HEADER HYDROLASE 30-JAN-09 2KEM TITLE EXTENDED STRUCTURE OF CITIDINE DEAMINASE DOMAIN OF APOBEC3G COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA DC->DU-EDITING ENZYME APOBEC-3G; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 191-284; COMPND 5 SYNONYM: APOBEC-RELATED CYTIDINE DEAMINASE, ARCD, APOBEC- COMPND 6 RELATED PROTEIN, ARP-9, CEM-15, CEM15; COMPND 7 EC: 3.5.4.-; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: APOBEC3G; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-DE3(RIL); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PGEX6P1 KEYWDS HELIX, SHEET, ZINC, NMR, ALTERNATIVE SPLICING, ANTIVIRAL KEYWDS 2 DEFENSE, CYTOPLASM, HOST-VIRUS INTERACTION, HYDROLASE, KEYWDS 3 METAL-BINDING, NUCLEUS, POLYMORPHISM, UBL CONJUGATION EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR E.HARJES,P.J.GROSS,K.CHEN,Y.LU,K.SHINDO,R.NOWARSKI, AUTHOR 2 J.D.GROSS,M.KOTLER,R.S.HARRIS,H.MATSUO REVDAT 2 07-JUL-09 2KEM 1 JRNL REVDAT 1 02-JUN-09 2KEM 0 JRNL AUTH E.HARJES,P.J.GROSS,K.M.CHEN,Y.LU,K.SHINDO, JRNL AUTH 2 R.NOWARSKI,J.D.GROSS,M.KOTLER,R.S.HARRIS,H.MATSUO JRNL TITL AN EXTENDED STRUCTURE OF THE APOBEC3G CATALYTIC JRNL TITL 2 DOMAIN SUGGESTS A UNIQUE HOLOENZYME MODEL JRNL REF J.MOL.BIOL. V. 389 819 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19389408 JRNL DOI 10.1016/J.JMB.2009.04.031 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER A. T. ET.AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CNS REMARK 4 REMARK 4 2KEM COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-FEB-09. REMARK 100 THE RCSB ID CODE IS RCSB101025. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.3 MM [U-100% 15N] APOBEC3G- REMARK 210 1, 90% H2O/10% D2O; 0.3 MM [U- REMARK 210 13C; U-15N; U-2H] APOBEC3G-2, REMARK 210 90% H2O/10% D2O; 0.3 MM [U- REMARK 210 15N; U-50% 2H] APOBEC3G-3, 90% REMARK 210 H2O/10% D2O; 0.3 MM [U-100% REMARK 210 13C] APOBEC3G-4, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCA; 3D REMARK 210 HNCACB; 3D 1H-15N NOESY; 3D 1H REMARK 210 -13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ; 800 MHZ; 900 MHZ; REMARK 210 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 GLY A -7 REMARK 465 PRO A -6 REMARK 465 LEU A -5 REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 PHE A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ILE A 2 -113.02 -132.68 REMARK 500 1 SER A 6 135.00 164.41 REMARK 500 1 MET A 7 -147.04 -79.64 REMARK 500 1 THR A 11 -65.31 -97.22 REMARK 500 1 TRP A 21 142.06 63.01 REMARK 500 1 ARG A 25 96.07 -44.58 REMARK 500 1 HIS A 26 149.83 -177.49 REMARK 500 1 HIS A 38 68.00 -108.91 REMARK 500 1 ASP A 40 -23.66 129.37 REMARK 500 1 TRP A 42 86.71 -155.28 REMARK 500 1 LEU A 45 -166.63 -61.38 REMARK 500 1 ARG A 48 117.25 177.51 REMARK 500 1 ALA A 53 83.14 -155.71 REMARK 500 1 HIS A 58 -165.38 -177.83 REMARK 500 1 LYS A 59 44.10 -144.53 REMARK 500 1 HIS A 60 -175.20 -177.97 REMARK 500 1 LEU A 63 94.54 -54.52 REMARK 500 1 ALA A 68 -35.99 -38.16 REMARK 500 1 ASP A 82 -63.85 79.64 REMARK 500 1 PRO A 97 -72.29 -94.98 REMARK 500 1 CYS A 98 149.86 153.62 REMARK 500 1 ASN A 112 -66.79 -101.58 REMARK 500 1 LYS A 113 115.73 66.34 REMARK 500 1 HIS A 114 28.26 -177.02 REMARK 500 1 TYR A 125 106.53 -49.61 REMARK 500 1 GLN A 128 37.29 -149.35 REMARK 500 1 ALA A 131 -48.18 80.47 REMARK 500 1 ALA A 141 -27.64 -172.25 REMARK 500 1 ALA A 143 113.46 176.55 REMARK 500 1 LYS A 144 94.37 -67.31 REMARK 500 1 THR A 149 -169.57 -108.09 REMARK 500 1 HIS A 163 -40.33 158.65 REMARK 500 1 GLN A 164 27.54 49.63 REMARK 500 1 PRO A 167 -70.94 -58.88 REMARK 500 1 TRP A 171 -66.76 69.57 REMARK 500 1 ASP A 172 -62.08 81.88 REMARK 500 2 ILE A 2 -160.72 -100.64 REMARK 500 2 SER A 6 124.62 165.40 REMARK 500 2 MET A 7 -150.02 -79.41 REMARK 500 2 THR A 11 -65.22 -95.54 REMARK 500 2 ARG A 23 -75.58 -47.20 REMARK 500 2 ARG A 25 79.63 42.98 REMARK 500 2 GLU A 27 48.12 -81.51 REMARK 500 2 THR A 28 108.13 9.33 REMARK 500 2 HIS A 38 67.21 -113.48 REMARK 500 2 ASP A 40 -23.02 129.24 REMARK 500 2 TRP A 42 87.03 -155.19 REMARK 500 2 ARG A 48 -84.84 -81.66 REMARK 500 2 ARG A 49 46.82 78.84 REMARK 500 2 ALA A 53 91.62 -162.18 REMARK 500 2 PRO A 57 -167.39 -65.98 REMARK 500 2 HIS A 58 -75.28 -72.38 REMARK 500 2 LYS A 59 -51.59 -122.45 REMARK 500 2 HIS A 60 169.45 62.00 REMARK 500 2 LEU A 63 90.59 58.90 REMARK 500 2 ASP A 82 -63.72 78.85 REMARK 500 2 SER A 96 -177.97 -63.33 REMARK 500 2 PRO A 97 -71.94 -94.05 REMARK 500 2 CYS A 98 150.84 151.42 REMARK 500 2 ASN A 112 -67.42 -98.04 REMARK 500 2 LYS A 113 118.08 67.18 REMARK 500 2 HIS A 114 29.14 -178.23 REMARK 500 2 ARG A 123 138.25 -173.26 REMARK 500 2 TYR A 125 106.76 -58.53 REMARK 500 2 ASP A 127 -46.97 -177.69 REMARK 500 2 GLN A 128 -46.03 -154.36 REMARK 500 2 ARG A 130 60.92 -160.35 REMARK 500 2 ALA A 141 -27.21 -171.56 REMARK 500 2 ALA A 143 113.51 176.27 REMARK 500 2 LYS A 144 94.18 -67.33 REMARK 500 2 HIS A 163 -40.74 159.32 REMARK 500 2 GLN A 164 27.00 48.63 REMARK 500 2 PRO A 167 -70.22 -56.90 REMARK 500 2 TRP A 171 -67.11 69.20 REMARK 500 2 ASP A 172 -65.67 84.64 REMARK 500 2 GLN A 192 91.70 -69.05 REMARK 500 3 ILE A 2 -111.64 -132.16 REMARK 500 3 SER A 6 135.28 161.01 REMARK 500 3 MET A 7 -157.53 -79.44 REMARK 500 3 THR A 11 -62.71 -97.59 REMARK 500 3 ASN A 17 94.57 -61.05 REMARK 500 3 ASN A 18 77.32 52.98 REMARK 500 3 GLU A 19 96.54 -33.48 REMARK 500 3 PRO A 20 -164.80 -72.52 REMARK 500 3 TRP A 21 165.74 65.91 REMARK 500 3 VAL A 22 161.78 -38.30 REMARK 500 3 ARG A 25 -0.50 160.32 REMARK 500 3 THR A 28 134.34 -26.91 REMARK 500 3 HIS A 38 67.81 -111.67 REMARK 500 3 ASP A 40 -23.67 129.45 REMARK 500 3 TRP A 42 86.88 -155.28 REMARK 500 3 LYS A 44 -83.34 -66.45 REMARK 500 3 LEU A 45 -166.66 56.25 REMARK 500 3 ASN A 46 48.05 -91.55 REMARK 500 3 ALA A 53 88.66 -159.81 REMARK 500 3 PRO A 57 -161.71 -58.99 REMARK 500 3 LYS A 59 -167.51 -112.66 REMARK 500 3 HIS A 60 -46.27 -148.04 REMARK 500 3 ASP A 82 -63.89 79.99 REMARK 500 3 SER A 96 167.64 -46.02 REMARK 500 3 PRO A 97 -72.13 -72.50 REMARK 500 3 CYS A 98 162.45 141.74 REMARK 500 3 ASN A 112 -62.16 -103.42 REMARK 500 3 LYS A 113 111.19 61.82 REMARK 500 3 HIS A 114 27.62 -170.62 REMARK 500 3 ASP A 127 -68.25 -162.76 REMARK 500 3 GLN A 128 66.94 -158.47 REMARK 500 3 ARG A 130 -162.24 -121.42 REMARK 500 3 ALA A 131 -48.87 84.16 REMARK 500 3 ALA A 141 -28.13 -172.03 REMARK 500 3 ALA A 143 113.49 175.01 REMARK 500 3 LYS A 144 95.47 -67.09 REMARK 500 3 TRP A 157 -70.32 -42.48 REMARK 500 3 HIS A 163 -38.75 166.21 REMARK 500 3 GLN A 164 27.10 49.74 REMARK 500 3 PRO A 167 -70.67 -88.43 REMARK 500 3 PRO A 170 -72.53 -86.39 REMARK 500 3 TRP A 171 -71.48 65.83 REMARK 500 3 ASP A 172 -56.06 95.83 REMARK 500 3 ASN A 191 28.17 49.90 REMARK 500 4 SER A 6 134.31 159.75 REMARK 500 4 MET A 7 -159.07 -79.49 REMARK 500 4 THR A 11 -64.96 -94.46 REMARK 500 4 TRP A 21 -167.21 -177.46 REMARK 500 4 HIS A 26 136.39 -177.60 REMARK 500 4 THR A 28 157.51 -46.61 REMARK 500 4 HIS A 38 66.08 -112.55 REMARK 500 4 ASP A 40 -23.73 129.22 REMARK 500 4 TRP A 42 86.90 -155.14 REMARK 500 4 LEU A 45 -88.64 56.15 REMARK 500 4 ASN A 46 85.63 179.28 REMARK 500 4 GLN A 47 168.13 57.20 REMARK 500 4 ARG A 48 -77.61 -111.88 REMARK 500 4 ARG A 49 -19.81 -177.09 REMARK 500 4 ALA A 53 88.08 -159.59 REMARK 500 4 PRO A 57 -168.93 -64.77 REMARK 500 4 ASP A 82 -45.85 88.21 REMARK 500 4 TRP A 95 -169.83 -166.62 REMARK 500 4 PRO A 97 -71.99 -93.94 REMARK 500 4 CYS A 98 147.69 158.07 REMARK 500 4 ASN A 112 -64.32 -104.58 REMARK 500 4 LYS A 113 110.95 62.29 REMARK 500 4 HIS A 114 25.89 -166.95 REMARK 500 4 ASP A 127 -77.12 -170.71 REMARK 500 4 GLN A 128 -59.25 -139.92 REMARK 500 4 ALA A 131 -59.04 71.93 REMARK 500 4 ALA A 141 -28.52 -173.09 REMARK 500 4 ALA A 143 112.91 176.77 REMARK 500 4 LYS A 144 94.16 -66.90 REMARK 500 4 THR A 149 -169.74 -107.26 REMARK 500 4 HIS A 163 -46.47 166.56 REMARK 500 4 GLN A 164 26.39 45.11 REMARK 500 4 PRO A 167 -70.63 -88.29 REMARK 500 4 PRO A 170 -70.60 -91.01 REMARK 500 4 TRP A 171 -70.62 81.46 REMARK 500 4 ASP A 172 -66.44 88.28 REMARK 500 5 ILE A 2 -116.93 -130.78 REMARK 500 5 SER A 6 133.98 159.97 REMARK 500 5 MET A 7 -156.82 -79.30 REMARK 500 5 THR A 11 -66.54 -97.83 REMARK 500 5 PHE A 14 -60.58 -91.01 REMARK 500 5 ASN A 18 80.16 46.88 REMARK 500 5 GLU A 19 106.24 -53.63 REMARK 500 5 TRP A 21 133.71 66.18 REMARK 500 5 VAL A 22 178.97 -50.65 REMARK 500 5 ARG A 25 127.63 78.56 REMARK 500 5 THR A 28 128.48 -21.11 REMARK 500 5 HIS A 38 63.75 -118.96 REMARK 500 5 ASP A 40 -20.73 129.23 REMARK 500 5 TRP A 42 86.59 -154.99 REMARK 500 5 LEU A 45 -89.12 43.05 REMARK 500 5 ARG A 48 109.06 36.16 REMARK 500 5 ALA A 53 86.31 -161.91 REMARK 500 5 ALA A 56 -179.01 -49.82 REMARK 500 5 LYS A 59 -163.32 -119.99 REMARK 500 5 HIS A 60 45.32 -105.94 REMARK 500 5 LEU A 63 67.68 67.68 REMARK 500 5 ASP A 82 -63.53 78.56 REMARK 500 5 SER A 96 177.52 -53.06 REMARK 500 5 PRO A 97 -71.62 -92.58 REMARK 500 5 CYS A 98 151.27 148.77 REMARK 500 5 ASN A 112 -60.89 -94.83 REMARK 500 5 LYS A 113 115.19 59.23 REMARK 500 5 HIS A 114 28.56 -174.03 REMARK 500 5 GLN A 128 -48.04 -145.89 REMARK 500 5 ARG A 130 119.46 -166.70 REMARK 500 5 ALA A 141 -29.09 -177.15 REMARK 500 5 ALA A 143 114.26 174.15 REMARK 500 5 LYS A 144 95.36 -66.86 REMARK 500 5 HIS A 163 -41.85 162.67 REMARK 500 5 PRO A 167 -70.70 -62.27 REMARK 500 5 TRP A 171 -66.56 69.44 REMARK 500 5 ASP A 172 -69.28 93.43 REMARK 500 5 GLN A 190 -64.27 -126.14 REMARK 500 5 GLU A 193 149.39 -171.34 REMARK 500 6 ILE A 2 -77.78 -136.59 REMARK 500 6 SER A 6 128.54 159.83 REMARK 500 6 MET A 7 -152.74 -79.93 REMARK 500 6 THR A 11 -65.80 -95.21 REMARK 500 6 ASN A 18 -30.38 89.56 REMARK 500 6 TRP A 21 -36.74 178.72 REMARK 500 6 ARG A 25 130.05 -27.37 REMARK 500 6 HIS A 26 112.61 -161.46 REMARK 500 6 THR A 28 155.72 -49.37 REMARK 500 6 HIS A 38 66.98 -110.69 REMARK 500 6 ASP A 40 -23.52 129.41 REMARK 500 6 TRP A 42 86.96 -155.23 REMARK 500 6 LEU A 45 127.86 -179.21 REMARK 500 6 ASN A 46 92.47 -58.01 REMARK 500 6 ARG A 48 -82.76 -132.42 REMARK 500 6 ARG A 49 48.45 80.41 REMARK 500 6 ALA A 53 87.70 -159.36 REMARK 500 6 PRO A 57 -175.91 -64.11 REMARK 500 6 HIS A 58 -179.78 -57.81 REMARK 500 6 ASP A 82 -62.88 76.36 REMARK 500 6 SER A 96 176.11 -51.42 REMARK 500 6 PRO A 97 -71.92 -94.31 REMARK 500 6 CYS A 98 149.03 150.10 REMARK 500 6 ASN A 112 -63.25 -101.73 REMARK 500 6 LYS A 113 117.03 63.81 REMARK 500 6 HIS A 114 28.75 -177.07 REMARK 500 6 TYR A 125 108.86 -53.13 REMARK 500 6 GLN A 128 -38.14 -177.82 REMARK 500 6 ARG A 130 -62.98 -138.66 REMARK 500 6 ALA A 141 -26.12 -172.04 REMARK 500 6 ALA A 143 115.26 173.63 REMARK 500 6 LYS A 144 94.66 -67.04 REMARK 500 6 TRP A 157 -70.35 -43.80 REMARK 500 6 HIS A 163 -46.83 168.19 REMARK 500 6 GLN A 164 28.17 44.09 REMARK 500 6 PRO A 167 -70.11 -57.54 REMARK 500 6 PRO A 170 -70.85 -93.19 REMARK 500 6 TRP A 171 -115.88 80.26 REMARK 500 6 ASP A 172 -54.36 153.06 REMARK 500 6 GLN A 192 90.50 -68.56 REMARK 500 7 ILE A 2 -113.45 -131.08 REMARK 500 7 SER A 6 132.14 164.05 REMARK 500 7 MET A 7 -150.63 -79.84 REMARK 500 7 THR A 11 -64.00 -97.24 REMARK 500 7 ASN A 17 153.58 -49.83 REMARK 500 7 GLU A 19 100.62 -37.85 REMARK 500 7 PRO A 20 165.46 -42.30 REMARK 500 7 TRP A 21 -15.74 165.31 REMARK 500 7 ARG A 25 -84.14 30.13 REMARK 500 7 HIS A 26 112.17 -173.89 REMARK 500 7 THR A 28 126.74 -13.03 REMARK 500 7 HIS A 38 63.38 -112.43 REMARK 500 7 ASP A 40 -22.56 129.27 REMARK 500 7 TRP A 42 87.12 -155.04 REMARK 500 7 LYS A 44 -159.26 -90.29 REMARK 500 7 LEU A 45 -86.04 64.76 REMARK 500 7 ASN A 46 82.95 -64.01 REMARK 500 7 GLN A 47 -156.27 -179.21 REMARK 500 7 ARG A 48 104.65 48.68 REMARK 500 7 ALA A 53 89.24 -159.92 REMARK 500 7 HIS A 58 171.31 55.91 REMARK 500 7 ALA A 68 -35.10 -39.53 REMARK 500 7 ASP A 82 -63.65 77.90 REMARK 500 7 SER A 96 178.61 -53.02 REMARK 500 7 PRO A 97 -71.60 -87.67 REMARK 500 7 CYS A 98 158.24 153.74 REMARK 500 7 LYS A 113 110.36 57.50 REMARK 500 7 HIS A 114 26.92 -167.23 REMARK 500 7 ARG A 130 -165.68 176.63 REMARK 500 7 ALA A 131 -39.81 -173.98 REMARK 500 7 ALA A 141 -27.70 -174.58 REMARK 500 7 ALA A 143 111.98 177.50 REMARK 500 7 LYS A 144 93.21 -67.08 REMARK 500 7 HIS A 163 -41.32 163.30 REMARK 500 7 GLN A 164 25.28 48.81 REMARK 500 7 PRO A 167 -70.76 -61.43 REMARK 500 7 TRP A 171 -63.65 69.24 REMARK 500 7 ASP A 172 -53.92 87.14 REMARK 500 8 ILE A 2 -75.03 -118.84 REMARK 500 8 LEU A 3 -49.52 -143.49 REMARK 500 8 SER A 6 127.22 159.98 REMARK 500 8 MET A 7 -153.46 -79.39 REMARK 500 8 THR A 11 -66.32 -93.93 REMARK 500 8 ASN A 18 -44.28 77.85 REMARK 500 8 PRO A 20 -80.40 -50.89 REMARK 500 8 TRP A 21 161.67 173.06 REMARK 500 8 VAL A 22 -173.95 44.34 REMARK 500 8 ARG A 25 97.56 43.49 REMARK 500 8 HIS A 38 -149.77 -105.87 REMARK 500 8 ASN A 39 60.91 -69.69 REMARK 500 8 ASP A 40 12.20 101.47 REMARK 500 8 TRP A 42 86.48 -155.32 REMARK 500 8 LEU A 45 -164.06 -61.19 REMARK 500 8 ARG A 48 129.49 175.22 REMARK 500 8 ALA A 53 87.19 -159.25 REMARK 500 8 HIS A 58 -76.44 -178.06 REMARK 500 8 ASP A 82 -63.75 80.17 REMARK 500 8 SER A 96 179.94 -54.30 REMARK 500 8 PRO A 97 -71.73 -94.00 REMARK 500 8 CYS A 98 154.00 156.14 REMARK 500 8 ASN A 112 -60.66 -103.88 REMARK 500 8 LYS A 113 115.50 60.12 REMARK 500 8 HIS A 114 27.66 -173.41 REMARK 500 8 ASP A 127 -164.87 -61.39 REMARK 500 8 ARG A 130 135.14 63.32 REMARK 500 8 ALA A 141 -26.35 -174.52 REMARK 500 8 ALA A 143 113.71 175.00 REMARK 500 8 LYS A 144 94.46 -66.97 REMARK 500 8 THR A 149 -169.42 -101.20 REMARK 500 8 PRO A 167 -70.43 -64.85 REMARK 500 8 PRO A 170 -72.35 -88.09 REMARK 500 8 TRP A 171 -108.35 78.15 REMARK 500 8 ASP A 172 -54.18 135.48 REMARK 500 8 ASN A 191 28.16 49.95 REMARK 500 8 GLN A 192 96.94 -69.26 REMARK 500 9 ILE A 2 -79.41 -137.37 REMARK 500 9 SER A 6 132.92 159.67 REMARK 500 9 MET A 7 -159.49 -79.07 REMARK 500 9 THR A 11 -64.90 -97.39 REMARK 500 9 ASN A 18 83.82 57.36 REMARK 500 9 TRP A 21 129.66 -177.03 REMARK 500 9 ARG A 23 -72.80 -55.07 REMARK 500 9 ARG A 25 112.85 60.65 REMARK 500 9 THR A 28 123.40 -14.16 REMARK 500 9 HIS A 38 65.20 -115.21 REMARK 500 9 ASP A 40 -24.24 129.42 REMARK 500 9 TRP A 42 87.03 -155.44 REMARK 500 9 LYS A 44 -83.44 -78.23 REMARK 500 9 LEU A 45 63.20 65.74 REMARK 500 9 ASN A 46 -176.76 57.18 REMARK 500 9 GLN A 47 -174.76 -55.93 REMARK 500 9 ARG A 48 -87.88 -112.59 REMARK 500 9 ARG A 49 -9.55 -155.74 REMARK 500 9 ALA A 53 89.02 -161.19 REMARK 500 9 ALA A 56 73.29 -106.94 REMARK 500 9 HIS A 60 150.09 62.18 REMARK 500 9 ASP A 82 -62.97 74.81 REMARK 500 9 SER A 96 174.23 -49.15 REMARK 500 9 PRO A 97 -72.00 -94.47 REMARK 500 9 CYS A 98 149.19 148.88 REMARK 500 9 ASN A 112 -66.33 -102.73 REMARK 500 9 LYS A 113 117.34 66.33 REMARK 500 9 HIS A 114 28.85 -178.02 REMARK 500 9 ASP A 127 -80.74 179.26 REMARK 500 9 ARG A 130 -6.68 79.30 REMARK 500 9 ALA A 141 -28.86 -171.11 REMARK 500 9 ALA A 143 114.76 175.82 REMARK 500 9 LYS A 144 94.45 -67.19 REMARK 500 9 THR A 149 -168.10 -103.73 REMARK 500 9 HIS A 163 49.16 151.38 REMARK 500 9 GLN A 164 42.72 -61.63 REMARK 500 9 PRO A 167 -70.30 -83.29 REMARK 500 9 TRP A 171 -67.33 69.90 REMARK 500 9 ASP A 172 -64.32 85.48 REMARK 500 9 ASN A 191 29.00 48.62 REMARK 500 10 ILE A 2 -110.76 -133.98 REMARK 500 10 SER A 6 133.95 159.64 REMARK 500 10 MET A 7 -156.18 -79.70 REMARK 500 10 THR A 11 -65.07 -95.69 REMARK 500 10 VAL A 22 144.17 67.75 REMARK 500 10 ARG A 25 118.74 -33.46 REMARK 500 10 THR A 28 150.55 -39.70 REMARK 500 10 HIS A 38 65.98 -111.28 REMARK 500 10 ASP A 40 -23.65 129.43 REMARK 500 10 TRP A 42 86.80 -155.34 REMARK 500 10 GLN A 47 52.75 -90.40 REMARK 500 10 ARG A 48 111.74 46.70 REMARK 500 10 ALA A 53 85.51 -158.18 REMARK 500 10 LYS A 59 35.12 -168.82 REMARK 500 10 ASP A 82 -63.43 81.16 REMARK 500 10 SER A 96 -179.88 -54.63 REMARK 500 10 PRO A 97 -72.36 -84.71 REMARK 500 10 CYS A 98 159.71 147.12 REMARK 500 10 LYS A 113 111.96 59.41 REMARK 500 10 HIS A 114 25.51 -167.43 REMARK 500 10 ASP A 127 -71.69 -165.84 REMARK 500 10 ARG A 130 161.66 63.44 REMARK 500 10 ALA A 141 -23.52 -176.27 REMARK 500 10 ALA A 143 112.25 178.03 REMARK 500 10 LYS A 144 95.49 -66.63 REMARK 500 10 TRP A 157 -70.00 -45.42 REMARK 500 10 HIS A 163 -47.77 168.58 REMARK 500 10 GLN A 164 28.18 44.96 REMARK 500 10 PRO A 170 -72.09 -88.64 REMARK 500 10 TRP A 171 -69.58 81.83 REMARK 500 10 ASP A 172 -65.36 86.32 REMARK 500 10 GLN A 190 -64.34 -126.26 REMARK 500 10 ASN A 191 32.62 -74.66 REMARK 500 10 GLU A 193 -44.05 -162.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 195 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 67 ND1 REMARK 620 2 CYS A 98 SG 115.5 REMARK 620 3 CYS A 101 SG 112.8 78.0 REMARK 620 N 1 2 REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 195 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2JYW RELATED DB: PDB REMARK 900 198-384 APOBEC3G NMR REMARK 900 RELATED ID: 3E1U RELATED DB: PDB REMARK 900 197-384 APOBEC3G CRYSTAL REMARK 900 RELATED ID: 2KBO RELATED DB: PDB REMARK 900 193-384 APOBEC3G NMR DBREF 2KEM A 1 194 UNP Q9HC16 ABC3G_HUMAN 191 384 SEQADV 2KEM GLY A -7 UNP Q9HC16 EXPRESSION TAG SEQADV 2KEM PRO A -6 UNP Q9HC16 EXPRESSION TAG SEQADV 2KEM LEU A -5 UNP Q9HC16 EXPRESSION TAG SEQADV 2KEM GLY A -4 UNP Q9HC16 EXPRESSION TAG SEQADV 2KEM SER A -3 UNP Q9HC16 EXPRESSION TAG SEQADV 2KEM PRO A -2 UNP Q9HC16 EXPRESSION TAG SEQADV 2KEM GLY A -1 UNP Q9HC16 EXPRESSION TAG SEQADV 2KEM PHE A 0 UNP Q9HC16 EXPRESSION TAG SEQADV 2KEM LYS A 44 UNP Q9HC16 LEU 234 ENGINEERED SEQADV 2KEM ALA A 53 UNP Q9HC16 CYS 243 ENGINEERED SEQADV 2KEM LYS A 120 UNP Q9HC16 PHE 310 ENGINEERED SEQADV 2KEM ALA A 131 UNP Q9HC16 CYS 321 ENGINEERED SEQADV 2KEM ALA A 166 UNP Q9HC16 CYS 356 ENGINEERED SEQRES 1 A 202 GLY PRO LEU GLY SER PRO GLY PHE GLU ILE LEU ARG HIS SEQRES 2 A 202 SER MET ASP PRO PRO THR PHE THR PHE ASN PHE ASN ASN SEQRES 3 A 202 GLU PRO TRP VAL ARG GLY ARG HIS GLU THR TYR LEU CYS SEQRES 4 A 202 TYR GLU VAL GLU ARG MET HIS ASN ASP THR TRP VAL LYS SEQRES 5 A 202 LEU ASN GLN ARG ARG GLY PHE LEU ALA ASN GLN ALA PRO SEQRES 6 A 202 HIS LYS HIS GLY PHE LEU GLU GLY ARG HIS ALA GLU LEU SEQRES 7 A 202 CYS PHE LEU ASP VAL ILE PRO PHE TRP LYS LEU ASP LEU SEQRES 8 A 202 ASP GLN ASP TYR ARG VAL THR CYS PHE THR SER TRP SER SEQRES 9 A 202 PRO CYS PHE SER CYS ALA GLN GLU MET ALA LYS PHE ILE SEQRES 10 A 202 SER LYS ASN LYS HIS VAL SER LEU CYS ILE LYS THR ALA SEQRES 11 A 202 ARG ILE TYR ASP ASP GLN GLY ARG ALA GLN GLU GLY LEU SEQRES 12 A 202 ARG THR LEU ALA GLU ALA GLY ALA LYS ILE SER ILE MET SEQRES 13 A 202 THR TYR SER GLU PHE LYS HIS CYS TRP ASP THR PHE VAL SEQRES 14 A 202 ASP HIS GLN GLY ALA PRO PHE GLN PRO TRP ASP GLY LEU SEQRES 15 A 202 ASP GLU HIS SER GLN ASP LEU SER GLY ARG LEU ARG ALA SEQRES 16 A 202 ILE LEU GLN ASN GLN GLU ASN HET ZN A 195 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ HELIX 1 1 THR A 11 PHE A 16 1 6 HELIX 2 2 HIS A 67 TRP A 79 1 13 HELIX 3 3 CYS A 98 SER A 110 1 13 HELIX 4 4 ARG A 130 ALA A 141 1 12 HELIX 5 5 THR A 149 PHE A 160 1 12 HELIX 6 7 ASP A 172 LEU A 189 1 18 SHEET 1 A 5 THR A 41 VAL A 43 0 SHEET 2 A 5 LEU A 30 HIS A 38 -1 N HIS A 38 O THR A 41 SHEET 3 A 5 ASP A 86 PHE A 92 -1 O THR A 90 N GLU A 33 SHEET 4 A 5 VAL A 115 THR A 121 1 SHEET 5 A 5 LYS A 144 ILE A 147 1 O LYS A 144 N LEU A 117 SHEET 1 B 5 GLY A 50 LEU A 52 0 SHEET 2 B 5 LEU A 30 HIS A 38 -1 N HIS A 38 O THR A 41 SHEET 3 B 5 ASP A 86 PHE A 92 -1 O THR A 90 N GLU A 33 SHEET 4 B 5 VAL A 115 THR A 121 1 SHEET 5 B 5 LYS A 144 ILE A 147 1 O LYS A 144 N LEU A 117 LINK ND1 HIS A 67 ZN ZN A 195 1555 1555 2.26 LINK SG CYS A 98 ZN ZN A 195 1555 1555 2.30 LINK SG CYS A 101 ZN ZN A 195 1555 1555 2.31 SITE 1 AC1 5 HIS A 67 GLU A 69 PRO A 97 CYS A 98 SITE 2 AC1 5 CYS A 101 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 502 0 1 6 10 0 2 6 0 0 0 16 END