HEADER STRUCTURAL GENOMICS, STRUCTURAL PROTEIN 21-JUN-06 2HEH TITLE CRYSTAL STRUCTURE OF THE KIF2C MOTOR DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: KIF2C PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: KINESIN-LIKE 6, MITOTIC CENTROMERE-ASSOCIATED KINESIN, COMPND 5 KINESIN FAMILY MEMBER 2C; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KIF2C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS (DE-3)-RIL; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: P28A-LIC KEYWDS KINESIN, MOTOR DOMAIN, ADP, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.WANG,Y.SHEN,W.TEMPEL,R.LANDRY,C.H.ARROWSMITH,A.M.EDWARDS, AUTHOR 2 M.SUNDSTROM,J.WEIGELT,A.BOCHKAREV,H.PARK,STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (SGC) REVDAT 3 18-OCT-17 2HEH 1 TITLE REMARK REVDAT 2 24-FEB-09 2HEH 1 VERSN REVDAT 1 18-JUL-06 2HEH 0 JRNL AUTH J.WANG,Y.SHEN,W.TEMPEL,R.LANDRY,C.H.ARROWSMITH,A.M.EDWARDS, JRNL AUTH 2 M.SUNDSTROM,J.WEIGELT,A.BOCHKAREV,H.PARK JRNL TITL CRYSTAL STRUCTURE OF THE KIF2C MOTOR DOMAIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 27850 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.955 REMARK 3 FREE R VALUE TEST SET COUNT : 1380 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.21 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1891 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.81 REMARK 3 BIN R VALUE (WORKING SET) : 0.2880 REMARK 3 BIN FREE R VALUE SET COUNT : 101 REMARK 3 BIN FREE R VALUE : 0.3640 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2479 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 38 REMARK 3 SOLVENT ATOMS : 47 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01200 REMARK 3 B22 (A**2) : -0.01200 REMARK 3 B33 (A**2) : 0.02300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.192 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.173 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.121 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.544 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2567 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1736 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3472 ; 1.368 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4243 ; 1.359 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 328 ; 6.129 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 102 ;32.613 ;23.627 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 449 ;14.870 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;17.716 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 402 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2822 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 523 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 459 ; 0.193 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1736 ; 0.206 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1204 ; 0.174 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1403 ; 0.079 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 87 ; 0.116 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.021 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.195 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 29 ; 0.231 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.103 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1697 ; 2.858 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 661 ; 0.484 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2600 ; 4.082 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1016 ; 2.783 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 868 ; 3.905 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2HEH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JUN-06. REMARK 100 THE DEPOSITION ID IS D_1000038254. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51791 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.71300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1V8K REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 37% PEG400, 0.2M NACL, 0.1M HEPES, PH REMARK 280 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K, PH 7.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.44250 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 39.86000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 39.86000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 116.16375 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 39.86000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 39.86000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 38.72125 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 39.86000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 39.86000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 116.16375 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 39.86000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 39.86000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 38.72125 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 77.44250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 1 CHAIN(S). THE BIOLOGICAL UNIT IS REMARK 300 UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 207 REMARK 465 GLY A 208 REMARK 465 SER A 209 REMARK 465 SER A 210 REMARK 465 HIS A 211 REMARK 465 HIS A 212 REMARK 465 HIS A 213 REMARK 465 HIS A 214 REMARK 465 HIS A 215 REMARK 465 HIS A 216 REMARK 465 SER A 217 REMARK 465 SER A 218 REMARK 465 GLY A 219 REMARK 465 LEU A 220 REMARK 465 VAL A 221 REMARK 465 PRO A 222 REMARK 465 ARG A 223 REMARK 465 GLY A 224 REMARK 465 SER A 225 REMARK 465 SER A 226 REMARK 465 PHE A 227 REMARK 465 PRO A 228 REMARK 465 GLY A 360 REMARK 465 ASP A 361 REMARK 465 LEU A 362 REMARK 465 SER A 363 REMARK 465 GLY A 364 REMARK 465 LYS A 365 REMARK 465 ALA A 366 REMARK 465 GLN A 367 REMARK 465 ASN A 368 REMARK 465 ALA A 369 REMARK 465 SER A 370 REMARK 465 THR A 457 REMARK 465 SER A 458 REMARK 465 GLY A 459 REMARK 465 GLN A 460 REMARK 465 THR A 461 REMARK 465 PHE A 462 REMARK 465 ALA A 463 REMARK 465 ASN A 464 REMARK 465 SER A 465 REMARK 465 ARG A 498 REMARK 465 GLY A 499 REMARK 465 ALA A 500 REMARK 465 ASP A 501 REMARK 465 THR A 502 REMARK 465 SER A 503 REMARK 465 SER A 504 REMARK 465 ALA A 505 REMARK 465 ASP A 506 REMARK 465 ARG A 507 REMARK 465 GLN A 508 REMARK 465 THR A 509 REMARK 465 ARG A 510 REMARK 465 MET A 511 REMARK 465 GLU A 512 REMARK 465 LEU A 588 REMARK 465 SER A 589 REMARK 465 PRO A 590 REMARK 465 HIS A 591 REMARK 465 SER A 592 REMARK 465 GLY A 593 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 238 CD OE1 OE2 REMARK 470 LYS A 270 CD CE NZ REMARK 470 GLN A 271 CD OE1 NE2 REMARK 470 LYS A 276 CD CE NZ REMARK 470 GLN A 334 CD OE1 NE2 REMARK 470 LYS A 371 CE NZ REMARK 470 ASN A 386 OD1 ND2 REMARK 470 GLN A 387 OE1 NE2 REMARK 470 ARG A 391 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 392 CG CD CE NZ REMARK 470 LEU A 393 CD1 CD2 REMARK 470 GLU A 396 CD OE1 OE2 REMARK 470 LYS A 415 CG CD CE NZ REMARK 470 LYS A 418 CD CE NZ REMARK 470 ARG A 420 CD NE CZ NH1 NH2 REMARK 470 LYS A 426 CE NZ REMARK 470 LYS A 447 CD CE NZ REMARK 470 ASN A 466 CG OD1 ND2 REMARK 470 ARG A 469 CD NE CZ NH1 NH2 REMARK 470 LYS A 481 CD CE NZ REMARK 470 ARG A 483 CD NE CZ NH1 NH2 REMARK 470 GLU A 515 CG CD OE1 OE2 REMARK 470 GLN A 532 CD OE1 NE2 REMARK 470 GLU A 555 CG CD OE1 OE2 REMARK 470 GLU A 573 CG CD OE1 OE2 REMARK 470 ARG A 584 NE CZ NH1 NH2 REMARK 470 GLU A 587 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 550 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 328 -84.50 -117.01 REMARK 500 LYS A 481 42.70 -144.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 706 O REMARK 620 2 HOH A 707 O 92.2 REMARK 620 3 ADP A 601 O2B 94.3 94.2 REMARK 620 4 THR A 355 OG1 87.1 177.1 88.6 REMARK 620 5 HOH A 704 O 95.1 88.5 170.1 88.8 REMARK 620 6 HOH A 705 O 174.1 93.4 87.1 87.2 83.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 805 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 806 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 807 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 808 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 809 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 810 DBREF 2HEH A 225 593 UNP Q99661 KIF2C_HUMAN 225 593 SEQADV 2HEH MET A 207 UNP Q99661 CLONING ARTIFACT SEQADV 2HEH GLY A 208 UNP Q99661 CLONING ARTIFACT SEQADV 2HEH SER A 209 UNP Q99661 CLONING ARTIFACT SEQADV 2HEH SER A 210 UNP Q99661 CLONING ARTIFACT SEQADV 2HEH HIS A 211 UNP Q99661 EXPRESSION TAG SEQADV 2HEH HIS A 212 UNP Q99661 EXPRESSION TAG SEQADV 2HEH HIS A 213 UNP Q99661 EXPRESSION TAG SEQADV 2HEH HIS A 214 UNP Q99661 EXPRESSION TAG SEQADV 2HEH HIS A 215 UNP Q99661 EXPRESSION TAG SEQADV 2HEH HIS A 216 UNP Q99661 EXPRESSION TAG SEQADV 2HEH SER A 217 UNP Q99661 CLONING ARTIFACT SEQADV 2HEH SER A 218 UNP Q99661 CLONING ARTIFACT SEQADV 2HEH GLY A 219 UNP Q99661 CLONING ARTIFACT SEQADV 2HEH LEU A 220 UNP Q99661 CLONING ARTIFACT SEQADV 2HEH VAL A 221 UNP Q99661 CLONING ARTIFACT SEQADV 2HEH PRO A 222 UNP Q99661 CLONING ARTIFACT SEQADV 2HEH ARG A 223 UNP Q99661 CLONING ARTIFACT SEQADV 2HEH GLY A 224 UNP Q99661 CLONING ARTIFACT SEQRES 1 A 387 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 387 LEU VAL PRO ARG GLY SER SER PHE PRO ASN TRP GLU PHE SEQRES 3 A 387 ALA ARG MET ILE LYS GLU PHE ARG ALA THR LEU GLU CYS SEQRES 4 A 387 HIS PRO LEU THR MET THR ASP PRO ILE GLU GLU HIS ARG SEQRES 5 A 387 ILE CYS VAL CYS VAL ARG LYS ARG PRO LEU ASN LYS GLN SEQRES 6 A 387 GLU LEU ALA LYS LYS GLU ILE ASP VAL ILE SER ILE PRO SEQRES 7 A 387 SER LYS CYS LEU LEU LEU VAL HIS GLU PRO LYS LEU LYS SEQRES 8 A 387 VAL ASP LEU THR LYS TYR LEU GLU ASN GLN ALA PHE CYS SEQRES 9 A 387 PHE ASP PHE ALA PHE ASP GLU THR ALA SER ASN GLU VAL SEQRES 10 A 387 VAL TYR ARG PHE THR ALA ARG PRO LEU VAL GLN THR ILE SEQRES 11 A 387 PHE GLU GLY GLY LYS ALA THR CYS PHE ALA TYR GLY GLN SEQRES 12 A 387 THR GLY SER GLY LYS THR HIS THR MET GLY GLY ASP LEU SEQRES 13 A 387 SER GLY LYS ALA GLN ASN ALA SER LYS GLY ILE TYR ALA SEQRES 14 A 387 MET ALA SER ARG ASP VAL PHE LEU LEU LYS ASN GLN PRO SEQRES 15 A 387 CYS TYR ARG LYS LEU GLY LEU GLU VAL TYR VAL THR PHE SEQRES 16 A 387 PHE GLU ILE TYR ASN GLY LYS LEU PHE ASP LEU LEU ASN SEQRES 17 A 387 LYS LYS ALA LYS LEU ARG VAL LEU GLU ASP GLY LYS GLN SEQRES 18 A 387 GLN VAL GLN VAL VAL GLY LEU GLN GLU HIS LEU VAL ASN SEQRES 19 A 387 SER ALA ASP ASP VAL ILE LYS MET ILE ASP MET GLY SER SEQRES 20 A 387 ALA CYS ARG THR SER GLY GLN THR PHE ALA ASN SER ASN SEQRES 21 A 387 SER SER ARG SER HIS ALA CYS PHE GLN ILE ILE LEU ARG SEQRES 22 A 387 ALA LYS GLY ARG MET HIS GLY LYS PHE SER LEU VAL ASP SEQRES 23 A 387 LEU ALA GLY ASN GLU ARG GLY ALA ASP THR SER SER ALA SEQRES 24 A 387 ASP ARG GLN THR ARG MET GLU GLY ALA GLU ILE ASN LYS SEQRES 25 A 387 SER LEU LEU ALA LEU LYS GLU CYS ILE ARG ALA LEU GLY SEQRES 26 A 387 GLN ASN LYS ALA HIS THR PRO PHE ARG GLU SER LYS LEU SEQRES 27 A 387 THR GLN VAL LEU ARG ASP SER PHE ILE GLY GLU ASN SER SEQRES 28 A 387 ARG THR CYS MET ILE ALA THR ILE SER PRO GLY ILE SER SEQRES 29 A 387 SER CYS GLU TYR THR LEU ASN THR LEU ARG TYR ALA ASP SEQRES 30 A 387 ARG VAL LYS GLU LEU SER PRO HIS SER GLY HET MG A 602 1 HET ADP A 601 27 HET UNX A 801 1 HET UNX A 802 1 HET UNX A 803 1 HET UNX A 804 1 HET UNX A 805 1 HET UNX A 806 1 HET UNX A 807 1 HET UNX A 808 1 HET UNX A 809 1 HET UNX A 810 1 HETNAM MG MAGNESIUM ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM UNX UNKNOWN ATOM OR ION FORMUL 2 MG MG 2+ FORMUL 3 ADP C10 H15 N5 O10 P2 FORMUL 4 UNX 10(X) FORMUL 14 HOH *47(H2 O) HELIX 1 1 ASN A 229 LEU A 243 1 15 HELIX 2 2 ASN A 269 LYS A 275 1 7 HELIX 3 3 SER A 320 THR A 328 1 9 HELIX 4 4 ALA A 329 GLU A 338 1 10 HELIX 5 5 GLY A 353 GLY A 359 1 7 HELIX 6 6 GLY A 372 ASN A 386 1 15 HELIX 7 7 GLN A 387 LYS A 392 1 6 HELIX 8 8 SER A 441 ARG A 456 1 16 HELIX 9 9 ASN A 466 SER A 470 5 5 HELIX 10 10 GLY A 513 GLN A 532 1 20 HELIX 11 11 PRO A 538 GLU A 541 5 4 HELIX 12 12 SER A 542 LEU A 548 1 7 HELIX 13 13 ARG A 549 ILE A 553 5 5 HELIX 14 14 GLY A 568 SER A 570 5 3 HELIX 15 15 SER A 571 LYS A 586 1 16 SHEET 1 A 9 PHE A 313 PHE A 315 0 SHEET 2 A 9 ILE A 259 LYS A 265 1 N VAL A 263 O PHE A 315 SHEET 3 A 9 SER A 557 ILE A 565 1 O ALA A 563 N CYS A 262 SHEET 4 A 9 LYS A 341 TYR A 347 1 N PHE A 345 O ILE A 562 SHEET 5 A 9 MET A 484 ASP A 492 1 O VAL A 491 N CYS A 344 SHEET 6 A 9 HIS A 471 ARG A 479 -1 N LEU A 478 O HIS A 485 SHEET 7 A 9 GLU A 396 TYR A 405 -1 N PHE A 402 O CYS A 473 SHEET 8 A 9 LYS A 408 ASP A 411 -1 O PHE A 410 N GLU A 403 SHEET 9 A 9 ALA A 417 LYS A 418 -1 O ALA A 417 N ASP A 411 SHEET 1 B 8 PHE A 313 PHE A 315 0 SHEET 2 B 8 ILE A 259 LYS A 265 1 N VAL A 263 O PHE A 315 SHEET 3 B 8 SER A 557 ILE A 565 1 O ALA A 563 N CYS A 262 SHEET 4 B 8 LYS A 341 TYR A 347 1 N PHE A 345 O ILE A 562 SHEET 5 B 8 MET A 484 ASP A 492 1 O VAL A 491 N CYS A 344 SHEET 6 B 8 HIS A 471 ARG A 479 -1 N LEU A 478 O HIS A 485 SHEET 7 B 8 GLU A 396 TYR A 405 -1 N PHE A 402 O CYS A 473 SHEET 8 B 8 HIS A 437 VAL A 439 -1 O HIS A 437 N VAL A 399 SHEET 1 C 3 ILE A 281 SER A 282 0 SHEET 2 C 3 LEU A 288 LEU A 296 -1 O LEU A 290 N SER A 282 SHEET 3 C 3 LYS A 302 CYS A 310 -1 O GLU A 305 N GLU A 293 SHEET 1 D 2 ARG A 420 GLU A 423 0 SHEET 2 D 2 VAL A 429 VAL A 432 -1 O VAL A 432 N ARG A 420 SSBOND 1 CYS A 344 CYS A 560 1555 1555 2.56 LINK MG MG A 602 O HOH A 706 1555 1555 2.04 LINK MG MG A 602 O HOH A 707 1555 1555 2.07 LINK MG MG A 602 O2B ADP A 601 1555 1555 2.16 LINK MG MG A 602 OG1 THR A 355 1555 1555 1.97 LINK MG MG A 602 O HOH A 704 1555 1555 2.06 LINK MG MG A 602 O HOH A 705 1555 1555 2.04 SITE 1 AC1 6 THR A 355 ADP A 601 HOH A 704 HOH A 705 SITE 2 AC1 6 HOH A 706 HOH A 707 SITE 1 AC2 18 ARG A 264 ARG A 266 PRO A 267 GLN A 349 SITE 2 AC2 18 THR A 350 GLY A 351 SER A 352 GLY A 353 SITE 3 AC2 18 LYS A 354 THR A 355 HIS A 356 MG A 602 SITE 4 AC2 18 HOH A 705 HOH A 706 HOH A 707 HOH A 718 SITE 5 AC2 18 HOH A 719 HOH A 733 SITE 1 AC3 2 VAL A 421 LYS A 543 SITE 1 AC4 4 ILE A 404 SER A 519 LYS A 543 LEU A 544 SITE 1 AC5 1 LYS A 297 SITE 1 AC6 4 GLU A 305 ASN A 306 GLN A 307 ARG A 580 SITE 1 AC7 3 GLU A 436 MET A 484 LYS A 487 SITE 1 AC8 1 ASP A 424 SITE 1 AC9 1 ILE A 259 SITE 1 BC1 5 MET A 358 GLY A 359 GLY A 372 TYR A 374 SITE 2 BC1 5 ALA A 375 SITE 1 BC2 1 LEU A 384 SITE 1 BC3 6 GLN A 427 HIS A 536 THR A 537 PHE A 539 SITE 2 BC3 6 ARG A 549 HOH A 709 CRYST1 79.720 79.720 154.885 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012540 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012540 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006460 0.00000 MASTER 453 0 12 15 22 0 19 6 0 0 0 30 END