HEADER HYDROLASE 17-JUL-06 2HP9 TITLE CRYSTAL STRUCTURE OF THE OXA-10 W154A MUTANT AT PH 6.0 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE PSE-2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BETA LACTAMASE OXA-10; COMPND 5 EC: 3.5.2.6; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: PSE2, OXA10; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) HOTSTAR; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET22BKANR KEYWDS CLASS D BETA-LACTAMASE, LYSINE CARBOXYLATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.KERFF,C.FALZONE,R.HERMAN,E.SAUVAGE,P.CHARLIER REVDAT 5 20-OCT-21 2HP9 1 REMARK SEQADV REVDAT 4 13-JUL-11 2HP9 1 VERSN REVDAT 3 11-AUG-10 2HP9 1 JRNL REVDAT 2 24-FEB-09 2HP9 1 VERSN REVDAT 1 03-JUL-07 2HP9 0 JRNL AUTH S.BAURIN,L.VERCHEVAL,F.BOUILLENNE,C.FALZONE,A.BRANS, JRNL AUTH 2 L.JACQUAMET,J.L.FERRER,E.SAUVAGE,D.DEHARENG,J.M.FRERE, JRNL AUTH 3 P.CHARLIER,M.GALLENI,F.KERFF JRNL TITL CRITICAL ROLE OF TRYPTOPHAN 154 FOR THE ACTIVITY AND JRNL TITL 2 STABILITY OF CLASS D BETA-LACTAMASES. JRNL REF BIOCHEMISTRY V. 48 11252 2009 JRNL REFN ISSN 0006-2960 JRNL PMID 19860471 JRNL DOI 10.1021/BI901548C REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.17 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 19186 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1395 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.79 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE SET COUNT : 68 REMARK 3 BIN FREE R VALUE : 0.3210 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3860 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 240 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 28.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.67000 REMARK 3 B22 (A**2) : 3.87000 REMARK 3 B33 (A**2) : -2.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.641 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.311 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.230 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 19.347 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.914 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.848 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3956 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5346 ; 0.940 ; 1.952 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 489 ; 4.619 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 174 ;39.059 ;25.172 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 713 ;13.802 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;10.444 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 587 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2932 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1937 ; 0.178 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2741 ; 0.295 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 227 ; 0.120 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 30 ; 0.132 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.116 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2528 ; 0.926 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3924 ; 1.511 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1667 ; 0.788 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1422 ; 1.187 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 21 A 66 REMARK 3 RESIDUE RANGE : A 193 A 264 REMARK 3 ORIGIN FOR THE GROUP (A): 4.7001 0.5218 55.4411 REMARK 3 T TENSOR REMARK 3 T11: -0.0649 T22: -0.1341 REMARK 3 T33: -0.0284 T12: -0.0515 REMARK 3 T13: 0.0150 T23: -0.0647 REMARK 3 L TENSOR REMARK 3 L11: 3.2031 L22: 1.4759 REMARK 3 L33: 2.8359 L12: -1.4928 REMARK 3 L13: -0.0588 L23: 0.0613 REMARK 3 S TENSOR REMARK 3 S11: 0.0835 S12: 0.0651 S13: -0.2846 REMARK 3 S21: -0.1147 S22: -0.0484 S23: 0.1599 REMARK 3 S31: 0.2258 S32: -0.1902 S33: -0.0351 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 67 A 192 REMARK 3 ORIGIN FOR THE GROUP (A): 15.2620 13.8787 66.6466 REMARK 3 T TENSOR REMARK 3 T11: -0.0323 T22: -0.0652 REMARK 3 T33: -0.0711 T12: 0.0120 REMARK 3 T13: -0.0265 T23: 0.0168 REMARK 3 L TENSOR REMARK 3 L11: 1.6997 L22: 0.7428 REMARK 3 L33: 1.8249 L12: -0.4516 REMARK 3 L13: -0.6159 L23: 0.5180 REMARK 3 S TENSOR REMARK 3 S11: -0.0049 S12: -0.0365 S13: -0.0661 REMARK 3 S21: 0.0824 S22: 0.0466 S23: -0.0365 REMARK 3 S31: -0.0159 S32: 0.0988 S33: -0.0417 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 21 B 66 REMARK 3 RESIDUE RANGE : B 193 B 265 REMARK 3 ORIGIN FOR THE GROUP (A): 3.9163 -7.6832 92.2655 REMARK 3 T TENSOR REMARK 3 T11: -0.1263 T22: -0.0356 REMARK 3 T33: -0.0650 T12: -0.0669 REMARK 3 T13: 0.0138 T23: 0.0274 REMARK 3 L TENSOR REMARK 3 L11: 2.2021 L22: 1.8017 REMARK 3 L33: 3.0104 L12: 0.5817 REMARK 3 L13: 0.6630 L23: 0.2631 REMARK 3 S TENSOR REMARK 3 S11: 0.0344 S12: -0.1163 S13: -0.2916 REMARK 3 S21: 0.0115 S22: -0.0409 S23: 0.0826 REMARK 3 S31: 0.0562 S32: -0.4489 S33: 0.0065 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 67 B 192 REMARK 3 ORIGIN FOR THE GROUP (A): 21.4504 -13.3678 83.7703 REMARK 3 T TENSOR REMARK 3 T11: -0.0604 T22: -0.1815 REMARK 3 T33: 0.0974 T12: 0.0228 REMARK 3 T13: 0.0369 T23: 0.0382 REMARK 3 L TENSOR REMARK 3 L11: 2.0544 L22: 2.0994 REMARK 3 L33: 4.3908 L12: -0.2534 REMARK 3 L13: -0.0838 L23: -0.1105 REMARK 3 S TENSOR REMARK 3 S11: 0.0171 S12: 0.0534 S13: -0.3814 REMARK 3 S21: -0.2276 S22: -0.1369 S23: -0.2870 REMARK 3 S31: 0.4833 S32: 0.1347 S33: 0.1199 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2HP9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JUL-06. REMARK 100 THE DEPOSITION ID IS D_1000038604. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAR-05 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20280 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 19.170 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.13300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.40300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ID 2HP5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M AMMONIUM SULFATE, BICINE PH9; THE REMARK 280 CRYSTAL WAS SOAKED AT PH6 (MES) FOR 6 DAYS., PH 6.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.16500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.64500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.21500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.64500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.16500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.21500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER, COMPOSED FROM THE TWO REMARK 300 CHAINS A AND B PRESENT IN THE ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 19 REMARK 465 GLY A 20 REMARK 465 GLY A 265 REMARK 465 GLY A 266 REMARK 465 GLY B 266 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 46 -50.90 69.29 REMARK 500 ALA A 66 -136.13 50.53 REMARK 500 ASN A 85 -169.97 -165.94 REMARK 500 LYS A 152 14.95 -151.98 REMARK 500 PHE A 208 105.72 -160.71 REMARK 500 GLU A 229 -127.10 52.68 REMARK 500 ALA B 66 -133.89 52.56 REMARK 500 GLU B 229 -133.31 55.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1K4F RELATED DB: PDB REMARK 900 1K4F IS THE CRYSTAL STRUCTURE OF THE WILD TYPE PROTEIN OXA-10 REMARK 900 RELATED ID: 2HP5 RELATED DB: PDB REMARK 900 2HP5 IS THE CRYSTAL STRUCTURE OF THE OXA-10 W154G MUTANT AT PH 7.0 REMARK 900 RELATED ID: 2HP6 RELATED DB: PDB REMARK 900 2HP6 IS THE CRYSTAL STRUCTURE OF THE OXA-10 W154A MUTANT AT PH 7.5 REMARK 900 RELATED ID: 2HPB RELATED DB: PDB REMARK 900 2HPB IS THE CRYSTAL STRUCTURE OF THE OXA-10 W154A MUTANT AT PH 9.0 DBREF 2HP9 A 20 266 UNP P14489 BLP2_PSEAE 20 266 DBREF 2HP9 B 20 266 UNP P14489 BLP2_PSEAE 20 266 SEQADV 2HP9 MET A 19 UNP P14489 CLONING ARTIFACT SEQADV 2HP9 ALA A 154 UNP P14489 TRP 154 ENGINEERED MUTATION SEQADV 2HP9 MET B 19 UNP P14489 CLONING ARTIFACT SEQADV 2HP9 ALA B 154 UNP P14489 TRP 154 ENGINEERED MUTATION SEQRES 1 A 248 MET GLY SER ILE THR GLU ASN THR SER TRP ASN LYS GLU SEQRES 2 A 248 PHE SER ALA GLU ALA VAL ASN GLY VAL PHE VAL LEU CYS SEQRES 3 A 248 LYS SER SER SER LYS SER CYS ALA THR ASN ASP LEU ALA SEQRES 4 A 248 ARG ALA SER LYS GLU TYR LEU PRO ALA SER THR PHE LYS SEQRES 5 A 248 ILE PRO ASN ALA ILE ILE GLY LEU GLU THR GLY VAL ILE SEQRES 6 A 248 LYS ASN GLU HIS GLN VAL PHE LYS TRP ASP GLY LYS PRO SEQRES 7 A 248 ARG ALA MET LYS GLN TRP GLU ARG ASP LEU THR LEU ARG SEQRES 8 A 248 GLY ALA ILE GLN VAL SER ALA VAL PRO VAL PHE GLN GLN SEQRES 9 A 248 ILE ALA ARG GLU VAL GLY GLU VAL ARG MET GLN LYS TYR SEQRES 10 A 248 LEU LYS LYS PHE SER TYR GLY ASN GLN ASN ILE SER GLY SEQRES 11 A 248 GLY ILE ASP LYS PHE ALA LEU GLU GLY GLN LEU ARG ILE SEQRES 12 A 248 SER ALA VAL ASN GLN VAL GLU PHE LEU GLU SER LEU TYR SEQRES 13 A 248 LEU ASN LYS LEU SER ALA SER LYS GLU ASN GLN LEU ILE SEQRES 14 A 248 VAL LYS GLU ALA LEU VAL THR GLU ALA ALA PRO GLU TYR SEQRES 15 A 248 LEU VAL HIS SER LYS THR GLY PHE SER GLY VAL GLY THR SEQRES 16 A 248 GLU SER ASN PRO GLY VAL ALA TRP TRP VAL GLY TRP VAL SEQRES 17 A 248 GLU LYS GLU THR GLU VAL TYR PHE PHE ALA PHE ASN MET SEQRES 18 A 248 ASP ILE ASP ASN GLU SER LYS LEU PRO LEU ARG LYS SER SEQRES 19 A 248 ILE PRO THR LYS ILE MET GLU SER GLU GLY ILE ILE GLY SEQRES 20 A 248 GLY SEQRES 1 B 248 MET GLY SER ILE THR GLU ASN THR SER TRP ASN LYS GLU SEQRES 2 B 248 PHE SER ALA GLU ALA VAL ASN GLY VAL PHE VAL LEU CYS SEQRES 3 B 248 LYS SER SER SER LYS SER CYS ALA THR ASN ASP LEU ALA SEQRES 4 B 248 ARG ALA SER LYS GLU TYR LEU PRO ALA SER THR PHE LYS SEQRES 5 B 248 ILE PRO ASN ALA ILE ILE GLY LEU GLU THR GLY VAL ILE SEQRES 6 B 248 LYS ASN GLU HIS GLN VAL PHE LYS TRP ASP GLY LYS PRO SEQRES 7 B 248 ARG ALA MET LYS GLN TRP GLU ARG ASP LEU THR LEU ARG SEQRES 8 B 248 GLY ALA ILE GLN VAL SER ALA VAL PRO VAL PHE GLN GLN SEQRES 9 B 248 ILE ALA ARG GLU VAL GLY GLU VAL ARG MET GLN LYS TYR SEQRES 10 B 248 LEU LYS LYS PHE SER TYR GLY ASN GLN ASN ILE SER GLY SEQRES 11 B 248 GLY ILE ASP LYS PHE ALA LEU GLU GLY GLN LEU ARG ILE SEQRES 12 B 248 SER ALA VAL ASN GLN VAL GLU PHE LEU GLU SER LEU TYR SEQRES 13 B 248 LEU ASN LYS LEU SER ALA SER LYS GLU ASN GLN LEU ILE SEQRES 14 B 248 VAL LYS GLU ALA LEU VAL THR GLU ALA ALA PRO GLU TYR SEQRES 15 B 248 LEU VAL HIS SER LYS THR GLY PHE SER GLY VAL GLY THR SEQRES 16 B 248 GLU SER ASN PRO GLY VAL ALA TRP TRP VAL GLY TRP VAL SEQRES 17 B 248 GLU LYS GLU THR GLU VAL TYR PHE PHE ALA PHE ASN MET SEQRES 18 B 248 ASP ILE ASP ASN GLU SER LYS LEU PRO LEU ARG LYS SER SEQRES 19 B 248 ILE PRO THR LYS ILE MET GLU SER GLU GLY ILE ILE GLY SEQRES 20 B 248 GLY HET SO4 A 401 5 HET SO4 A 404 5 HET SO4 B 402 5 HET SO4 B 403 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 HOH *240(H2 O) HELIX 1 1 THR A 26 TRP A 28 5 3 HELIX 2 2 ASN A 29 ALA A 34 1 6 HELIX 3 3 ASP A 55 SER A 60 1 6 HELIX 4 4 PRO A 65 THR A 68 5 4 HELIX 5 5 PHE A 69 THR A 80 1 12 HELIX 6 6 MET A 99 GLU A 103 5 5 HELIX 7 7 THR A 107 VAL A 114 1 8 HELIX 8 8 ALA A 116 PHE A 139 1 24 HELIX 9 9 SER A 162 LEU A 175 1 14 HELIX 10 10 SER A 181 LEU A 192 1 12 HELIX 11 11 ASN A 243 LEU A 247 5 5 HELIX 12 12 PRO A 248 GLU A 261 1 14 HELIX 13 13 TRP B 28 GLU B 35 1 8 HELIX 14 14 ASP B 55 LYS B 61 1 7 HELIX 15 15 PRO B 65 THR B 68 5 4 HELIX 16 16 PHE B 69 THR B 80 1 12 HELIX 17 17 THR B 107 VAL B 114 1 8 HELIX 18 18 ALA B 116 SER B 140 1 25 HELIX 19 19 ALA B 163 LEU B 175 1 13 HELIX 20 20 SER B 181 LEU B 192 1 12 HELIX 21 21 ASN B 243 LEU B 247 5 5 HELIX 22 22 PRO B 248 GLU B 261 1 14 SHEET 1 A 7 ILE A 22 GLU A 24 0 SHEET 2 A 7 CYS A 51 THR A 53 1 O CYS A 51 N THR A 23 SHEET 3 A 7 GLY A 39 LYS A 45 -1 N LEU A 43 O ALA A 52 SHEET 4 A 7 GLU A 231 ILE A 241 -1 O ASN A 238 N VAL A 40 SHEET 5 A 7 GLY A 218 LYS A 228 -1 N GLY A 224 O PHE A 235 SHEET 6 A 7 TYR A 200 PHE A 208 -1 N GLY A 207 O TRP A 221 SHEET 7 A 7 VAL A 193 ALA A 196 -1 N GLU A 195 O VAL A 202 SHEET 1 B 7 SER B 21 GLU B 24 0 SHEET 2 B 7 SER B 50 THR B 53 1 O CYS B 51 N SER B 21 SHEET 3 B 7 GLY B 39 LYS B 45 -1 N LEU B 43 O ALA B 52 SHEET 4 B 7 GLU B 231 ILE B 241 -1 O PHE B 234 N CYS B 44 SHEET 5 B 7 GLY B 218 LYS B 228 -1 N VAL B 226 O TYR B 233 SHEET 6 B 7 TYR B 200 PHE B 208 -1 N GLY B 207 O TRP B 221 SHEET 7 B 7 VAL B 193 ALA B 196 -1 N THR B 194 O VAL B 202 SHEET 1 C 2 GLU B 62 TYR B 63 0 SHEET 2 C 2 ILE B 161 SER B 162 -1 O ILE B 161 N TYR B 63 SSBOND 1 CYS A 44 CYS A 51 1555 1555 2.03 SSBOND 2 CYS B 44 CYS B 51 1555 1555 2.03 SITE 1 AC1 8 SER A 67 SER A 115 THR A 206 GLY A 207 SITE 2 AC1 8 PHE A 208 ARG A 250 HOH A 406 HOH A 465 SITE 1 AC2 7 SER B 67 SER B 115 THR B 206 GLY B 207 SITE 2 AC2 7 PHE B 208 ARG B 250 HOH B 421 SITE 1 AC3 6 THR B 80 ARG B 131 LYS B 134 TYR B 135 SITE 2 AC3 6 LYS B 256 HOH B 483 SITE 1 AC4 3 LYS A 134 LYS A 138 LYS A 152 CRYST1 48.330 94.430 125.290 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020691 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010590 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007981 0.00000 MASTER 381 0 4 22 16 0 7 6 0 0 0 40 END