HEADER OXIDOREDUCTASE 06-OCT-06 2IND TITLE MN(II) RECONSTITUTED TOLUENE/O-XYLENE MONOOXYGENASE HYDROXYLASE X-RAY TITLE 2 CRYSTAL STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOLUENE, O-XYLENE MONOOXYGENASE OXYGENASE SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: TOLUENE, O-XYLENE MONOOXYGENASE OXYGENASE SUBUNIT; COMPND 7 CHAIN: B; COMPND 8 SYNONYM: TOLUENE O-XYLENE MONOOXYGENASE COMPONENT; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: TOUB PROTEIN; COMPND 12 CHAIN: C; COMPND 13 SYNONYM: TOLUENE O-XYLENE MONOOXYGENASE COMPONENT; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS STUTZERI; SOURCE 3 ORGANISM_TAXID: 316; SOURCE 4 STRAIN: OX1; SOURCE 5 GENE: TOUA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B(+); SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: PSEUDOMONAS STUTZERI; SOURCE 13 ORGANISM_TAXID: 316; SOURCE 14 STRAIN: OX1; SOURCE 15 GENE: TOUE; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET22B(+); SOURCE 21 MOL_ID: 3; SOURCE 22 ORGANISM_SCIENTIFIC: PSEUDOMONAS STUTZERI; SOURCE 23 ORGANISM_TAXID: 316; SOURCE 24 STRAIN: OX1; SOURCE 25 GENE: TOUB; SOURCE 26 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 27 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 28 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 29 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 30 EXPRESSION_SYSTEM_PLASMID: PET22B(+) KEYWDS MANGANESE RECONSTITUTION, 4-HELIX BUNDLE, CARBOXYLATE BRIDGE, KEYWDS 2 METALLOENZYME, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.S.MCCORMICK,M.H.SAZINSKY,K.L.CONDON,S.J.LIPPARD REVDAT 3 18-OCT-17 2IND 1 REMARK REVDAT 2 24-FEB-09 2IND 1 VERSN REVDAT 1 05-DEC-06 2IND 0 JRNL AUTH M.S.MCCORMICK,M.H.SAZINSKY,K.L.CONDON,S.J.LIPPARD JRNL TITL X-RAY CRYSTAL STRUCTURES OF MANGANESE(II)-RECONSTITUTED AND JRNL TITL 2 NATIVE TOLUENE/O-XYLENE MONOOXYGENASE HYDROXYLASE REVEAL JRNL TITL 3 ROTAMER SHIFTS IN CONSERVED RESIDUES AND AN ENHANCED VIEW OF JRNL TITL 4 THE PROTEIN INTERIOR. JRNL REF J.AM.CHEM.SOC. V. 128 15108 2006 JRNL REFN ISSN 0002-7863 JRNL PMID 17117860 JRNL DOI 10.1021/JA064837R REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 89.0 REMARK 3 NUMBER OF REFLECTIONS : 58566 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.500 REMARK 3 FREE R VALUE TEST SET COUNT : 2972 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.28 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.4310 REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7346 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 141 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 17.74700 REMARK 3 B22 (A**2) : 17.74700 REMARK 3 B33 (A**2) : -35.49400 REMARK 3 B12 (A**2) : 4.60800 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.237 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.999 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.934 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.797 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 40.01 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR:PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CNS_TOPPAR:DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : CNS_TOPPAR:WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : CNS_TOPPAR:ION.PARAM REMARK 3 PARAMETER FILE 5 : P6G_XPLOR_PAR.TXT REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : CNS_TOPPAR:PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CNS_TOPPAR:DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : CNS_TOPPAR:WATER.TOP REMARK 3 TOPOLOGY FILE 4 : CNS_TOPPAR:ION.TOP REMARK 3 TOPOLOGY FILE 5 : P6G_XPLOR_TOP.TXT REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2IND COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-OCT-06. REMARK 100 THE DEPOSITION ID IS D_1000039781. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : FLAT COLLIMATING MIRROR, DOUBLE REMARK 200 CRYSTAL MONOCHROMATOR, TOROID REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64565 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06900 REMARK 200 FOR THE DATA SET : 17.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.43100 REMARK 200 R SYM FOR SHELL (I) : 0.43100 REMARK 200 FOR SHELL : 4.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB CODE 1T0Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES PH 7.5, 2.1-2.5 M REMARK 280 AMMONIUM SULFATE, 2-4% PEG 400, 10-20 MM MANGANESE CHLORIDE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 22.59733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 45.19467 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 45.19467 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 22.59733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE SECOND HALF OF THE DIMERIC BIOLOGICAL ASSEMBLY IS REMARK 300 GENERATED BY THE TWO FOLD AXIS: -X, -X+Y, (-Z+1/3)-5/3 REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -112.98667 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 119 CD GLU B 119 OE2 0.082 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 15 69.81 -101.92 REMARK 500 LYS A 21 -36.44 -138.37 REMARK 500 LEU A 192 -64.22 -93.41 REMARK 500 PHE A 200 -63.33 -125.59 REMARK 500 ASN A 248 -147.68 -111.86 REMARK 500 TYR A 279 -32.90 -139.43 REMARK 500 ILE A 298 -52.82 -122.53 REMARK 500 GLU A 326 -68.18 -124.68 REMARK 500 THR A 327 -64.95 -23.88 REMARK 500 THR A 368 -83.09 -112.48 REMARK 500 MET A 399 -65.63 -120.78 REMARK 500 HIS A 406 -161.07 -170.73 REMARK 500 PRO A 408 -163.31 -105.28 REMARK 500 LYS A 411 35.89 -85.31 REMARK 500 ASN A 413 49.19 -159.32 REMARK 500 ASP A 440 61.86 -158.04 REMARK 500 LYS A 445 -70.34 -33.46 REMARK 500 TYR A 491 54.76 -118.99 REMARK 500 ARG B 44 82.12 -154.70 REMARK 500 CYS B 62 -67.24 -107.59 REMARK 500 TYR B 125 -64.61 -106.79 REMARK 500 ASN C 9 75.84 -108.52 REMARK 500 ARG C 12 -5.46 75.24 REMARK 500 ASP C 25 160.46 -46.73 REMARK 500 SER C 38 -54.04 -131.10 REMARK 500 ARG C 42 21.70 -156.79 REMARK 500 LEU C 73 140.65 60.07 REMARK 500 MET C 84 -146.64 -137.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 501 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 134 OE1 REMARK 620 2 GLU A 197 OE2 94.7 REMARK 620 3 GLU A 231 OE2 165.6 96.5 REMARK 620 4 HOH A 504 O 84.1 95.4 85.9 REMARK 620 5 GLU A 231 OE1 112.8 152.0 57.4 92.8 REMARK 620 6 HIS A 234 NE2 91.5 96.5 96.2 167.6 78.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 502 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 134 OE2 REMARK 620 2 HOH A 504 O 81.6 REMARK 620 3 GLU A 231 OE1 91.0 80.7 REMARK 620 4 HOH A 505 O 168.4 86.9 87.3 REMARK 620 5 HIS A 137 ND1 97.0 165.9 85.4 94.3 REMARK 620 6 GLU A 104 OE2 93.1 84.0 163.4 85.4 110.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P6G A 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1T0Q RELATED DB: PDB REMARK 900 SAME PROTEIN BUT IN THE NATIVE IRON-CONTAINING FORM. DBREF 2IND A 2 492 UNP O87798 O87798_PSEST 2 492 DBREF 2IND B 8 330 UNP O87802 O87802_PSEST 8 330 DBREF 2IND C 3 85 UNP O87799 O87799_PSEST 3 85 SEQRES 1 A 491 SER MET LEU LYS ARG GLU ASP TRP TYR ASP LEU THR ARG SEQRES 2 A 491 THR THR ASN TRP THR PRO LYS TYR VAL THR GLU ASN GLU SEQRES 3 A 491 LEU PHE PRO GLU GLU MET SER GLY ALA ARG GLY ILE SER SEQRES 4 A 491 MET GLU ALA TRP GLU LYS TYR ASP GLU PRO TYR LYS ILE SEQRES 5 A 491 THR TYR PRO GLU TYR VAL SER ILE GLN ARG GLU LYS ASP SEQRES 6 A 491 SER GLY ALA TYR SER ILE LYS ALA ALA LEU GLU ARG ASP SEQRES 7 A 491 GLY PHE VAL ASP ARG ALA ASP PRO GLY TRP VAL SER THR SEQRES 8 A 491 MET GLN LEU HIS PHE GLY ALA ILE ALA LEU GLU GLU TYR SEQRES 9 A 491 ALA ALA SER THR ALA GLU ALA ARG MET ALA ARG PHE ALA SEQRES 10 A 491 LYS ALA PRO GLY ASN ARG ASN MET ALA THR PHE GLY MET SEQRES 11 A 491 MET ASP GLU ASN ARG HIS GLY GLN ILE GLN LEU TYR PHE SEQRES 12 A 491 PRO TYR ALA ASN VAL LYS ARG SER ARG LYS TRP ASP TRP SEQRES 13 A 491 ALA HIS LYS ALA ILE HIS THR ASN GLU TRP ALA ALA ILE SEQRES 14 A 491 ALA ALA ARG SER PHE PHE ASP ASP MET MET MET THR ARG SEQRES 15 A 491 ASP SER VAL ALA VAL SER ILE MET LEU THR PHE ALA PHE SEQRES 16 A 491 GLU THR GLY PHE THR ASN MET GLN PHE LEU GLY LEU ALA SEQRES 17 A 491 ALA ASP ALA ALA GLU ALA GLY ASP HIS THR PHE ALA SER SEQRES 18 A 491 LEU ILE SER SER ILE GLN THR ASP GLU SER ARG HIS ALA SEQRES 19 A 491 GLN GLN GLY GLY PRO SER LEU LYS ILE LEU VAL GLU ASN SEQRES 20 A 491 GLY LYS LYS ASP GLU ALA GLN GLN MET VAL ASP VAL ALA SEQRES 21 A 491 ILE TRP ARG SER TRP LYS LEU PHE SER VAL LEU THR GLY SEQRES 22 A 491 PRO ILE MET ASP TYR TYR THR PRO LEU GLU SER ARG ASN SEQRES 23 A 491 GLN SER PHE LYS GLU PHE MET LEU GLU TRP ILE VAL ALA SEQRES 24 A 491 GLN PHE GLU ARG GLN LEU LEU ASP LEU GLY LEU ASP LYS SEQRES 25 A 491 PRO TRP TYR TRP ASP GLN PHE MET GLN ASP LEU ASP GLU SEQRES 26 A 491 THR HIS HIS GLY MET HIS LEU GLY VAL TRP TYR TRP ARG SEQRES 27 A 491 PRO THR VAL TRP TRP ASP PRO ALA ALA GLY VAL SER PRO SEQRES 28 A 491 GLU GLU ARG GLU TRP LEU GLU GLU LYS TYR PRO GLY TRP SEQRES 29 A 491 ASN ASP THR TRP GLY GLN CYS TRP ASP VAL ILE THR ASP SEQRES 30 A 491 ASN LEU VAL ASN GLY LYS PRO GLU LEU THR VAL PRO GLU SEQRES 31 A 491 THR LEU PRO THR ILE CYS ASN MET CYS ASN LEU PRO ILE SEQRES 32 A 491 ALA HIS THR PRO GLY ASN LYS TRP ASN VAL LYS ASP TYR SEQRES 33 A 491 GLN LEU GLU TYR GLU GLY ARG LEU TYR HIS PHE GLY SER SEQRES 34 A 491 GLU ALA ASP ARG TRP CYS PHE GLN ILE ASP PRO GLU ARG SEQRES 35 A 491 TYR LYS ASN HIS THR ASN LEU VAL ASP ARG PHE LEU LYS SEQRES 36 A 491 GLY GLU ILE GLN PRO ALA ASP LEU ALA GLY ALA LEU MET SEQRES 37 A 491 TYR MET SER LEU GLU PRO GLY VAL MET GLY ASP ASP ALA SEQRES 38 A 491 HIS ASP TYR GLU TRP VAL LYS ALA TYR GLN SEQRES 1 B 323 ALA LEU LYS PRO LEU LYS THR TRP SER HIS LEU ALA GLY SEQRES 2 B 323 ASN ARG ARG ARG PRO SER GLU TYR GLU VAL VAL SER THR SEQRES 3 B 323 ASN LEU HIS TYR PHE THR ASP ASN PRO GLU ARG PRO TRP SEQRES 4 B 323 GLU LEU ASP SER ASN LEU PRO MET GLN THR TRP TYR LYS SEQRES 5 B 323 LYS TYR CYS PHE ASP SER PRO LEU LYS HIS ASP ASP TRP SEQRES 6 B 323 ASN ALA PHE ARG ASP PRO ASP GLN LEU VAL TYR ARG THR SEQRES 7 B 323 TYR ASN LEU LEU GLN ASP GLY GLN GLU SER TYR VAL GLN SEQRES 8 B 323 GLY LEU PHE ASP GLN LEU ASN ASP ARG GLY HIS ASP GLN SEQRES 9 B 323 MET LEU THR ARG GLU TRP VAL GLU THR LEU ALA ARG PHE SEQRES 10 B 323 TYR THR PRO ALA ARG TYR LEU PHE HIS ALA LEU GLN MET SEQRES 11 B 323 GLY SER VAL TYR ILE HIS GLN ILE ALA PRO ALA SER THR SEQRES 12 B 323 ILE THR ASN CYS ALA THR TYR GLU THR ALA ASP HIS LEU SEQRES 13 B 323 ARG TRP LEU THR HIS THR ALA TYR ARG THR ARG GLU LEU SEQRES 14 B 323 ALA ASN CYS TYR PRO ASP VAL GLY PHE GLY LYS ARG GLU SEQRES 15 B 323 ARG ASP VAL TRP GLU ASN ASP PRO ALA TRP GLN GLY PHE SEQRES 16 B 323 ARG GLU LEU ILE GLU LYS ALA LEU ILE ALA TRP ASP TRP SEQRES 17 B 323 GLY GLU ALA PHE THR ALA ILE ASN LEU VAL THR LYS PRO SEQRES 18 B 323 ALA VAL GLU GLU ALA LEU LEU GLN GLN LEU GLY SER LEU SEQRES 19 B 323 ALA GLN SER GLU GLY ASP THR LEU LEU GLY LEU LEU ALA SEQRES 20 B 323 GLN ALA GLN LYS ARG ASP ALA GLU ARG HIS ARG ARG TRP SEQRES 21 B 323 SER SER ALA LEU VAL LYS MET ALA LEU GLU LYS GLU GLY SEQRES 22 B 323 ASN ARG GLU VAL LEU GLN LYS TRP VAL ALA LYS TRP GLU SEQRES 23 B 323 PRO LEU ALA ASP LYS ALA ILE GLU ALA TYR CYS SER ALA SEQRES 24 B 323 LEU PRO ASP GLY GLU ASN ALA ILE VAL GLU ALA LYS SER SEQRES 25 B 323 ALA SER ARG TYR VAL ARG GLN MET MET GLY LEU SEQRES 1 C 83 THR PHE PRO ILE MET SER ASN PHE GLU ARG ASP PHE VAL SEQRES 2 C 83 ILE GLN LEU VAL PRO VAL ASP THR GLU ASP THR MET ASP SEQRES 3 C 83 GLN VAL ALA GLU LYS CYS ALA TYR HIS SER ILE ASN ARG SEQRES 4 C 83 ARG VAL HIS PRO GLN PRO GLU LYS ILE LEU ARG VAL ARG SEQRES 5 C 83 ARG HIS GLU ASP GLY THR LEU PHE PRO ARG GLY MET ILE SEQRES 6 C 83 VAL SER ASP ALA GLY LEU ARG PRO THR GLU THR LEU ASP SEQRES 7 C 83 ILE ILE PHE MET ASP HET MN A 501 1 HET MN A 502 1 HET P6G A 503 19 HETNAM MN MANGANESE (II) ION HETNAM P6G HEXAETHYLENE GLYCOL HETSYN P6G POLYETHYLENE GLYCOL PEG400 FORMUL 4 MN 2(MN 2+) FORMUL 6 P6G C12 H26 O7 FORMUL 7 HOH *141(H2 O) HELIX 1 1 LYS A 5 ARG A 14 1 10 HELIX 2 2 THR A 24 PHE A 29 1 6 HELIX 3 3 PRO A 30 GLY A 35 1 6 HELIX 4 4 SER A 40 GLU A 45 1 6 HELIX 5 5 THR A 54 GLU A 77 1 24 HELIX 6 6 ARG A 78 ARG A 84 5 7 HELIX 7 7 ASP A 86 ALA A 118 1 33 HELIX 8 8 ALA A 120 PHE A 144 1 25 HELIX 9 9 PRO A 145 VAL A 149 5 5 HELIX 10 10 SER A 152 TRP A 155 5 4 HELIX 11 11 ASP A 156 ALA A 161 1 6 HELIX 12 12 ILE A 162 THR A 164 5 3 HELIX 13 13 GLU A 166 MET A 180 1 15 HELIX 14 14 ASP A 184 LEU A 192 1 9 HELIX 15 15 PHE A 200 GLY A 216 1 17 HELIX 16 16 ASP A 217 ALA A 235 1 19 HELIX 17 17 GLN A 237 GLU A 247 1 11 HELIX 18 18 LYS A 250 THR A 273 1 24 HELIX 19 19 THR A 273 TYR A 280 1 8 HELIX 20 20 PRO A 282 ARG A 286 5 5 HELIX 21 21 SER A 289 ILE A 298 1 10 HELIX 22 22 ILE A 298 LEU A 309 1 12 HELIX 23 23 TYR A 316 LEU A 324 1 9 HELIX 24 24 GLU A 326 TRP A 338 1 13 HELIX 25 25 ARG A 339 VAL A 342 5 4 HELIX 26 26 SER A 351 TYR A 362 1 12 HELIX 27 27 THR A 368 ASN A 382 1 15 HELIX 28 28 LYS A 384 THR A 388 5 5 HELIX 29 29 SER A 430 ILE A 439 1 10 HELIX 30 30 ASP A 440 TYR A 444 5 5 HELIX 31 31 ASN A 449 LYS A 456 1 8 HELIX 32 32 ASP A 463 MET A 471 1 9 HELIX 33 33 TYR A 485 LYS A 489 5 5 HELIX 34 34 TRP B 15 ALA B 19 5 5 HELIX 35 35 SER B 26 THR B 33 1 8 HELIX 36 36 LEU B 52 CYS B 62 1 11 HELIX 37 37 ASP B 71 PHE B 75 5 5 HELIX 38 38 VAL B 82 ARG B 107 1 26 HELIX 39 39 THR B 114 TYR B 125 1 12 HELIX 40 40 PRO B 127 ALA B 146 1 20 HELIX 41 41 ALA B 148 TYR B 180 1 33 HELIX 42 42 ARG B 188 ASP B 196 1 9 HELIX 43 43 ASP B 196 LEU B 210 1 15 HELIX 44 44 ASP B 214 LEU B 224 1 11 HELIX 45 45 VAL B 225 LEU B 235 1 11 HELIX 46 46 LEU B 235 GLU B 245 1 11 HELIX 47 47 ASP B 247 LEU B 276 1 30 HELIX 48 48 GLY B 280 SER B 305 1 26 HELIX 49 49 ASP B 309 MET B 327 1 19 HELIX 50 50 THR C 26 TYR C 36 1 11 SHEET 1 A 2 LEU A 419 TYR A 421 0 SHEET 2 A 2 ARG A 424 TYR A 426 -1 O TYR A 426 N LEU A 419 SHEET 1 B 4 GLN C 17 VAL C 21 0 SHEET 2 B 4 PHE C 4 PHE C 10 -1 N SER C 8 O GLN C 17 SHEET 3 B 4 THR C 78 MET C 84 1 O LEU C 79 N MET C 7 SHEET 4 B 4 ILE C 50 ARG C 55 -1 N ILE C 50 O MET C 84 LINK MN MN A 501 OE1 GLU A 134 1555 1555 2.34 LINK MN MN A 501 OE2 GLU A 197 1555 1555 2.04 LINK MN MN A 501 OE2 GLU A 231 1555 1555 2.20 LINK MN MN A 501 O HOH A 504 1555 1555 2.22 LINK MN MN A 501 OE1 GLU A 231 1555 1555 2.34 LINK MN MN A 501 NE2 HIS A 234 1555 1555 2.32 LINK MN MN A 502 OE2 GLU A 134 1555 1555 2.11 LINK MN MN A 502 O HOH A 504 1555 1555 2.76 LINK MN MN A 502 OE1 GLU A 231 1555 1555 2.32 LINK MN MN A 502 O HOH A 505 1555 1555 2.09 LINK MN MN A 502 ND1 HIS A 137 1555 1555 2.17 LINK MN MN A 502 OE2 GLU A 104 1555 1555 2.26 CISPEP 1 GLN A 460 PRO A 461 0 -0.31 SITE 1 AC1 6 GLU A 134 GLU A 197 GLU A 231 HIS A 234 SITE 2 AC1 6 MN A 502 HOH A 504 SITE 1 AC2 7 GLU A 104 GLU A 134 HIS A 137 GLU A 231 SITE 2 AC2 7 MN A 501 HOH A 504 HOH A 505 SITE 1 AC3 12 ILE A 100 GLU A 104 PHE A 196 THR A 201 SITE 2 AC3 12 GLN A 204 GLY A 207 LEU A 208 ASP A 211 SITE 3 AC3 12 LEU A 272 THR A 273 MET A 277 HOH A 504 CRYST1 182.521 182.521 67.792 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005479 0.003163 0.000000 0.00000 SCALE2 0.000000 0.006326 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014751 0.00000 MASTER 341 0 3 50 6 0 7 6 0 0 0 70 END