HEADER TRANSCRIPTION 12-DEC-08 2KBY TITLE THE TETRAMERIZATION DOMAIN OF HUMAN P73 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TUMOR PROTEIN P73; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: TETRAMERIZATION DOMAIN, UNP RESIDUES 351-398; COMPND 5 SYNONYM: P53-LIKE TRANSCRIPTION FACTOR, P53-RELATED COMPND 6 PROTEIN; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: P73, TP73; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PBH4 KEYWDS TETRAMERIZATION DOMAIN, ACTIVATOR, ALTERNATIVE SPLICING, KEYWDS 2 ANTI-ONCOGENE, APOPTOSIS, CELL CYCLE, DNA-BINDING, METAL- KEYWDS 3 BINDING, NUCLEUS, PHOSPHOPROTEIN, TRANSCRIPTION, KEYWDS 4 TRANSCRIPTION REGULATION, UBL CONJUGATION, ZINC EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR D.COUTANDIN,T.IKEYA,F.LOEHR,P.GUNTERT,H.D.OU,V.DOETSCH REVDAT 2 01-DEC-09 2KBY 1 JRNL SEQADV REVDAT 1 29-SEP-09 2KBY 0 JRNL AUTH D.COUTANDIN,F.LOHR,F.H.NIESEN,T.IKEYA,T.A.WEBER, JRNL AUTH 2 B.SCHAFER,E.M.ZIELONKA,A.N.BULLOCK,A.YANG, JRNL AUTH 3 P.GUNTERT,S.KNAPP,F.MCKEON,H.D.OU,V.DOTSCH JRNL TITL CONFORMATIONAL STABILITY AND ACTIVITY OF P73 JRNL TITL 2 REQUIRE A SECOND HELIX IN THE TETRAMERIZATION JRNL TITL 3 DOMAIN. JRNL REF CELL DEATH DIFFER. V. 16 1582 2009 JRNL REFN ISSN 1350-9047 JRNL PMID 19763140 JRNL DOI 10.1038/CDD.2009.139 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 2.2 REMARK 3 AUTHORS : LINGE, O'DONOGHUE, NILGES REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KBY COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-DEC-08. REMARK 100 THE RCSB ID CODE IS RCSB100930. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303; 303; 303 REMARK 210 PH : 7.0; NULL; 6.8 REMARK 210 IONIC STRENGTH : NULL; NULL; NULL REMARK 210 PRESSURE : 1 ATM; 1 ATM; 1 ATM REMARK 210 SAMPLE CONTENTS : 2.5MM [U-13C; U-15N] P73 TD- REMARK 210 1, 20MM SODIUM PHOSPHATE-2, REMARK 210 100MM SODIUM CHLORIDE-3, 100% REMARK 210 D2O; 2.5MM [U-13C; U-15N] P73 REMARK 210 TD-4, 20MM SODIUM PHOSPHATE-5, REMARK 210 100MM SODIUM CHLORIDE-6, 95% REMARK 210 H2O/5% D2O; 2.5MM [U-15N] P73 REMARK 210 TD-7, 20MM SODIUM PHOSPHATE-8, REMARK 210 100MM SODIUM CHLORIDE-9, 95% REMARK 210 H2O/5% D2O; 2.5MM [U-15N] P73 REMARK 210 TD-10, 2.5MM [U-13C] P73 TD- REMARK 210 11, 20MM SODIUM PHOSPHATE-12, REMARK 210 100MM SODIUM CHLORIDE-13, 95% REMARK 210 H2O/5% D2O; 2.5MM [U-15N] P73 REMARK 210 TD-14, 2.5MM [U-13C] P73 TD- REMARK 210 15, 20MM SODIUM PHOSPHATE-16, REMARK 210 100MM SODIUM CHLORIDE-17, 100% REMARK 210 D2O; 2.5MM [U-10% 13C] P73 TD- REMARK 210 18, 20MM SODIUM PHOSPHATE-19, REMARK 210 100MM SODIUM CHLORIDE-20, 95% REMARK 210 H2O/5% D2O; 2.5MM [U-13C; U- REMARK 210 15N] P73 TD-21, 16.4 HZ PF1 REMARK 210 PHAGE-22, 50MM ARGININE-23, REMARK 210 50MM GLUTAMATE-24, 95% H2O/5% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H NOESY; 3D NOESY- REMARK 210 [15N,1H]-TROSY; 3D NOESY-[13C, REMARK 210 1H]-HSQC; 4D-CT-J-RESOLVED 13C REMARK 210 -SEPARATED NOESY; 3D 15N- REMARK 210 EDITED/13C-SEPARATED NOESY; 3D REMARK 210 15N/13C-SEPARATED NOESY; 3D REMARK 210 HNCACB; 3D HN(CO)CA; 3D HNCO; REMARK 210 3D H(CCO)NH; 3D C(CO)NH; TOCSY REMARK 210 -[15N,1H]-TROSY; CT-[13C,1H]- REMARK 210 HSQC; C-COUPLED HA(CACO)NH; REMARK 210 F2-IPAP-CT-[13C,1H]-HSQC; REMARK 210 [15N,1H]-TROSY/ANTI-TROSY; HN- REMARK 210 TROSY IPAP; C-COUPLED HNCO REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ARIA 2.2 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING A COMBINATION OF NOE REMARK 210 AND RESIDUAL DIPOLAR COUPLING DATA. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 GLY D -1 REMARK 465 SER D 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR A 39 HE21 GLN A 43 1.40 REMARK 500 HH TYR B 39 HE21 GLN B 43 1.40 REMARK 500 HH TYR D 39 HE21 GLN D 43 1.40 REMARK 500 HH TYR C 39 HE21 GLN C 43 1.40 REMARK 500 HE21 GLN B 43 HZ1 LYS D 22 1.40 REMARK 500 HZ1 LYS A 22 HE21 GLN C 43 1.40 REMARK 500 HE21 GLN A 43 HZ1 LYS C 22 1.40 REMARK 500 HZ1 LYS B 22 HE21 GLN D 43 1.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 2 9.00 -168.77 REMARK 500 1 ASP A 3 -143.44 -77.88 REMARK 500 1 GLU B 2 8.90 -168.74 REMARK 500 1 ASP B 3 -143.38 -77.87 REMARK 500 1 GLU C 2 8.96 -168.81 REMARK 500 1 ASP C 3 -143.52 -77.83 REMARK 500 1 GLU D 2 8.79 -168.77 REMARK 500 1 ASP D 3 -143.54 -77.74 REMARK 500 2 GLU A 2 -150.41 -169.71 REMARK 500 2 ASP A 3 -157.23 70.45 REMARK 500 2 GLN A 47 37.88 -85.07 REMARK 500 2 GLU B 2 -150.49 -169.74 REMARK 500 2 ASP B 3 -157.16 70.56 REMARK 500 2 GLN B 47 38.01 -85.09 REMARK 500 2 GLU C 2 -150.51 -169.78 REMARK 500 2 ASP C 3 -157.20 70.48 REMARK 500 2 GLN C 47 37.97 -85.13 REMARK 500 2 GLU D 2 -150.48 -169.80 REMARK 500 2 ASP D 3 -157.24 70.49 REMARK 500 2 GLN D 47 37.95 -85.08 REMARK 500 3 GLU A 2 11.79 -168.34 REMARK 500 3 ASP A 3 -144.34 -79.43 REMARK 500 3 LEU A 46 -71.37 -115.04 REMARK 500 3 GLU B 2 11.68 -168.38 REMARK 500 3 ASP B 3 -144.38 -79.31 REMARK 500 3 LEU B 46 -71.37 -115.06 REMARK 500 3 GLU C 2 11.75 -168.37 REMARK 500 3 ASP C 3 -144.31 -79.39 REMARK 500 3 LEU C 46 -71.34 -115.06 REMARK 500 3 GLU D 2 11.69 -168.31 REMARK 500 3 ASP D 3 -144.28 -79.33 REMARK 500 3 LEU D 46 -71.37 -115.00 REMARK 500 4 GLU A 2 21.53 -163.11 REMARK 500 4 ASP A 3 -145.12 -80.33 REMARK 500 4 LEU A 46 -67.86 -107.08 REMARK 500 4 GLU B 2 21.51 -163.04 REMARK 500 4 ASP B 3 -145.17 -80.24 REMARK 500 4 LEU B 46 -67.83 -107.20 REMARK 500 4 GLU C 2 21.48 -163.09 REMARK 500 4 ASP C 3 -145.17 -80.24 REMARK 500 4 LEU C 46 -67.93 -107.09 REMARK 500 4 GLU D 2 21.48 -163.06 REMARK 500 4 ASP D 3 -145.18 -80.28 REMARK 500 4 LEU D 46 -67.84 -107.14 REMARK 500 5 GLU A 2 2.57 -167.54 REMARK 500 5 ASP A 3 -139.91 -73.16 REMARK 500 5 LEU A 46 -72.39 -109.42 REMARK 500 5 GLU B 2 2.63 -167.53 REMARK 500 5 ASP B 3 -139.94 -73.25 REMARK 500 5 LEU B 46 -72.48 -109.40 REMARK 500 REMARK 500 THIS ENTRY HAS 236 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2KBY A 1 48 UNP O15350 P73_HUMAN 351 398 DBREF 2KBY B 1 48 UNP O15350 P73_HUMAN 351 398 DBREF 2KBY C 1 48 UNP O15350 P73_HUMAN 351 398 DBREF 2KBY D 1 48 UNP O15350 P73_HUMAN 351 398 SEQADV 2KBY GLY A -1 UNP O15350 EXPRESSION TAG SEQADV 2KBY SER A 0 UNP O15350 EXPRESSION TAG SEQADV 2KBY GLY B -1 UNP O15350 EXPRESSION TAG SEQADV 2KBY SER B 0 UNP O15350 EXPRESSION TAG SEQADV 2KBY GLY C -1 UNP O15350 EXPRESSION TAG SEQADV 2KBY SER C 0 UNP O15350 EXPRESSION TAG SEQADV 2KBY GLY D -1 UNP O15350 EXPRESSION TAG SEQADV 2KBY SER D 0 UNP O15350 EXPRESSION TAG SEQRES 1 A 50 GLY SER ASP GLU ASP THR TYR TYR LEU GLN VAL ARG GLY SEQRES 2 A 50 ARG GLU ASN PHE GLU ILE LEU MET LYS LEU LYS GLU SER SEQRES 3 A 50 LEU GLU LEU MET GLU LEU VAL PRO GLN PRO LEU VAL ASP SEQRES 4 A 50 SER TYR ARG GLN GLN GLN GLN LEU LEU GLN ARG SEQRES 1 B 50 GLY SER ASP GLU ASP THR TYR TYR LEU GLN VAL ARG GLY SEQRES 2 B 50 ARG GLU ASN PHE GLU ILE LEU MET LYS LEU LYS GLU SER SEQRES 3 B 50 LEU GLU LEU MET GLU LEU VAL PRO GLN PRO LEU VAL ASP SEQRES 4 B 50 SER TYR ARG GLN GLN GLN GLN LEU LEU GLN ARG SEQRES 1 C 50 GLY SER ASP GLU ASP THR TYR TYR LEU GLN VAL ARG GLY SEQRES 2 C 50 ARG GLU ASN PHE GLU ILE LEU MET LYS LEU LYS GLU SER SEQRES 3 C 50 LEU GLU LEU MET GLU LEU VAL PRO GLN PRO LEU VAL ASP SEQRES 4 C 50 SER TYR ARG GLN GLN GLN GLN LEU LEU GLN ARG SEQRES 1 D 50 GLY SER ASP GLU ASP THR TYR TYR LEU GLN VAL ARG GLY SEQRES 2 D 50 ARG GLU ASN PHE GLU ILE LEU MET LYS LEU LYS GLU SER SEQRES 3 D 50 LEU GLU LEU MET GLU LEU VAL PRO GLN PRO LEU VAL ASP SEQRES 4 D 50 SER TYR ARG GLN GLN GLN GLN LEU LEU GLN ARG HELIX 1 1 GLY A 11 MET A 28 1 18 HELIX 2 2 PRO A 32 LEU A 45 1 14 HELIX 3 3 GLY B 11 MET B 28 1 18 HELIX 4 4 PRO B 32 LEU B 45 1 14 HELIX 5 5 GLY C 11 MET C 28 1 18 HELIX 6 6 PRO C 32 LEU C 45 1 14 HELIX 7 7 GLY D 11 MET D 28 1 18 HELIX 8 8 PRO D 32 LEU D 45 1 14 SHEET 1 A 2 THR A 4 ARG A 10 0 SHEET 2 A 2 THR B 4 ARG B 10 -1 O VAL B 9 N TYR A 5 SHEET 1 B 2 THR C 4 ARG C 10 0 SHEET 2 B 2 THR D 4 ARG D 10 -1 O TYR D 5 N VAL C 9 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 184 0 0 8 4 0 0 6 0 0 0 16 END