A 72 -166.10 -125.81 REMARK 500 2 ARG A 134 46.11 -77.80 REMARK 500 2 GLU A 137 112.51 -165.05 REMARK 500 2 HIS A 142 -74.46 -66.73 REMARK 500 3 VAL A 3 98.80 -67.35 REMARK 500 3 ASP A 29 95.86 -64.72 REMARK 500 3 TYR A 30 -42.02 -178.53 REMARK 500 3 MET A 32 -165.02 -70.34 REMARK 500 3 ALA A 33 -42.36 76.58 REMARK 500 3 GLU A 62 -64.20 69.48 REMARK 500 3 LYS A 65 79.49 63.65 REMARK 500 3 LYS A 67 -48.53 73.91 REMARK 500 3 PHE A 68 83.12 -172.19 REMARK 500 3 TYR A 70 -175.69 68.70 REMARK 500 3 ASN A 72 -60.27 -166.61 REMARK 500 3 PRO A 131 93.88 -58.87 REMARK 500 3 ARG A 134 -72.61 -72.43 REMARK 500 4 ARG A 6 -168.67 -123.08 REMARK 500 4 ASN A 8 33.48 -85.25 REMARK 500 4 TYR A 22 -87.84 -102.20 REMARK 500 4 GLN A 24 -81.73 -65.71 REMARK 500 4 VAL A 25 48.71 -109.04 REMARK 500 4 MET A 32 -75.97 63.44 REMARK 500 4 ALA A 33 -40.84 -139.95 REMARK 500 4 SER A 34 70.70 49.42 REMARK 500 4 GLU A 62 176.74 65.24 REMARK 500 4 LEU A 63 -19.43 72.18 REMARK 500 4 TYR A 64 -177.15 81.34 REMARK 500 REMARK 500 THIS ENTRY HAS 257 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17429 RELATED DB: BMRB REMARK 900 RELATED ID: TER219A RELATED DB: TARGETDB DBREF 2L8V A 2 135 UNP P50034 PYR1_THEEB 20 153 SEQADV 2L8V MET A 1 UNP P50034 INITIATING METHIONINE SEQADV 2L8V LEU A 136 UNP P50034 EXPRESSION TAG SEQADV 2L8V GLU A 137 UNP P50034 EXPRESSION TAG SEQADV 2L8V HIS A 138 UNP P50034 EXPRESSION TAG SEQADV 2L8V HIS A 139 UNP P50034 EXPRESSION TAG SEQADV 2L8V HIS A 140 UNP P50034 EXPRESSION TAG SEQADV 2L8V HIS A 141 UNP P50034 EXPRESSION TAG SEQADV 2L8V HIS A 142 UNP P50034 EXPRESSION TAG SEQADV 2L8V HIS A 143 UNP P50034 EXPRESSION TAG SEQRES 1 A 143 MET PRO VAL GLU LEU ARG ALA ASN TRP SER GLU GLU ASP SEQRES 2 A 143 LEU GLU THR VAL ILE ARG ALA VAL TYR ARG GLN VAL LEU SEQRES 3 A 143 GLY ASN ASP TYR VAL MET ALA SER GLU ARG LEU VAL SER SEQRES 4 A 143 ALA GLU SER LEU LEU ARG ASN GLY LYS ILE THR VAL ARG SEQRES 5 A 143 GLU PHE VAL ARG ALA VAL ALA LYS SER GLU LEU TYR LYS SEQRES 6 A 143 GLU LYS PHE LEU TYR GLY ASN PHE GLN THR ARG VAL ILE SEQRES 7 A 143 GLU LEU ASN TYR LYS HIS LEU LEU GLY ARG ALA PRO TYR SEQRES 8 A 143 ASP GLU SER GLU VAL ILE PHE HIS LEU ASP LEU TYR GLU SEQRES 9 A 143 ASN GLU GLY PHE ASP ALA ASP ILE ASP SER TYR ILE ASP SEQRES 10 A 143 SER PRO GLU TYR THR ASN SER PHE GLY ASP TRP VAL VAL SEQRES 11 A 143 PRO TYR TYR ARG GLY LEU GLU HIS HIS HIS HIS HIS HIS HELIX 1 1 SER A 10 TYR A 22 1 13 HELIX 2 2 LEU A 37 ASN A 46 1 10 HELIX 3 3 THR A 50 LYS A 60 1 11 HELIX 4 4 PHE A 73 LEU A 86 1 14 HELIX 5 5 ASP A 92 GLU A 106 1 15 HELIX 6 6 GLY A 107 SER A 118 1 12 HELIX 7 7 SER A 118 GLY A 126 1 9 SHEET 1 A 2 VAL A 3 GLU A 4 0 SHEET 2 A 2 VAL A 129 VAL A 130 -1 O VAL A 130 N VAL A 3 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 224 0 0 7 2 0 0 6 0 0 0 11 END