HEADER TRANSPORT PROTEIN 29-SEP-09 2KOS TITLE NMR SOLUTION STRUCTURES OF OCTANOYL-ACP FROM STREPTOMYCES COELICOLOR TITLE 2 FATTY ACID SYNTHASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACYL CARRIER PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES COELICOLOR; SOURCE 3 ORGANISM_TAXID: 1902; SOURCE 4 GENE: ACPP, SCO2389, SC4A7.17; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: SC-APOFAS-PET21 KEYWDS ACYL CARRIER PROTEIN, INTERMEDIATE BINDING, FATTY ACID SYNTHASE, KEYWDS 2 TRANSPORT PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR E.PLOSKON,C.ARTHUR,M.P.CRUMP REVDAT 1 18-AUG-10 2KOS 0 JRNL AUTH E.PLOSKON,C.J.ARTHUR,A.L.KANARI,P.WATTANA-AMORN,C.WILLIAMS, JRNL AUTH 2 J.CROSBY,T.J.SIMPSON,C.L.WILLIS,M.P.CRUMP JRNL TITL RECOGNITION OF INTERMEDIATE FUNCTIONALITY BY ACYL CARRIER JRNL TITL 2 PROTEIN OVER A COMPLETE CYCLE OF FATTY ACID BIOSYNTHESIS JRNL REF CHEM.BIOL. V. 17 776 2010 JRNL REFN ISSN 1074-5521 JRNL PMID 20659690 JRNL DOI 10.1016/J.CHEMBIOL.2010.05.024 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 1.2 REMARK 3 AUTHORS : LINGE, O'DONOGHUE, NILGES REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 20 BEST STRUCTURES FROM LAST ITERATION REMARK 3 WERE SELECTED FOR WATER REFINEMENT. WATER REFINED STRUCTURES WERE REMARK 3 CALCULATED USING THE SLIGHTLY MODIFIED REFINEMENT SCRIPT APPLIED REMARK 3 TO THE RECOORD DATABASE. REMARK 4 REMARK 4 2KOS COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-OCT-09. REMARK 100 THE RCSB ID CODE IS RCSB101385. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 50MM POTASSIUM PHOSPHATE-1, REMARK 210 0.5MM SODIUM AZIDE-2, 1MM REMARK 210 OCTANOYL PHOSPHOPANTETHEINE-3, REMARK 210 1MM [U-99% 13C; U-99% 15N] ACP-4, REMARK 210 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D CBCA(CO)NH; REMARK 210 3D HNCACB; 3D HCCH-TOCSY; 3D 1H- REMARK 210 15N NOESY; 3D 1H-13C NOESY; 2D REMARK 210 13C,15N FILTERED NOESY; 2D 13C, REMARK 210 15N FILTERED TOCSY; 2D F2 13C REMARK 210 FILTERED NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ARIA 1.2, NMRPIPE, CCPN_ANALYSIS REMARK 210 1.0 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 27 -164.85 -113.62 REMARK 500 1 THR A 33 36.10 -92.45 REMARK 500 1 ASP A 34 -50.89 -140.89 REMARK 500 1 LEU A 36 -166.26 -112.42 REMARK 500 1 VAL A 38 75.92 65.82 REMARK 500 1 SER A 40 -102.61 56.13 REMARK 500 1 LYS A 67 -83.20 -122.69 REMARK 500 2 LYS A 27 -165.43 -118.00 REMARK 500 2 VAL A 56 -169.88 -122.09 REMARK 500 2 LYS A 67 -52.77 -145.86 REMARK 500 3 LYS A 67 -56.26 -137.43 REMARK 500 3 HIS A 79 -62.56 -102.23 REMARK 500 3 GLN A 80 -174.45 46.24 REMARK 500 4 ASP A 34 -42.93 -170.19 REMARK 500 4 ASP A 55 -12.45 76.57 REMARK 500 4 LYS A 67 -59.60 -139.97 REMARK 500 4 GLN A 80 105.43 49.80 REMARK 500 5 ASP A 34 -54.14 -173.54 REMARK 500 5 ASP A 37 71.75 -102.92 REMARK 500 5 ASP A 39 -77.55 -59.65 REMARK 500 5 SER A 40 -72.83 -179.17 REMARK 500 5 LYS A 67 -72.84 -130.60 REMARK 500 6 SER A 40 -51.05 157.87 REMARK 500 6 LYS A 67 -80.46 -139.72 REMARK 500 7 LYS A 67 -73.39 -130.36 REMARK 500 8 ASP A 34 -43.28 -133.93 REMARK 500 8 LEU A 36 -163.75 -111.36 REMARK 500 8 VAL A 38 84.46 76.08 REMARK 500 8 LYS A 67 -60.61 -143.45 REMARK 500 9 PHE A 32 24.33 -71.37 REMARK 500 9 THR A 33 -48.34 -172.48 REMARK 500 9 SER A 40 -71.25 61.93 REMARK 500 9 LYS A 57 101.62 -167.08 REMARK 500 9 LYS A 67 -55.32 -158.48 REMARK 500 10 ALA A 2 -156.83 -140.76 REMARK 500 10 VAL A 26 93.46 -68.53 REMARK 500 10 ASP A 34 -61.76 -128.42 REMARK 500 10 LYS A 67 -62.82 -131.03 REMARK 500 10 GLN A 80 -177.14 60.65 REMARK 500 11 ASP A 34 -63.43 -136.80 REMARK 500 11 ASP A 37 37.99 -98.93 REMARK 500 11 VAL A 38 -169.48 -105.85 REMARK 500 11 LYS A 67 -71.84 -148.75 REMARK 500 12 ASP A 29 32.61 -90.61 REMARK 500 12 ASP A 55 50.13 70.41 REMARK 500 12 LYS A 67 -58.25 -143.71 REMARK 500 13 ASP A 29 36.91 -81.65 REMARK 500 13 ASP A 34 -61.38 -137.03 REMARK 500 13 ASP A 37 40.71 -93.90 REMARK 500 13 ASP A 55 68.81 69.79 REMARK 500 REMARK 500 THIS ENTRY HAS 82 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 2 TYR A 75 0.05 SIDE CHAIN REMARK 500 4 TYR A 75 0.06 SIDE CHAIN REMARK 500 6 TYR A 75 0.08 SIDE CHAIN REMARK 500 8 TYR A 75 0.07 SIDE CHAIN REMARK 500 12 TYR A 75 0.07 SIDE CHAIN REMARK 500 13 TYR A 75 0.06 SIDE CHAIN REMARK 500 14 TYR A 75 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 13 SER A 40 23.1 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 1 SXO A 101 REMARK 610 2 SXO A 101 REMARK 610 3 SXO A 101 REMARK 610 4 SXO A 101 REMARK 610 5 SXO A 101 REMARK 610 6 SXO A 101 REMARK 610 7 SXO A 101 REMARK 610 8 SXO A 101 REMARK 610 9 SXO A 101 REMARK 610 10 SXO A 101 REMARK 610 11 SXO A 101 REMARK 610 12 SXO A 101 REMARK 610 13 SXO A 101 REMARK 610 14 SXO A 101 REMARK 610 15 SXO A 101 REMARK 610 16 SXO A 101 REMARK 610 17 SXO A 101 REMARK 610 18 SXO A 101 REMARK 610 19 SXO A 101 REMARK 610 20 SXO A 101 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SXO A 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2KOO RELATED DB: PDB REMARK 900 ACP WITH OTHER BOUND INTERMEDIATE REMARK 900 RELATED ID: 2KOP RELATED DB: PDB REMARK 900 ACP WITH OTHER BOUND INTERMEDIATE REMARK 900 RELATED ID: 2KOQ RELATED DB: PDB REMARK 900 ACP WITH OTHER BOUND INTERMEDIATE REMARK 900 RELATED ID: 2KOR RELATED DB: PDB REMARK 900 ACP WITH OTHER BOUND INTERMEDIATE DBREF 2KOS A 1 81 UNP P72393 P72393_STRCO 2 82 SEQRES 1 A 81 ALA ALA THR GLN GLU GLU ILE VAL ALA GLY LEU ALA GLU SEQRES 2 A 81 ILE VAL ASN GLU ILE ALA GLY ILE PRO VAL GLU ASP VAL SEQRES 3 A 81 LYS LEU ASP LYS SER PHE THR ASP ASP LEU ASP VAL ASP SEQRES 4 A 81 SER LEU SER MET VAL GLU VAL VAL VAL ALA ALA GLU GLU SEQRES 5 A 81 ARG PHE ASP VAL LYS ILE PRO ASP ASP ASP VAL LYS ASN SEQRES 6 A 81 LEU LYS THR VAL GLY ASP ALA THR LYS TYR ILE LEU ASP SEQRES 7 A 81 HIS GLN ALA HET SXO A 101 65 HETNAM SXO S-[2-({N-[(2S)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY) HETNAM 2 SXO BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] OCTANETHIOATE FORMUL 2 SXO C19 H37 N2 O8 P S HELIX 1 1 THR A 3 ALA A 19 1 17 HELIX 2 2 SER A 31 LEU A 36 1 6 HELIX 3 3 ASP A 39 LEU A 41 5 3 HELIX 4 4 SER A 42 PHE A 54 1 13 HELIX 5 5 PRO A 59 LEU A 66 1 8 HELIX 6 6 THR A 68 GLN A 80 1 13 LINK OG SER A 40 P24 SXO A 101 1555 1555 1.54 SITE 1 AC1 11 PHE A 32 THR A 33 SER A 40 LEU A 41 SITE 2 AC1 11 MET A 43 VAL A 44 VAL A 47 VAL A 63 SITE 3 AC1 11 LYS A 64 LEU A 66 LYS A 67 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 207 0 1 6 0 0 3 6 0 0 0 7 END