HEADER TRANSFERASE 16-OCT-06 2IRY TITLE CRYSTAL STRUCTURE OF THE POLYMERASE DOMAIN FROM MYCOBACTERIUM TITLE 2 TUBERCULOSIS LIGASE D WITH DGTP AND MANGANESE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA LIGASE-LIKE PROTEIN RV0938/MT0965; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: LIGD POLYMERASE DOMAIN (RESIDUES 1-300); COMPND 5 EC: 2.7.7.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: RV0938; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS POLYMERASE, PRIMASE, LIGASE, NHEJ, DGTP, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR N.C.BRISSETT,R.S.PITCHER,A.J.DOHERTY REVDAT 4 13-JUL-11 2IRY 1 VERSN REVDAT 3 24-FEB-09 2IRY 1 VERSN REVDAT 2 30-OCT-07 2IRY 1 JRNL REVDAT 1 02-JAN-07 2IRY 0 JRNL AUTH R.S.PITCHER,N.C.BRISSETT,A.J.PICHER,P.ANDRADE,R.JUAREZ, JRNL AUTH 2 D.THOMPSON,G.C.FOX,L.BLANCO,A.J.DOHERTY JRNL TITL STRUCTURE AND FUNCTION OF A MYCOBACTERIAL NHEJ DNA REPAIR JRNL TITL 2 POLYMERASE. JRNL REF J.MOL.BIOL. V. 366 391 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17174332 JRNL DOI 10.1016/J.JMB.2006.10.046 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 53660 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2868 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.78 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3931 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.2490 REMARK 3 BIN FREE R VALUE SET COUNT : 188 REMARK 3 BIN FREE R VALUE : 0.3280 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4362 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 53 REMARK 3 SOLVENT ATOMS : 659 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 20.26 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.40000 REMARK 3 B22 (A**2) : -0.20000 REMARK 3 B33 (A**2) : -0.22000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.17000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.129 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.128 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.082 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.806 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4526 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6194 ; 1.414 ; 1.979 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 573 ; 5.987 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 183 ;34.396 ;22.678 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 703 ;13.432 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;19.010 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 709 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3420 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2213 ; 0.206 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3065 ; 0.300 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 483 ; 0.146 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 61 ; 0.206 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 52 ; 0.184 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2930 ; 0.794 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4611 ; 1.254 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1830 ; 2.098 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1581 ; 3.191 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 63 REMARK 3 ORIGIN FOR THE GROUP (A): 2.0590 46.3620 24.3950 REMARK 3 T TENSOR REMARK 3 T11: 0.0030 T22: 0.0040 REMARK 3 T33: 0.0102 T12: -0.0028 REMARK 3 T13: -0.0003 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 0.8028 L22: 1.1621 REMARK 3 L33: 0.9369 L12: 0.3077 REMARK 3 L13: 0.3314 L23: 0.0294 REMARK 3 S TENSOR REMARK 3 S11: -0.0332 S12: 0.0163 S13: 0.0097 REMARK 3 S21: -0.1345 S22: -0.0144 S23: -0.0796 REMARK 3 S31: -0.0293 S32: -0.0107 S33: 0.0477 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 64 A 115 REMARK 3 ORIGIN FOR THE GROUP (A): -6.3350 39.9780 18.3730 REMARK 3 T TENSOR REMARK 3 T11: -0.0043 T22: -0.0108 REMARK 3 T33: 0.0039 T12: -0.0156 REMARK 3 T13: -0.0160 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 1.1864 L22: 1.3646 REMARK 3 L33: 2.3512 L12: -0.0610 REMARK 3 L13: 0.3228 L23: 0.6124 REMARK 3 S TENSOR REMARK 3 S11: -0.0035 S12: 0.0484 S13: -0.0874 REMARK 3 S21: -0.0534 S22: -0.0305 S23: 0.0752 REMARK 3 S31: 0.1117 S32: -0.1806 S33: 0.0340 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 116 A 159 REMARK 3 ORIGIN FOR THE GROUP (A): -3.4200 24.9740 30.6520 REMARK 3 T TENSOR REMARK 3 T11: 0.0886 T22: -0.0284 REMARK 3 T33: 0.0709 T12: -0.0277 REMARK 3 T13: -0.0092 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 2.3698 L22: 2.3174 REMARK 3 L33: 4.8356 L12: 0.0424 REMARK 3 L13: 0.0153 L23: -1.9193 REMARK 3 S TENSOR REMARK 3 S11: 0.0808 S12: -0.0225 S13: -0.0270 REMARK 3 S21: -0.2029 S22: -0.0217 S23: 0.0604 REMARK 3 S31: 0.2835 S32: 0.1018 S33: -0.0591 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 160 A 188 REMARK 3 ORIGIN FOR THE GROUP (A): 2.0450 21.7670 35.4570 REMARK 3 T TENSOR REMARK 3 T11: 0.0779 T22: -0.0506 REMARK 3 T33: 0.0451 T12: 0.0163 REMARK 3 T13: -0.0162 T23: 0.0411 REMARK 3 L TENSOR REMARK 3 L11: 2.7832 L22: 6.9690 REMARK 3 L33: 1.6387 L12: -0.0574 REMARK 3 L13: 0.5810 L23: -0.5529 REMARK 3 S TENSOR REMARK 3 S11: 0.0812 S12: -0.0831 S13: -0.3566 REMARK 3 S21: 0.0035 S22: -0.0456 S23: 0.0181 REMARK 3 S31: 0.4451 S32: 0.0958 S33: -0.0356 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 189 A 215 REMARK 3 ORIGIN FOR THE GROUP (A): -8.5400 16.1020 37.9580 REMARK 3 T TENSOR REMARK 3 T11: 0.0943 T22: -0.0580 REMARK 3 T33: -0.0094 T12: -0.1051 REMARK 3 T13: -0.0646 T23: 0.0423 REMARK 3 L TENSOR REMARK 3 L11: 0.6452 L22: 1.1316 REMARK 3 L33: 20.3953 L12: -0.3589 REMARK 3 L13: 0.6881 L23: -2.7858 REMARK 3 S TENSOR REMARK 3 S11: 0.0805 S12: -0.0316 S13: -0.0855 REMARK 3 S21: -0.3641 S22: 0.2496 S23: 0.0720 REMARK 3 S31: 1.1234 S32: -0.4503 S33: -0.3300 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 216 A 223 REMARK 3 ORIGIN FOR THE GROUP (A): -15.6830 25.4940 45.0220 REMARK 3 T TENSOR REMARK 3 T11: 0.2041 T22: 0.2369 REMARK 3 T33: 0.2694 T12: 0.1288 REMARK 3 T13: 0.0101 T23: 0.0910 REMARK 3 L TENSOR REMARK 3 L11: 17.1759 L22: 39.3545 REMARK 3 L33: 59.4614 L12: -4.5345 REMARK 3 L13: 10.8922 L23: 28.6358 REMARK 3 S TENSOR REMARK 3 S11: -0.1606 S12: 0.6149 S13: 1.0687 REMARK 3 S21: -0.5170 S22: -1.6412 S23: 3.0049 REMARK 3 S31: -3.5184 S32: -4.0035 S33: 1.8018 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 224 A 262 REMARK 3 ORIGIN FOR THE GROUP (A): -2.1030 32.0720 36.4300 REMARK 3 T TENSOR REMARK 3 T11: 0.0117 T22: 0.0024 REMARK 3 T33: -0.0159 T12: -0.0271 REMARK 3 T13: -0.0217 T23: 0.0092 REMARK 3 L TENSOR REMARK 3 L11: 0.1482 L22: 1.9397 REMARK 3 L33: 1.3096 L12: 0.1989 REMARK 3 L13: -0.1992 L23: -0.8023 REMARK 3 S TENSOR REMARK 3 S11: 0.0540 S12: -0.1150 S13: 0.0120 REMARK 3 S21: 0.1098 S22: -0.0654 S23: -0.0017 REMARK 3 S31: 0.1749 S32: -0.1168 S33: 0.0113 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 263 A 292 REMARK 3 ORIGIN FOR THE GROUP (A): 10.7780 34.0320 36.4380 REMARK 3 T TENSOR REMARK 3 T11: -0.0345 T22: -0.0093 REMARK 3 T33: 0.0243 T12: 0.0176 REMARK 3 T13: -0.0594 T23: 0.0566 REMARK 3 L TENSOR REMARK 3 L11: 3.3236 L22: 4.0155 REMARK 3 L33: 1.5477 L12: 1.4454 REMARK 3 L13: 0.4524 L23: -0.4899 REMARK 3 S TENSOR REMARK 3 S11: 0.1202 S12: -0.3063 S13: -0.2670 REMARK 3 S21: 0.2542 S22: -0.0926 S23: -0.4968 REMARK 3 S31: 0.0787 S32: 0.2602 S33: -0.0276 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 9 B 63 REMARK 3 ORIGIN FOR THE GROUP (A): -18.3900 -19.5220 21.5240 REMARK 3 T TENSOR REMARK 3 T11: -0.0094 T22: 0.0205 REMARK 3 T33: 0.0019 T12: -0.0214 REMARK 3 T13: -0.0163 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 0.8894 L22: 1.2833 REMARK 3 L33: 0.8893 L12: -0.2925 REMARK 3 L13: 0.0983 L23: -0.1122 REMARK 3 S TENSOR REMARK 3 S11: 0.0445 S12: -0.0472 S13: -0.0759 REMARK 3 S21: 0.0585 S22: -0.0524 S23: 0.0059 REMARK 3 S31: 0.0686 S32: 0.0182 S33: 0.0079 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 64 B 86 REMARK 3 ORIGIN FOR THE GROUP (A): -29.2560 -13.6600 30.7560 REMARK 3 T TENSOR REMARK 3 T11: -0.0139 T22: 0.0218 REMARK 3 T33: 0.0041 T12: -0.0261 REMARK 3 T13: 0.0110 T23: -0.0227 REMARK 3 L TENSOR REMARK 3 L11: 1.6099 L22: 2.1067 REMARK 3 L33: 2.0293 L12: 0.8818 REMARK 3 L13: 0.5088 L23: 1.5267 REMARK 3 S TENSOR REMARK 3 S11: -0.0106 S12: -0.0581 S13: 0.1575 REMARK 3 S21: 0.0378 S22: -0.0724 S23: 0.1338 REMARK 3 S31: -0.2090 S32: -0.0035 S33: 0.0830 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 87 B 120 REMARK 3 ORIGIN FOR THE GROUP (A): -24.3550 -10.1310 27.7550 REMARK 3 T TENSOR REMARK 3 T11: 0.0017 T22: 0.0268 REMARK 3 T33: 0.0078 T12: -0.0155 REMARK 3 T13: -0.0024 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 0.4011 L22: 3.0113 REMARK 3 L33: 1.8965 L12: 0.1942 REMARK 3 L13: -0.0723 L23: 0.5012 REMARK 3 S TENSOR REMARK 3 S11: 0.0218 S12: -0.0687 S13: 0.0237 REMARK 3 S21: 0.0685 S22: -0.0305 S23: 0.2388 REMARK 3 S31: -0.2138 S32: -0.1265 S33: 0.0087 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 121 B 159 REMARK 3 ORIGIN FOR THE GROUP (A): -21.7120 2.5950 16.8150 REMARK 3 T TENSOR REMARK 3 T11: 0.0806 T22: -0.0424 REMARK 3 T33: 0.0565 T12: -0.0165 REMARK 3 T13: -0.0234 T23: -0.0022 REMARK 3 L TENSOR REMARK 3 L11: 1.9189 L22: 3.0539 REMARK 3 L33: 7.7503 L12: -0.0742 REMARK 3 L13: 0.1660 L23: -3.2639 REMARK 3 S TENSOR REMARK 3 S11: 0.0699 S12: 0.0638 S13: 0.0635 REMARK 3 S21: 0.1861 S22: 0.0042 S23: 0.0884 REMARK 3 S31: -0.3133 S32: 0.0721 S33: -0.0740 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 160 B 190 REMARK 3 ORIGIN FOR THE GROUP (A): -16.0750 5.9540 14.6670 REMARK 3 T TENSOR REMARK 3 T11: 0.0942 T22: -0.0225 REMARK 3 T33: 0.0151 T12: -0.0812 REMARK 3 T13: -0.0213 T23: 0.0369 REMARK 3 L TENSOR REMARK 3 L11: 2.6803 L22: 6.8260 REMARK 3 L33: 0.6124 L12: -0.8554 REMARK 3 L13: -0.3761 L23: -0.0518 REMARK 3 S TENSOR REMARK 3 S11: 0.0598 S12: 0.0201 S13: 0.2383 REMARK 3 S21: 0.0989 S22: -0.0290 S23: -0.2775 REMARK 3 S31: -0.3039 S32: 0.0355 S33: -0.0308 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 191 B 236 REMARK 3 ORIGIN FOR THE GROUP (A): -27.9140 8.1340 8.6660 REMARK 3 T TENSOR REMARK 3 T11: 0.0492 T22: 0.0035 REMARK 3 T33: -0.0003 T12: 0.0222 REMARK 3 T13: -0.0081 T23: 0.0259 REMARK 3 L TENSOR REMARK 3 L11: 0.5557 L22: 2.0815 REMARK 3 L33: 11.2350 L12: -0.2202 REMARK 3 L13: 0.0802 L23: -3.0886 REMARK 3 S TENSOR REMARK 3 S11: 0.0589 S12: 0.0845 S13: 0.0894 REMARK 3 S21: 0.1249 S22: 0.2215 S23: 0.2344 REMARK 3 S31: -0.1290 S32: -0.4802 S33: -0.2804 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 237 B 261 REMARK 3 ORIGIN FOR THE GROUP (A): -17.3940 -8.3990 13.3720 REMARK 3 T TENSOR REMARK 3 T11: -0.0006 T22: 0.0083 REMARK 3 T33: 0.0187 T12: -0.0153 REMARK 3 T13: -0.0076 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 1.2131 L22: 1.4468 REMARK 3 L33: 1.7956 L12: 0.1125 REMARK 3 L13: 0.1494 L23: -0.4483 REMARK 3 S TENSOR REMARK 3 S11: 0.0624 S12: 0.1415 S13: 0.0764 REMARK 3 S21: -0.0779 S22: -0.0806 S23: -0.0884 REMARK 3 S31: -0.1312 S32: 0.0256 S33: 0.0181 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 262 B 291 REMARK 3 ORIGIN FOR THE GROUP (A): -7.5360 -7.0210 12.1450 REMARK 3 T TENSOR REMARK 3 T11: -0.0570 T22: 0.0426 REMARK 3 T33: 0.0139 T12: -0.0637 REMARK 3 T13: 0.0173 T23: 0.0390 REMARK 3 L TENSOR REMARK 3 L11: 1.9971 L22: 3.0919 REMARK 3 L33: 2.7918 L12: -1.3353 REMARK 3 L13: -0.0612 L23: 0.0781 REMARK 3 S TENSOR REMARK 3 S11: 0.1105 S12: 0.2235 S13: 0.2497 REMARK 3 S21: -0.2763 S22: -0.1508 S23: -0.3452 REMARK 3 S31: -0.1859 S32: 0.4848 S33: 0.0404 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2IRY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-NOV-06. REMARK 100 THE RCSB ID CODE IS RCSB039941. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54180 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56549 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 40.490 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.700 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : 0.09500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.17500 REMARK 200 R SYM FOR SHELL (I) : 0.23700 REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NA HEPES, 0.01M MNCL2, 10%(V/V) REMARK 280 ISO-PROPANOL, 20% PEG 4000, 0.01M DGTP, PH 7.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 285K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.93500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 HIS A 3 REMARK 465 MET A 4 REMARK 465 ASP A 293 REMARK 465 ALA A 294 REMARK 465 PRO A 295 REMARK 465 VAL A 296 REMARK 465 ALA A 297 REMARK 465 ASP A 298 REMARK 465 ARG A 299 REMARK 465 LEU A 300 REMARK 465 THR A 301 REMARK 465 ARG A 302 REMARK 465 TYR A 303 REMARK 465 GLY B 1 REMARK 465 SER B 2 REMARK 465 HIS B 3 REMARK 465 MET B 4 REMARK 465 GLY B 5 REMARK 465 SER B 6 REMARK 465 ALA B 7 REMARK 465 SER B 8 REMARK 465 ALA B 292 REMARK 465 ASP B 293 REMARK 465 ALA B 294 REMARK 465 PRO B 295 REMARK 465 VAL B 296 REMARK 465 ALA B 297 REMARK 465 ASP B 298 REMARK 465 ARG B 299 REMARK 465 LEU B 300 REMARK 465 THR B 301 REMARK 465 ARG B 302 REMARK 465 TYR B 303 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1179 O HOH A 1425 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 34 O HOH B 1408 1665 2.16 REMARK 500 O HOH A 1245 O HOH B 1289 1565 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 97 21.19 -141.17 REMARK 500 SER A 177 -103.65 -112.13 REMARK 500 THR A 219 120.51 -37.25 REMARK 500 TYR A 244 -6.83 79.98 REMARK 500 ASP A 291 -161.34 -125.48 REMARK 500 LYS B 69 -65.84 -109.55 REMARK 500 ASP B 97 21.06 -145.15 REMARK 500 SER B 177 -113.84 -109.25 REMARK 500 TYR B 244 -5.11 73.25 REMARK 500 LEU B 268 128.64 -37.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1230 DISTANCE = 5.01 ANGSTROMS REMARK 525 HOH B1311 DISTANCE = 5.34 ANGSTROMS REMARK 525 HOH B1341 DISTANCE = 5.17 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 DGT B 1103 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1100 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 140 OD1 REMARK 620 2 HOH A1397 O 109.7 REMARK 620 3 DGT A1102 O2G 148.4 87.0 REMARK 620 4 HOH A1412 O 60.4 145.8 90.5 REMARK 620 5 ASP A 140 OD2 50.4 59.6 140.8 105.6 REMARK 620 6 DGT A1102 O2B 83.3 67.2 78.7 78.8 70.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1101 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 140 OD1 REMARK 620 2 DGT B1103 O3G 131.5 REMARK 620 3 HOH B1394 O 105.2 68.0 REMARK 620 4 ASP B 142 OD1 143.4 71.9 110.5 REMARK 620 5 HOH B1387 O 61.1 82.0 122.6 104.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 1100 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DGT A 1102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DGT B 1103 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2IRU RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE POLYMERASE DOMAIN FROM REMARK 900 MYCOBACTERIUM TUBERCULOSIS LIGASE D REMARK 900 RELATED ID: 2IRX RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE POLYMERASE DOMAIN FROM REMARK 900 MYCOBACTERIUM TUBERCULOSIS LIGASE D WITH GTP AND MANGANESE. DBREF 2IRY A 4 303 UNP P71571 Y938_MYCTU 1 300 DBREF 2IRY B 4 303 UNP P71571 Y938_MYCTU 1 300 SEQADV 2IRY GLY A 1 UNP P71571 EXPRESSION TAG SEQADV 2IRY SER A 2 UNP P71571 EXPRESSION TAG SEQADV 2IRY HIS A 3 UNP P71571 EXPRESSION TAG SEQADV 2IRY GLY B 1 UNP P71571 EXPRESSION TAG SEQADV 2IRY SER B 2 UNP P71571 EXPRESSION TAG SEQADV 2IRY HIS B 3 UNP P71571 EXPRESSION TAG SEQRES 1 A 303 GLY SER HIS MET GLY SER ALA SER GLU GLN ARG VAL THR SEQRES 2 A 303 LEU THR ASN ALA ASP LYS VAL LEU TYR PRO ALA THR GLY SEQRES 3 A 303 THR THR LYS SER ASP ILE PHE ASP TYR TYR ALA GLY VAL SEQRES 4 A 303 ALA GLU VAL MET LEU GLY HIS ILE ALA GLY ARG PRO ALA SEQRES 5 A 303 THR ARG LYS ARG TRP PRO ASN GLY VAL ASP GLN PRO ALA SEQRES 6 A 303 PHE PHE GLU LYS GLN LEU ALA LEU SER ALA PRO PRO TRP SEQRES 7 A 303 LEU SER ARG ALA THR VAL ALA HIS ARG SER GLY THR THR SEQRES 8 A 303 THR TYR PRO ILE ILE ASP SER ALA THR GLY LEU ALA TRP SEQRES 9 A 303 ILE ALA GLN GLN ALA ALA LEU GLU VAL HIS VAL PRO GLN SEQRES 10 A 303 TRP ARG PHE VAL ALA GLU PRO GLY SER GLY GLU LEU ASN SEQRES 11 A 303 PRO GLY PRO ALA THR ARG LEU VAL PHE ASP LEU ASP PRO SEQRES 12 A 303 GLY GLU GLY VAL MET MET ALA GLN LEU ALA GLU VAL ALA SEQRES 13 A 303 ARG ALA VAL ARG ASP LEU LEU ALA ASP ILE GLY LEU VAL SEQRES 14 A 303 THR PHE PRO VAL THR SER GLY SER LYS GLY LEU HIS LEU SEQRES 15 A 303 TYR THR PRO LEU ASP GLU PRO VAL SER SER ARG GLY ALA SEQRES 16 A 303 THR VAL LEU ALA LYS ARG VAL ALA GLN ARG LEU GLU GLN SEQRES 17 A 303 ALA MET PRO ALA LEU VAL THR SER THR MET THR LYS SER SEQRES 18 A 303 LEU ARG ALA GLY LYS VAL PHE VAL ASP TRP SER GLN ASN SEQRES 19 A 303 SER GLY SER LYS THR THR ILE ALA PRO TYR SER LEU ARG SEQRES 20 A 303 GLY ARG THR HIS PRO THR VAL ALA ALA PRO ARG THR TRP SEQRES 21 A 303 ALA GLU LEU ASP ASP PRO ALA LEU ARG GLN LEU SER TYR SEQRES 22 A 303 ASP GLU VAL LEU THR ARG ILE ALA ARG ASP GLY ASP LEU SEQRES 23 A 303 LEU GLU ARG LEU ASP ALA ASP ALA PRO VAL ALA ASP ARG SEQRES 24 A 303 LEU THR ARG TYR SEQRES 1 B 303 GLY SER HIS MET GLY SER ALA SER GLU GLN ARG VAL THR SEQRES 2 B 303 LEU THR ASN ALA ASP LYS VAL LEU TYR PRO ALA THR GLY SEQRES 3 B 303 THR THR LYS SER ASP ILE PHE ASP TYR TYR ALA GLY VAL SEQRES 4 B 303 ALA GLU VAL MET LEU GLY HIS ILE ALA GLY ARG PRO ALA SEQRES 5 B 303 THR ARG LYS ARG TRP PRO ASN GLY VAL ASP GLN PRO ALA SEQRES 6 B 303 PHE PHE GLU LYS GLN LEU ALA LEU SER ALA PRO PRO TRP SEQRES 7 B 303 LEU SER ARG ALA THR VAL ALA HIS ARG SER GLY THR THR SEQRES 8 B 303 THR TYR PRO ILE ILE ASP SER ALA THR GLY LEU ALA TRP SEQRES 9 B 303 ILE ALA GLN GLN ALA ALA LEU GLU VAL HIS VAL PRO GLN SEQRES 10 B 303 TRP ARG PHE VAL ALA GLU PRO GLY SER GLY GLU LEU ASN SEQRES 11 B 303 PRO GLY PRO ALA THR ARG LEU VAL PHE ASP LEU ASP PRO SEQRES 12 B 303 GLY GLU GLY VAL MET MET ALA GLN LEU ALA GLU VAL ALA SEQRES 13 B 303 ARG ALA VAL ARG ASP LEU LEU ALA ASP ILE GLY LEU VAL SEQRES 14 B 303 THR PHE PRO VAL THR SER GLY SER LYS GLY LEU HIS LEU SEQRES 15 B 303 TYR THR PRO LEU ASP GLU PRO VAL SER SER ARG GLY ALA SEQRES 16 B 303 THR VAL LEU ALA LYS ARG VAL ALA GLN ARG LEU GLU GLN SEQRES 17 B 303 ALA MET PRO ALA LEU VAL THR SER THR MET THR LYS SER SEQRES 18 B 303 LEU ARG ALA GLY LYS VAL PHE VAL ASP TRP SER GLN ASN SEQRES 19 B 303 SER GLY SER LYS THR THR ILE ALA PRO TYR SER LEU ARG SEQRES 20 B 303 GLY ARG THR HIS PRO THR VAL ALA ALA PRO ARG THR TRP SEQRES 21 B 303 ALA GLU LEU ASP ASP PRO ALA LEU ARG GLN LEU SER TYR SEQRES 22 B 303 ASP GLU VAL LEU THR ARG ILE ALA ARG ASP GLY ASP LEU SEQRES 23 B 303 LEU GLU ARG LEU ASP ALA ASP ALA PRO VAL ALA ASP ARG SEQRES 24 B 303 LEU THR ARG TYR HET MN A1100 1 HET MN B1101 1 HET DGT A1102 31 HET DGT B1103 20 HETNAM MN MANGANESE (II) ION HETNAM DGT 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE FORMUL 3 MN 2(MN 2+) FORMUL 5 DGT 2(C10 H16 N5 O13 P3) FORMUL 7 HOH *659(H2 O) HELIX 1 1 THR A 28 ALA A 48 1 21 HELIX 2 2 SER A 98 GLN A 108 1 11 HELIX 3 3 MET A 148 ASP A 165 1 18 HELIX 4 4 SER A 191 MET A 210 1 20 HELIX 5 5 THR A 219 ARG A 223 5 5 HELIX 6 6 TRP A 231 SER A 235 5 5 HELIX 7 7 THR A 259 ASP A 264 1 6 HELIX 8 8 SER A 272 GLY A 284 1 13 HELIX 9 9 THR B 28 ALA B 48 1 21 HELIX 10 10 SER B 98 GLN B 108 1 11 HELIX 11 11 MET B 148 ASP B 165 1 18 HELIX 12 12 SER B 191 MET B 210 1 20 HELIX 13 13 THR B 219 ARG B 223 5 5 HELIX 14 14 TRP B 231 SER B 235 5 5 HELIX 15 15 THR B 259 ASP B 264 1 6 HELIX 16 16 SER B 272 GLY B 284 1 13 SHEET 1 A 4 PHE A 66 GLU A 68 0 SHEET 2 A 4 THR A 53 ARG A 56 -1 N ARG A 54 O GLU A 68 SHEET 3 A 4 GLU A 112 VAL A 115 -1 O HIS A 114 N THR A 53 SHEET 4 A 4 THR A 240 ILE A 241 -1 O THR A 240 N VAL A 115 SHEET 1 B 2 SER A 80 ALA A 85 0 SHEET 2 B 2 THR A 90 ILE A 95 -1 O THR A 91 N VAL A 84 SHEET 1 C 4 TRP A 118 ALA A 122 0 SHEET 2 C 4 LEU A 129 PRO A 143 -1 O ASN A 130 N VAL A 121 SHEET 3 C 4 VAL A 227 ASP A 230 -1 O PHE A 228 N ASP A 142 SHEET 4 C 4 VAL A 214 THR A 215 1 N THR A 215 O VAL A 229 SHEET 1 D 5 TRP A 118 ALA A 122 0 SHEET 2 D 5 LEU A 129 PRO A 143 -1 O ASN A 130 N VAL A 121 SHEET 3 D 5 LEU A 180 VAL A 190 -1 O LEU A 180 N LEU A 141 SHEET 4 D 5 PHE A 171 THR A 174 -1 N VAL A 173 O HIS A 181 SHEET 5 D 5 ALA A 256 PRO A 257 -1 O ALA A 256 N THR A 174 SHEET 1 E 4 PHE B 66 GLU B 68 0 SHEET 2 E 4 THR B 53 ARG B 56 -1 N ARG B 56 O PHE B 66 SHEET 3 E 4 GLU B 112 VAL B 115 -1 O HIS B 114 N THR B 53 SHEET 4 E 4 THR B 240 ILE B 241 -1 O THR B 240 N VAL B 115 SHEET 1 F 2 SER B 80 HIS B 86 0 SHEET 2 F 2 GLY B 89 ILE B 95 -1 O TYR B 93 N ALA B 82 SHEET 1 G 4 TRP B 118 ALA B 122 0 SHEET 2 G 4 LEU B 129 PRO B 143 -1 O ASN B 130 N VAL B 121 SHEET 3 G 4 VAL B 227 ASP B 230 -1 O PHE B 228 N ASP B 142 SHEET 4 G 4 VAL B 214 THR B 215 1 N THR B 215 O VAL B 229 SHEET 1 H 5 TRP B 118 ALA B 122 0 SHEET 2 H 5 LEU B 129 PRO B 143 -1 O ASN B 130 N VAL B 121 SHEET 3 H 5 LEU B 180 VAL B 190 -1 O LEU B 180 N LEU B 141 SHEET 4 H 5 PHE B 171 THR B 174 -1 N VAL B 173 O HIS B 181 SHEET 5 H 5 ALA B 256 PRO B 257 -1 O ALA B 256 N THR B 174 LINK OD1 ASP A 140 MN MN A1100 1555 1555 2.48 LINK OD1 ASP B 140 MN MN B1101 1555 1555 2.45 LINK MN MN A1100 O HOH A1397 1555 1555 2.20 LINK MN MN A1100 O2G DGT A1102 1555 1555 2.08 LINK MN MN A1100 O HOH A1412 1555 1555 2.45 LINK MN MN B1101 O3G DGT B1103 1555 1555 2.27 LINK MN MN B1101 O HOH B1394 1555 1555 2.15 LINK MN MN A1100 OD2 ASP A 140 1555 1555 2.66 LINK MN MN A1100 O2B DGT A1102 1555 1555 2.74 LINK MN MN B1101 OD1 ASP B 142 1555 1555 2.67 LINK MN MN B1101 O HOH B1387 1555 1555 2.66 SITE 1 AC1 5 ASP A 140 ASP A 142 DGT A1102 HOH A1397 SITE 2 AC1 5 HOH A1412 SITE 1 AC2 5 ASP B 140 ASP B 142 DGT B1103 HOH B1387 SITE 2 AC2 5 HOH B1394 SITE 1 AC3 21 PHE A 67 LYS A 69 ASP A 140 ASP A 142 SITE 2 AC3 21 SER A 175 SER A 177 LYS A 178 GLY A 179 SITE 3 AC3 21 HIS A 181 GLN A 233 THR A 239 ARG A 247 SITE 4 AC3 21 MN A1100 HOH A1396 HOH A1397 HOH A1400 SITE 5 AC3 21 HOH A1401 HOH A1404 HOH A1412 HOH A1420 SITE 6 AC3 21 HOH A1426 SITE 1 AC4 13 ASP B 140 ASP B 142 SER B 175 SER B 177 SITE 2 AC4 13 LYS B 178 GLY B 179 HIS B 181 ILE B 241 SITE 3 AC4 13 ARG B 247 MN B1101 HOH B1387 HOH B1391 SITE 4 AC4 13 HOH B1394 CRYST1 41.221 75.870 95.809 90.00 92.59 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024260 0.000000 0.001098 0.00000 SCALE2 0.000000 0.013180 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010448 0.00000 MASTER 687 0 4 16 30 0 14 6 0 0 0 48 END