HEADER TRANSCRIPTION 07-OCT-10 2L4J TITLE YAP WW2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: YES-ASSOCIATED PROTEIN 2 (YAP2); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYZIAS LATIPES; SOURCE 3 ORGANISM_COMMON: BONY FISHES, MEDAKA; SOURCE 4 ORGANISM_TAXID: 8090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PSV281 KEYWDS WW DOMAIN, YAP, MEDAKA, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 21 AUTHOR C.WEBB,A.UPADHYAY,M.FURUTANI-SEIKI,S.BAGBY REVDAT 3 05-FEB-20 2L4J 1 REMARK REVDAT 2 08-JUN-11 2L4J 1 JRNL REVDAT 1 03-NOV-10 2L4J 0 JRNL AUTH C.WEBB,A.UPADHYAY,F.GIUNTINI,I.EGGLESTON,M.FURUTANI-SEIKI, JRNL AUTH 2 R.ISHIMA,S.BAGBY JRNL TITL STRUCTURAL FEATURES AND LIGAND BINDING PROPERTIES OF TANDEM JRNL TITL 2 WW DOMAINS FROM YAP AND TAZ, NUCLEAR EFFECTORS OF THE HIPPO JRNL TITL 3 PATHWAY. JRNL REF BIOCHEMISTRY V. 50 3300 2011 JRNL REFN ISSN 0006-2960 JRNL PMID 21417403 JRNL DOI 10.1021/BI2001888 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, X-PLOR NIH REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), SCHWIETERS, KUSZEWSKI, TJANDRA AND REMARK 3 CLORE (X-PLOR NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2L4J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1000101947. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : 0.2 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 50 MM POTASSIUM PHOSPHATE, 200 REMARK 210 MM SODIUM CHLORIDE, 5 MM EDTA, REMARK 210 400-600 MM [U-15N] YAP WW2 REMARK 210 PROTEIN, 93% H2O/7% D2O; 50 MM REMARK 210 POTASSIUM PHOSPHATE, 200 MM REMARK 210 SODIUM CHLORIDE, 5 MM EDTA, 400- REMARK 210 600 MM [U-13C; U-15N] YAP WW2 REMARK 210 PROTEIN, 93% H2O/7% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-15N TOCSY; REMARK 210 3D 1H-15N NOESY; 3D CBCA(CO)NH; REMARK 210 3D HNCO; 3D HNCACB; 3D C(CO)NH; REMARK 210 3D HN(CO)CA; 3D HCCH-COSY; 3D REMARK 210 HCCH-TOCSY; 3D HNHA; 3D HBHA(CO) REMARK 210 NH REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : UNITY INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CCPN_ANALYSIS, X-PLOR NIH REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 21 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 178 -61.00 -28.63 REMARK 500 1 ASN A 180 -35.93 171.60 REMARK 500 1 PRO A 183 34.45 -65.67 REMARK 500 1 ALA A 184 -17.77 -140.57 REMARK 500 1 TRP A 192 85.35 -154.42 REMARK 500 1 ASP A 216 161.92 -44.10 REMARK 500 1 PRO A 217 179.78 -50.93 REMARK 500 1 GLU A 220 -88.71 44.15 REMARK 500 1 THR A 221 76.73 136.96 REMARK 500 2 SER A 182 68.91 -179.39 REMARK 500 2 ALA A 184 20.94 -173.27 REMARK 500 2 TRP A 192 82.86 -161.78 REMARK 500 2 HIS A 207 11.42 -69.17 REMARK 500 2 ASN A 209 13.68 -158.28 REMARK 500 2 ASP A 216 177.28 -45.88 REMARK 500 2 LEU A 219 69.51 -112.98 REMARK 500 3 ALA A 184 1.55 -169.62 REMARK 500 3 TRP A 192 85.67 -160.00 REMARK 500 3 ASN A 209 8.87 -158.06 REMARK 500 3 ASP A 216 106.02 -46.24 REMARK 500 3 THR A 221 134.29 -172.31 REMARK 500 4 SER A 178 53.75 -163.89 REMARK 500 4 ASN A 180 73.33 -164.21 REMARK 500 4 SER A 182 77.08 46.92 REMARK 500 4 ALA A 184 -20.11 -167.68 REMARK 500 4 TRP A 192 86.38 -162.23 REMARK 500 4 HIS A 207 0.36 -60.30 REMARK 500 4 ASN A 209 24.42 -160.56 REMARK 500 4 TRP A 214 61.02 -101.40 REMARK 500 4 ASP A 216 175.94 -47.15 REMARK 500 4 LEU A 219 76.18 -109.57 REMARK 500 4 GLU A 220 76.21 -67.40 REMARK 500 4 THR A 221 36.49 37.62 REMARK 500 5 SER A 182 74.77 -176.69 REMARK 500 5 ALA A 184 1.43 -174.85 REMARK 500 5 TRP A 192 84.47 -157.09 REMARK 500 5 ASN A 209 8.60 -161.48 REMARK 500 5 LEU A 215 143.81 -39.03 REMARK 500 5 THR A 221 37.97 38.11 REMARK 500 6 SER A 178 156.44 176.32 REMARK 500 6 SER A 181 58.69 -93.85 REMARK 500 6 SER A 182 153.70 58.85 REMARK 500 6 ALA A 184 5.22 -169.52 REMARK 500 6 TRP A 192 84.29 -155.52 REMARK 500 6 ASN A 209 6.32 -156.46 REMARK 500 6 LEU A 215 109.23 -40.51 REMARK 500 6 ASP A 216 177.56 -48.06 REMARK 500 6 GLU A 220 12.36 -148.27 REMARK 500 7 ALA A 184 42.59 -174.11 REMARK 500 7 TRP A 192 83.53 -161.58 REMARK 500 REMARK 500 THIS ENTRY HAS 161 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17241 RELATED DB: BMRB DBREF 2L4J A 177 222 PDB 2L4J 2L4J 177 222 SEQRES 1 A 46 GLY SER PRO ASN SER SER PRO ALA SER GLY PRO LEU PRO SEQRES 2 A 46 GLU GLY TRP GLU GLN ALA ILE THR PRO GLU GLY GLU ILE SEQRES 3 A 46 TYR TYR ILE ASN HIS LYS ASN LYS THR THR SER TRP LEU SEQRES 4 A 46 ASP PRO ARG LEU GLU THR ARG SHEET 1 A 3 GLU A 193 ILE A 196 0 SHEET 2 A 3 ILE A 202 ASN A 206 -1 O TYR A 203 N ALA A 195 SHEET 3 A 3 THR A 211 SER A 213 -1 O THR A 211 N ASN A 206 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 159 0 0 0 3 0 0 6 0 0 0 4 END