HEADER TRANSFERASE 08-JUN-06 2H92 TITLE CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS CYTIDINE TITLE 2 MONOPHOSPHATE KINASE IN COMPLEX WITH CYTIDINE-5'- TITLE 3 MONOPHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTIDYLATE KINASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: CYTIDINE MONOPHOSPHATE KINASE; COMPND 5 EC: 2.7.4.14; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: CMK; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS ROSSMANN FOLD, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR B.DHALIWAL REVDAT 2 24-FEB-09 2H92 1 VERSN REVDAT 1 08-AUG-06 2H92 0 JRNL AUTH B.DHALIWAL,J.REN,M.LOCKYER,I.CHARLES,A.R.HAWKINS, JRNL AUTH 2 D.K.STAMMERS JRNL TITL STRUCTURE OF STAPHYLOCOCCUS AUREUS CYTIDINE JRNL TITL 2 MONOPHOSPHATE KINASE IN COMPLEX WITH CYTIDINE JRNL TITL 3 5'-MONOPHOSPHATE. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 62 710 2006 JRNL REFN ESSN 1744-3091 JRNL PMID 16880539 JRNL DOI 10.1107/S174430910602447X REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 48267 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2420 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5088 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 90 REMARK 3 SOLVENT ATOMS : 334 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.27 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : C.PAR REMARK 3 PARAMETER FILE 5 : PEG2.PAR REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2H92 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JUN-06. REMARK 100 THE RCSB ID CODE IS RCSB038082. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-AUG-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9340 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : ADSC, DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48287 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1KDO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M AMMONIUM SULFATE, 0.1M HEPES, REMARK 280 2% PEG 200, PH 7.8, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 25.41000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 50.82000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 25.41000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 50.82000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 LYS A 219 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 LYS B 219 REMARK 465 MET C 1 REMARK 465 LYS C 2 REMARK 465 LYS C 219 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 C1 PG4 B 1001 C1 PG4 B 1001 4675 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 16 -64.18 -22.03 REMARK 500 LEU A 48 30.69 -88.10 REMARK 500 GLN A 60 32.88 -92.84 REMARK 500 LYS A 119 -168.98 57.39 REMARK 500 LEU A 133 66.64 -119.94 REMARK 500 ARG A 160 -3.16 -57.33 REMARK 500 SER A 186 56.33 35.50 REMARK 500 LYS B 16 -61.96 -24.97 REMARK 500 LEU B 48 30.47 -88.99 REMARK 500 GLN B 60 37.93 -96.19 REMARK 500 LYS B 68 -165.06 -77.36 REMARK 500 LYS B 119 -168.54 58.70 REMARK 500 ARG B 160 0.66 -59.64 REMARK 500 SER B 186 56.13 37.03 REMARK 500 LYS C 16 -68.24 -19.72 REMARK 500 LEU C 48 31.68 -88.73 REMARK 500 GLN C 60 36.13 -96.24 REMARK 500 LYS C 119 -167.38 57.65 REMARK 500 ARG C 160 5.47 -65.34 REMARK 500 SER C 186 55.51 37.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1465 DISTANCE = 6.47 ANGSTROMS REMARK 525 HOH B1479 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH B1516 DISTANCE = 5.51 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PG4 B 1001 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1400 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1401 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 1402 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C5P A 1300 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C5P B 1301 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C5P C 1302 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 B 1001 DBREF 2H92 A 1 219 UNP Q1YBX2 Q1YBX2_STAAU 1 219 DBREF 2H92 B 1 219 UNP Q1YBX2 Q1YBX2_STAAU 1 219 DBREF 2H92 C 1 219 UNP Q1YBX2 Q1YBX2_STAAU 1 219 SEQRES 1 A 219 MET LYS ALA ILE ASN ILE ALA LEU ASP GLY PRO ALA ALA SEQRES 2 A 219 ALA GLY LYS SER THR ILE ALA LYS ARG VAL ALA SER GLU SEQRES 3 A 219 LEU SER MET ILE TYR VAL ASP THR GLY ALA MET TYR ARG SEQRES 4 A 219 ALA LEU THR TYR LYS TYR LEU LYS LEU ASN LYS THR GLU SEQRES 5 A 219 ASP PHE ALA LYS LEU VAL ASP GLN THR THR LEU ASP LEU SEQRES 6 A 219 THR TYR LYS ALA ASP LYS GLY GLN CYS VAL ILE LEU ASP SEQRES 7 A 219 ASN GLU ASP VAL THR ASP PHE LEU ARG ASN ASN ASP VAL SEQRES 8 A 219 THR GLN HIS VAL SER TYR VAL ALA SER LYS GLU PRO VAL SEQRES 9 A 219 ARG SER PHE ALA VAL LYS LYS GLN LYS GLU LEU ALA ALA SEQRES 10 A 219 GLU LYS GLY ILE VAL MET ASP GLY ARG ASP ILE GLY THR SEQRES 11 A 219 VAL VAL LEU PRO ASP ALA ASP LEU LYS VAL TYR MET ILE SEQRES 12 A 219 ALA SER VAL GLU GLU ARG ALA GLU ARG ARG TYR LYS ASP SEQRES 13 A 219 ASN GLN LEU ARG GLY ILE GLU SER ASN PHE GLU ASP LEU SEQRES 14 A 219 LYS ARG ASP ILE GLU ALA ARG ASP GLN TYR ASP MET ASN SEQRES 15 A 219 ARG GLU ILE SER PRO LEU ARG LYS ALA ASP ASP ALA VAL SEQRES 16 A 219 THR LEU ASP THR THR GLY LYS SER ILE GLU GLU VAL THR SEQRES 17 A 219 ASP GLU ILE LEU ALA MET VAL SER GLN ILE LYS SEQRES 1 B 219 MET LYS ALA ILE ASN ILE ALA LEU ASP GLY PRO ALA ALA SEQRES 2 B 219 ALA GLY LYS SER THR ILE ALA LYS ARG VAL ALA SER GLU SEQRES 3 B 219 LEU SER MET ILE TYR VAL ASP THR GLY ALA MET TYR ARG SEQRES 4 B 219 ALA LEU THR TYR LYS TYR LEU LYS LEU ASN LYS THR GLU SEQRES 5 B 219 ASP PHE ALA LYS LEU VAL ASP GLN THR THR LEU ASP LEU SEQRES 6 B 219 THR TYR LYS ALA ASP LYS GLY GLN CYS VAL ILE LEU ASP SEQRES 7 B 219 ASN GLU ASP VAL THR ASP PHE LEU ARG ASN ASN ASP VAL SEQRES 8 B 219 THR GLN HIS VAL SER TYR VAL ALA SER LYS GLU PRO VAL SEQRES 9 B 219 ARG SER PHE ALA VAL LYS LYS GLN LYS GLU LEU ALA ALA SEQRES 10 B 219 GLU LYS GLY ILE VAL MET ASP GLY ARG ASP ILE GLY THR SEQRES 11 B 219 VAL VAL LEU PRO ASP ALA ASP LEU LYS VAL TYR MET ILE SEQRES 12 B 219 ALA SER VAL GLU GLU ARG ALA GLU ARG ARG TYR LYS ASP SEQRES 13 B 219 ASN GLN LEU ARG GLY ILE GLU SER ASN PHE GLU ASP LEU SEQRES 14 B 219 LYS ARG ASP ILE GLU ALA ARG ASP GLN TYR ASP MET ASN SEQRES 15 B 219 ARG GLU ILE SER PRO LEU ARG LYS ALA ASP ASP ALA VAL SEQRES 16 B 219 THR LEU ASP THR THR GLY LYS SER ILE GLU GLU VAL THR SEQRES 17 B 219 ASP GLU ILE LEU ALA MET VAL SER GLN ILE LYS SEQRES 1 C 219 MET LYS ALA ILE ASN ILE ALA LEU ASP GLY PRO ALA ALA SEQRES 2 C 219 ALA GLY LYS SER THR ILE ALA LYS ARG VAL ALA SER GLU SEQRES 3 C 219 LEU SER MET ILE TYR VAL ASP THR GLY ALA MET TYR ARG SEQRES 4 C 219 ALA LEU THR TYR LYS TYR LEU LYS LEU ASN LYS THR GLU SEQRES 5 C 219 ASP PHE ALA LYS LEU VAL ASP GLN THR THR LEU ASP LEU SEQRES 6 C 219 THR TYR LYS ALA ASP LYS GLY GLN CYS VAL ILE LEU ASP SEQRES 7 C 219 ASN GLU ASP VAL THR ASP PHE LEU ARG ASN ASN ASP VAL SEQRES 8 C 219 THR GLN HIS VAL SER TYR VAL ALA SER LYS GLU PRO VAL SEQRES 9 C 219 ARG SER PHE ALA VAL LYS LYS GLN LYS GLU LEU ALA ALA SEQRES 10 C 219 GLU LYS GLY ILE VAL MET ASP GLY ARG ASP ILE GLY THR SEQRES 11 C 219 VAL VAL LEU PRO ASP ALA ASP LEU LYS VAL TYR MET ILE SEQRES 12 C 219 ALA SER VAL GLU GLU ARG ALA GLU ARG ARG TYR LYS ASP SEQRES 13 C 219 ASN GLN LEU ARG GLY ILE GLU SER ASN PHE GLU ASP LEU SEQRES 14 C 219 LYS ARG ASP ILE GLU ALA ARG ASP GLN TYR ASP MET ASN SEQRES 15 C 219 ARG GLU ILE SER PRO LEU ARG LYS ALA ASP ASP ALA VAL SEQRES 16 C 219 THR LEU ASP THR THR GLY LYS SER ILE GLU GLU VAL THR SEQRES 17 C 219 ASP GLU ILE LEU ALA MET VAL SER GLN ILE LYS HET SO4 A1400 5 HET SO4 B1401 5 HET SO4 C1402 5 HET C5P A1300 21 HET C5P B1301 21 HET C5P C1302 21 HET PG4 B1001 12 HETNAM SO4 SULFATE ION HETNAM C5P CYTIDINE-5'-MONOPHOSPHATE HETNAM PG4 TETRAETHYLENE GLYCOL FORMUL 4 SO4 3(O4 S 2-) FORMUL 7 C5P 3(C9 H14 N3 O8 P) FORMUL 10 PG4 C8 H18 O5 FORMUL 11 HOH *334(H2 O) HELIX 1 1 GLY A 15 LEU A 27 1 13 HELIX 2 2 THR A 34 LEU A 48 1 15 HELIX 3 3 ASP A 53 GLN A 60 1 8 HELIX 4 4 THR A 83 LEU A 86 5 4 HELIX 5 5 ASN A 89 SER A 100 1 12 HELIX 6 6 LYS A 101 ALA A 117 1 17 HELIX 7 7 SER A 145 ARG A 160 1 16 HELIX 8 8 ASN A 165 ARG A 183 1 19 HELIX 9 9 SER A 203 GLN A 217 1 15 HELIX 10 10 GLY B 15 LEU B 27 1 13 HELIX 11 11 THR B 34 LEU B 48 1 15 HELIX 12 12 ASP B 53 GLN B 60 1 8 HELIX 13 13 THR B 83 LEU B 86 5 4 HELIX 14 14 ASN B 89 SER B 100 1 12 HELIX 15 15 LYS B 101 ALA B 117 1 17 HELIX 16 16 SER B 145 ARG B 160 1 16 HELIX 17 17 ASN B 165 ARG B 183 1 19 HELIX 18 18 SER B 203 GLN B 217 1 15 HELIX 19 19 GLY C 15 LEU C 27 1 13 HELIX 20 20 THR C 34 LEU C 48 1 15 HELIX 21 21 ASP C 53 GLN C 60 1 8 HELIX 22 22 THR C 83 LEU C 86 5 4 HELIX 23 23 ASN C 89 SER C 100 1 12 HELIX 24 24 LYS C 101 ALA C 117 1 17 HELIX 25 25 SER C 145 ARG C 160 1 16 HELIX 26 26 ASN C 165 ARG C 183 1 19 HELIX 27 27 SER C 203 GLN C 217 1 15 SHEET 1 A 5 ILE A 30 ASP A 33 0 SHEET 2 A 5 ILE A 121 GLY A 125 1 O VAL A 122 N ILE A 30 SHEET 3 A 5 ILE A 6 ASP A 9 1 N LEU A 8 O MET A 123 SHEET 4 A 5 LEU A 138 ILE A 143 1 O VAL A 140 N ALA A 7 SHEET 5 A 5 VAL A 195 ASP A 198 1 O VAL A 195 N TYR A 141 SHEET 1 B 3 LEU A 63 TYR A 67 0 SHEET 2 B 3 GLN A 73 LEU A 77 -1 O CYS A 74 N THR A 66 SHEET 3 B 3 GLU A 80 ASP A 81 -1 O GLU A 80 N LEU A 77 SHEET 1 C 5 ILE B 30 ASP B 33 0 SHEET 2 C 5 ILE B 121 GLY B 125 1 O VAL B 122 N ILE B 30 SHEET 3 C 5 ILE B 6 ASP B 9 1 N LEU B 8 O MET B 123 SHEET 4 C 5 LEU B 138 ILE B 143 1 O VAL B 140 N ALA B 7 SHEET 5 C 5 VAL B 195 ASP B 198 1 O VAL B 195 N TYR B 141 SHEET 1 D 3 LEU B 63 TYR B 67 0 SHEET 2 D 3 GLN B 73 LEU B 77 -1 O CYS B 74 N THR B 66 SHEET 3 D 3 GLU B 80 ASP B 81 -1 O GLU B 80 N LEU B 77 SHEET 1 E 5 ILE C 30 ASP C 33 0 SHEET 2 E 5 ILE C 121 GLY C 125 1 O VAL C 122 N ILE C 30 SHEET 3 E 5 ILE C 6 ASP C 9 1 N LEU C 8 O MET C 123 SHEET 4 E 5 LEU C 138 ILE C 143 1 O LEU C 138 N ALA C 7 SHEET 5 E 5 VAL C 195 ASP C 198 1 O VAL C 195 N TYR C 141 SHEET 1 F 3 LEU C 63 TYR C 67 0 SHEET 2 F 3 GLN C 73 LEU C 77 -1 O CYS C 74 N THR C 66 SHEET 3 F 3 GLU C 80 ASP C 81 -1 O GLU C 80 N LEU C 77 SITE 1 AC1 6 ALA A 13 ALA A 14 GLY A 15 LYS A 16 SITE 2 AC1 6 SER A 17 HOH A1478 SITE 1 AC2 8 ALA B 13 ALA B 14 GLY B 15 LYS B 16 SITE 2 AC2 8 SER B 17 ARG B 153 HOH B1402 HOH B1438 SITE 1 AC3 6 ALA C 13 ALA C 14 GLY C 15 LYS C 16 SITE 2 AC3 6 SER C 17 ARG C 153 SITE 1 AC4 17 THR A 34 GLY A 35 TYR A 38 ARG A 39 SITE 2 AC4 17 VAL A 95 SER A 96 ARG A 105 GLY A 125 SITE 3 AC4 17 ARG A 126 ASP A 127 ILE A 128 ARG A 176 SITE 4 AC4 17 ASP A 180 ARG A 183 HOH A1402 HOH A1404 SITE 5 AC4 17 HOH A1405 SITE 1 AC5 18 THR B 34 GLY B 35 TYR B 38 ARG B 39 SITE 2 AC5 18 VAL B 95 SER B 96 ALA B 99 ARG B 105 SITE 3 AC5 18 GLY B 125 ARG B 126 ASP B 127 ARG B 176 SITE 4 AC5 18 ASP B 180 ARG B 183 HOH B1402 HOH B1406 SITE 5 AC5 18 HOH B1444 HOH B1493 SITE 1 AC6 19 LYS C 16 THR C 34 GLY C 35 TYR C 38 SITE 2 AC6 19 ARG C 39 VAL C 95 SER C 96 ALA C 99 SITE 3 AC6 19 ARG C 105 GLY C 125 ARG C 126 ASP C 127 SITE 4 AC6 19 ARG C 176 ASP C 180 ARG C 183 HOH C1407 SITE 5 AC6 19 HOH C1413 HOH C1426 HOH C1494 SITE 1 AC7 10 MET B 29 ILE B 30 TYR B 67 LYS B 68 SITE 2 AC7 10 ALA B 69 LYS B 71 LYS B 119 GLY B 120 SITE 3 AC7 10 ILE B 121 HOH B1492 CRYST1 157.890 157.890 76.230 90.00 90.00 120.00 P 64 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006334 0.003657 0.000000 0.00000 SCALE2 0.000000 0.007313 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013118 0.00000 MASTER 359 0 7 27 24 0 24 6 0 0 0 51 END