HEADER SIGNALING PROTEIN 22-FEB-09 2KFJ TITLE SOLUTION STRUCTURE OF THE LOOP DELETION MUTANT OF PB1 DOMAIN TITLE 2 OF CDC24P COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL DIVISION CONTROL PROTEIN 24; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PB1 DOMAIN; COMPND 5 SYNONYM: CALCIUM REGULATORY PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: CDC24, CLS4, YAL041W; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PGEX-6P KEYWDS PB1, CDC24P, YEAST, GUANINE-NUCLEOTIDE RELEASING FACTOR, KEYWDS 2 PHOSPHOPROTEIN, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.OGURA,T.TANDAI,S.YOSHINAGA,Y.KOBASHIGAWA,H.KUMETA, AUTHOR 2 F.INAGAKI REVDAT 1 06-OCT-09 2KFJ 0 JRNL AUTH K.OGURA,T.TANDAI,S.YOSHINAGA,Y.KOBASHIGAWA, JRNL AUTH 2 H.KUMETA,T.ITO,H.SUMIMOTO,F.INAGAKI JRNL TITL NMR STRUCTURE OF THE HETERODIMER OF BEM1 AND CDC24 JRNL TITL 2 PB1 DOMAINS FROM SACCHAROMYCES CEREVISIAE JRNL REF J.BIOCHEM. V. 146 317 2009 JRNL REFN ISSN 0021-924X JRNL PMID 19451149 JRNL DOI 10.1093/JB/MVP075 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KFJ COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-FEB-09. REMARK 100 THE RCSB ID CODE IS RCSB101058. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 150 SODIUM CHLORIDE REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.0MM [U-99% 13C; U-99% 15N] REMARK 210 PB1-DOMAIN, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-13C REMARK 210 NOESY; 2D 1H-15N HSQC; 3D REMARK 210 HNCO; 3D HNCACB REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.0 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 13 18.59 -144.68 REMARK 500 1 ASN A 25 -178.89 -50.77 REMARK 500 1 ASP A 27 -72.89 -66.03 REMARK 500 1 SER A 43 97.40 -170.17 REMARK 500 1 PRO A 44 -162.23 -74.94 REMARK 500 2 LEU A 2 -74.73 -93.58 REMARK 500 2 SER A 4 -173.53 -170.94 REMARK 500 2 SER A 13 14.99 89.90 REMARK 500 2 TRP A 24 153.94 -45.77 REMARK 500 2 ASP A 27 -73.87 -74.85 REMARK 500 2 SER A 43 142.03 159.61 REMARK 500 2 PRO A 44 -161.96 -75.04 REMARK 500 3 SER A 13 12.43 90.19 REMARK 500 3 GLU A 14 -166.71 -101.27 REMARK 500 3 SER A 38 -30.11 -39.35 REMARK 500 3 HIS A 41 43.36 -99.99 REMARK 500 3 SER A 43 95.23 -175.27 REMARK 500 3 PRO A 44 -162.19 -74.97 REMARK 500 3 THR A 46 36.36 -99.51 REMARK 500 4 ARG A 8 77.38 -106.25 REMARK 500 4 ILE A 9 108.77 -47.16 REMARK 500 4 LEU A 18 119.81 -165.39 REMARK 500 4 TRP A 24 100.47 -58.50 REMARK 500 4 ASN A 25 -174.55 -55.26 REMARK 500 4 SER A 43 141.31 159.88 REMARK 500 4 PRO A 44 -162.23 -75.03 REMARK 500 5 ASN A 12 -29.08 -39.65 REMARK 500 5 SER A 13 -95.47 -72.86 REMARK 500 5 TRP A 24 93.06 -54.51 REMARK 500 5 ASN A 25 176.90 -51.40 REMARK 500 5 ASP A 27 -71.99 -62.91 REMARK 500 5 HIS A 41 31.09 -92.55 REMARK 500 5 SER A 43 93.83 174.04 REMARK 500 5 PRO A 44 -162.20 -75.03 REMARK 500 6 ASN A 12 -29.50 -39.11 REMARK 500 6 SER A 13 -76.18 -71.80 REMARK 500 6 GLU A 14 -159.11 -170.08 REMARK 500 6 TRP A 24 105.41 -58.31 REMARK 500 6 ASN A 25 -178.68 -62.89 REMARK 500 6 ASP A 27 -73.00 -66.89 REMARK 500 6 SER A 38 -34.09 -39.50 REMARK 500 6 SER A 43 93.85 -175.19 REMARK 500 6 PRO A 44 -162.22 -74.96 REMARK 500 6 THR A 46 35.04 -91.63 REMARK 500 7 ASN A 12 -29.22 -39.77 REMARK 500 7 SER A 13 -95.67 -73.35 REMARK 500 7 TRP A 24 94.49 -55.94 REMARK 500 7 ASN A 25 176.05 -53.80 REMARK 500 7 SER A 43 141.40 159.85 REMARK 500 7 PRO A 44 -162.22 -74.95 REMARK 500 8 ARG A 8 109.80 -59.14 REMARK 500 8 TYR A 11 -168.29 -109.40 REMARK 500 8 SER A 13 19.41 -145.23 REMARK 500 8 SER A 43 84.31 -169.14 REMARK 500 8 PRO A 44 -162.33 -74.97 REMARK 500 9 ASN A 12 -28.81 -39.78 REMARK 500 9 SER A 13 -95.42 -74.96 REMARK 500 9 LEU A 19 97.98 -67.64 REMARK 500 9 TRP A 24 91.84 -60.78 REMARK 500 9 ASN A 25 178.84 -51.90 REMARK 500 9 PRO A 44 -162.23 -74.96 REMARK 500 10 ASN A 12 -29.54 -38.81 REMARK 500 10 SER A 13 -92.89 -70.47 REMARK 500 10 GLU A 14 -154.49 -140.85 REMARK 500 10 ASN A 25 175.89 -52.71 REMARK 500 10 SER A 43 93.84 -161.85 REMARK 500 10 PRO A 44 -162.23 -74.99 REMARK 500 10 ASN A 77 29.61 40.96 REMARK 500 11 ILE A 9 163.87 -48.36 REMARK 500 11 SER A 13 -90.33 -70.00 REMARK 500 11 TRP A 24 96.77 -56.32 REMARK 500 11 ASN A 25 174.29 -55.89 REMARK 500 11 ASP A 27 -70.27 -72.57 REMARK 500 11 HIS A 41 38.66 -91.54 REMARK 500 11 SER A 43 93.91 177.07 REMARK 500 11 PRO A 44 -162.26 -74.96 REMARK 500 12 LEU A 2 28.94 41.82 REMARK 500 12 ASN A 12 -29.67 -38.97 REMARK 500 12 SER A 13 -80.48 -75.79 REMARK 500 12 GLU A 14 -158.78 -166.39 REMARK 500 12 TRP A 24 102.73 -55.90 REMARK 500 12 ASN A 39 -71.72 -41.39 REMARK 500 12 PRO A 44 -162.28 -74.98 REMARK 500 13 ASN A 12 -29.32 -38.91 REMARK 500 13 SER A 13 -83.33 -68.16 REMARK 500 13 ASN A 25 -179.82 -52.30 REMARK 500 13 SER A 38 -30.01 -39.30 REMARK 500 13 SER A 43 141.25 159.84 REMARK 500 13 PRO A 44 -162.18 -75.01 REMARK 500 14 ASN A 12 -29.36 -39.64 REMARK 500 14 SER A 13 -92.34 -78.84 REMARK 500 14 TRP A 24 105.87 -51.58 REMARK 500 14 ASN A 25 -179.79 -61.78 REMARK 500 14 SER A 43 93.95 -168.10 REMARK 500 14 PRO A 44 -162.14 -75.01 REMARK 500 15 ASN A 12 -29.81 -38.46 REMARK 500 15 SER A 13 -89.76 -69.81 REMARK 500 15 TRP A 24 89.17 -58.87 REMARK 500 15 ASN A 25 177.47 -52.86 REMARK 500 15 ASP A 27 -71.69 -61.21 REMARK 500 15 SER A 43 92.96 179.63 REMARK 500 15 PRO A 44 -162.26 -74.93 REMARK 500 16 SER A 13 12.48 91.62 REMARK 500 16 SER A 38 -29.99 -39.44 REMARK 500 16 SER A 43 117.03 171.78 REMARK 500 16 PRO A 44 -162.18 -74.99 REMARK 500 16 THR A 46 41.94 -104.73 REMARK 500 16 LYS A 47 110.16 -174.52 REMARK 500 17 ASN A 12 -30.19 -38.10 REMARK 500 17 SER A 13 -90.82 -69.56 REMARK 500 17 ASN A 25 177.30 -52.61 REMARK 500 17 ILE A 42 -46.15 -130.29 REMARK 500 17 PRO A 44 -162.19 -75.05 REMARK 500 17 LYS A 47 132.76 -174.46 REMARK 500 18 TRP A 24 154.72 -45.23 REMARK 500 18 HIS A 41 44.36 -88.90 REMARK 500 18 SER A 43 93.58 -174.51 REMARK 500 18 PRO A 44 -162.26 -74.95 REMARK 500 19 SER A 13 1.81 92.95 REMARK 500 19 SER A 43 94.15 167.27 REMARK 500 19 PRO A 44 -162.23 -75.01 REMARK 500 20 SER A 4 -175.23 -171.26 REMARK 500 20 TYR A 11 46.54 -101.68 REMARK 500 20 ASN A 12 17.04 54.95 REMARK 500 20 SER A 13 -89.81 -142.35 REMARK 500 20 ASN A 25 -178.92 -55.53 REMARK 500 20 HIS A 41 31.53 80.73 REMARK 500 20 ILE A 42 -75.77 -102.58 REMARK 500 20 PRO A 44 -162.26 -75.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Q1O RELATED DB: PDB DBREF 2KFJ A 4 86 UNP P11433 CDC24_YEAST 761 854 SEQADV 2KFJ GLY A 0 UNP P11433 EXPRESSION TAG SEQADV 2KFJ PRO A 1 UNP P11433 EXPRESSION TAG SEQADV 2KFJ LEU A 2 UNP P11433 EXPRESSION TAG SEQADV 2KFJ GLY A 3 UNP P11433 EXPRESSION TAG SEQADV 2KFJ A UNP P11433 ASN 770 DELETION SEQADV 2KFJ A UNP P11433 ASN 771 DELETION SEQADV 2KFJ A UNP P11433 SER 772 DELETION SEQADV 2KFJ A UNP P11433 ASN 773 DELETION SEQADV 2KFJ A UNP P11433 ASN 774 DELETION SEQADV 2KFJ A UNP P11433 THR 775 DELETION SEQADV 2KFJ A UNP P11433 SER 776 DELETION SEQADV 2KFJ A UNP P11433 SER 777 DELETION SEQADV 2KFJ A UNP P11433 ASN 807 DELETION SEQADV 2KFJ A UNP P11433 ASN 808 DELETION SEQADV 2KFJ A UNP P11433 ASN 809 DELETION SEQRES 1 A 87 GLY PRO LEU GLY SER ILE LEU PHE ARG ILE SER TYR ASN SEQRES 2 A 87 SER GLU ILE PHE THR LEU LEU VAL GLU LYS VAL TRP ASN SEQRES 3 A 87 PHE ASP ASP LEU ILE MET ALA ILE ASN SER LYS ILE SER SEQRES 4 A 87 ASN THR HIS ILE SER PRO ILE THR LYS ILE LYS TYR GLN SEQRES 5 A 87 ASP GLU ASP GLY ASP PHE VAL VAL LEU GLY SER ASP GLU SEQRES 6 A 87 ASP TRP ASN VAL ALA LYS GLU MET LEU ALA GLU ASN ASN SEQRES 7 A 87 GLU LYS PHE LEU ASN ILE ARG LEU TYR HELIX 1 1 ASN A 25 ILE A 37 1 13 HELIX 2 2 SER A 38 THR A 40 5 3 HELIX 3 3 SER A 62 ASN A 77 1 16 SHEET 1 A 5 ILE A 15 GLU A 21 0 SHEET 2 A 5 SER A 4 SER A 10 -1 N PHE A 7 O LEU A 18 SHEET 3 A 5 PHE A 80 ARG A 84 1 O ILE A 83 N SER A 10 SHEET 4 A 5 ILE A 48 GLN A 51 -1 N GLN A 51 O ASN A 82 SHEET 5 A 5 PHE A 57 LEU A 60 -1 O VAL A 58 N TYR A 50 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 205 0 0 3 5 0 0 6 0 0 0 7 END