HEADER SURFACE ACTIVE PROTEIN 03-MAY-06 2GVM TITLE CRYSTAL STRUCTURE OF HYDROPHOBIN HFBI WITH DETERGENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYDROPHOBIN-1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: HYDROPHOBIN I, HFBI SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HYPOCREA JECORINA; SOURCE 3 ORGANISM_TAXID: 51453 KEYWDS HYDROPHOBIN, AMPHIPHILE, SURFACTANT, HIGH SOLVENT CONTENT, SURFACE KEYWDS 2 ACTIVE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.M.HAKANPAA,J.ROUVINEN REVDAT 4 13-JUL-11 2GVM 1 VERSN REVDAT 3 24-FEB-09 2GVM 1 VERSN REVDAT 2 12-SEP-06 2GVM 1 JRNL REVDAT 1 15-AUG-06 2GVM 0 JRNL AUTH J.M.HAKANPAA,G.R.SZILVAY,H.KALJUNEN,M.MAKSIMAINEN,M.LINDER, JRNL AUTH 2 J.ROUVINEN JRNL TITL TWO CRYSTAL STRUCTURES OF TRICHODERMA REESEI HYDROPHOBIN JRNL TITL 2 HFBI--THE STRUCTURE OF A PROTEIN AMPHIPHILE WITH AND WITHOUT JRNL TITL 3 DETERGENT INTERACTION. JRNL REF PROTEIN SCI. V. 15 2129 2006 JRNL REFN ISSN 0961-8368 JRNL PMID 16882996 JRNL DOI 10.1110/PS.062326706 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.1 REMARK 3 NUMBER OF REFLECTIONS : 28109 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 1406 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1968 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 162 REMARK 3 SOLVENT ATOMS : 118 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.61100 REMARK 3 B22 (A**2) : 0.58200 REMARK 3 B33 (A**2) : 1.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.493 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.573 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.128 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.282 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 42.29 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR:PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CNS_TOPPAR:ACT.PARAM REMARK 3 PARAMETER FILE 3 : CNS_TOPPAR:WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : CNS_TOPPAR:ION.PARAM REMARK 3 PARAMETER FILE 5 : CNS_TOPPAR:LDA.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : CNS_TOPPAR:PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CNS_TOPPAR:ACT.TOP REMARK 3 TOPOLOGY FILE 3 : CNS_TOPPAR:WATER.TOP REMARK 3 TOPOLOGY FILE 4 : CNS_TOPPAR:ION.TOP REMARK 3 TOPOLOGY FILE 5 : CNS_TOPPAR:LDA.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2GVM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAY-06. REMARK 100 THE RCSB ID CODE IS RCSB037602. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.84230 REMARK 200 MONOCHROMATOR : SI 111, HORIZONTALLY FOCUSSING REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28109 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 20.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.31800 REMARK 200 R SYM FOR SHELL (I) : 0.41900 REMARK 200 FOR SHELL : 4.520 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 2FZ6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 78.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M ZINC ACETATE, 0.1 HEPES (PH 7) REMARK 280 LDAO-DETERGENT AS AN ADDITIVE, CONCENTRATION IN THE DROP 2 MM, PH REMARK 280 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.60000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.60000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 45.95000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.80000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 45.95000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.80000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 60.60000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 45.95000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 60.80000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 60.60000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 45.95000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 60.80000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 4 CHAIN(S). SEE REMARK 350 FOR REMARK 300 INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). REMARK 300 REMARK 300 THE BIOLOGICAL ASSEMBLY IS AN OCTAMER FORMED IN THE REMARK 300 PRESENCE OF DETERGENT BY 8 HFBI-MOLECULES AND 20 REMARK 300 LDAO-MOLECULES. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -91.90000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -60.60000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -155.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, B REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 -45.95000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 60.80000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 60.60000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 -45.95000 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 -60.80000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -60.60000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -146.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 -45.95000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 -60.80000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -45.95000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -60.80000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -60.60000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 -45.95000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 60.80000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 60.60000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 -45.95000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 60.80000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -121.20000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 6 -1.000000 0.000000 0.000000 -91.90000 REMARK 350 BIOMT2 6 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 -60.60000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 7 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 ASN A 2 REMARK 465 GLY A 3 REMARK 465 ASN A 4 REMARK 465 GLY A 5 REMARK 465 SER B 1 REMARK 465 ASN B 2 REMARK 465 GLY B 3 REMARK 465 ASN B 4 REMARK 465 GLY B 5 REMARK 465 SER C 1 REMARK 465 ASN C 2 REMARK 465 GLY C 3 REMARK 465 ASN C 4 REMARK 465 GLY C 5 REMARK 465 SER D 1 REMARK 465 ASN D 2 REMARK 465 GLY D 3 REMARK 465 ASN D 4 REMARK 465 GLY D 5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 43 O HOH A 307 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 C12 LDA B 308 C12 LDA B 308 3454 1.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 21 -175.77 -173.81 REMARK 500 LEU A 24 11.44 55.65 REMARK 500 LEU A 26 -0.09 -148.20 REMARK 500 LEU B 24 12.40 58.07 REMARK 500 LEU B 26 -18.38 -148.23 REMARK 500 ASP B 30 74.81 55.04 REMARK 500 ALA B 63 153.10 -48.34 REMARK 500 LEU C 24 8.16 59.66 REMARK 500 LEU C 26 9.18 -164.20 REMARK 500 LEU D 24 19.72 57.31 REMARK 500 LEU D 26 6.02 -164.94 REMARK 500 ASP D 30 66.94 60.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 332 DISTANCE = 5.28 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 43 OD1 REMARK 620 2 ASP A 43 OD2 57.0 REMARK 620 3 HOH A 305 O 106.0 111.4 REMARK 620 4 ASP D 40 OD1 93.8 81.0 160.1 REMARK 620 5 ASP D 40 OD2 131.8 82.1 112.5 52.1 REMARK 620 6 ASP D 43 OD2 82.7 135.1 97.2 82.9 118.7 REMARK 620 7 ASP D 43 OD1 133.9 162.1 80.9 83.8 81.1 51.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 43 OD1 REMARK 620 2 ASP B 43 OD2 50.6 REMARK 620 3 ASP B 40 OD1 77.4 117.4 REMARK 620 4 HOH B 328 O 78.5 87.5 116.8 REMARK 620 5 ASP C 43 OD1 130.6 83.7 150.6 82.3 REMARK 620 6 ASP C 43 OD2 161.1 120.4 97.0 119.6 53.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA B 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA B 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA B 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA C 310 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FZ6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HYDROPHOBIN HFBI WITHOUT DETERGENT REMARK 900 RELATED ID: 1R2M RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HYDROPHOBIN HFBII REMARK 900 RELATED ID: 2B97 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HYDROPHOBIN HFBII AT ULTRA-HIGH REMARK 900 RESOLUTION DBREF 2GVM A 1 75 UNP P52754 HYP1_TRIRE 23 97 DBREF 2GVM B 1 75 UNP P52754 HYP1_TRIRE 23 97 DBREF 2GVM C 1 75 UNP P52754 HYP1_TRIRE 23 97 DBREF 2GVM D 1 75 UNP P52754 HYP1_TRIRE 23 97 SEQRES 1 A 75 SER ASN GLY ASN GLY ASN VAL CYS PRO PRO GLY LEU PHE SEQRES 2 A 75 SER ASN PRO GLN CYS CYS ALA THR GLN VAL LEU GLY LEU SEQRES 3 A 75 ILE GLY LEU ASP CYS LYS VAL PRO SER GLN ASN VAL TYR SEQRES 4 A 75 ASP GLY THR ASP PHE ARG ASN VAL CYS ALA LYS THR GLY SEQRES 5 A 75 ALA GLN PRO LEU CYS CYS VAL ALA PRO VAL ALA GLY GLN SEQRES 6 A 75 ALA LEU LEU CYS GLN THR ALA VAL GLY ALA SEQRES 1 B 75 SER ASN GLY ASN GLY ASN VAL CYS PRO PRO GLY LEU PHE SEQRES 2 B 75 SER ASN PRO GLN CYS CYS ALA THR GLN VAL LEU GLY LEU SEQRES 3 B 75 ILE GLY LEU ASP CYS LYS VAL PRO SER GLN ASN VAL TYR SEQRES 4 B 75 ASP GLY THR ASP PHE ARG ASN VAL CYS ALA LYS THR GLY SEQRES 5 B 75 ALA GLN PRO LEU CYS CYS VAL ALA PRO VAL ALA GLY GLN SEQRES 6 B 75 ALA LEU LEU CYS GLN THR ALA VAL GLY ALA SEQRES 1 C 75 SER ASN GLY ASN GLY ASN VAL CYS PRO PRO GLY LEU PHE SEQRES 2 C 75 SER ASN PRO GLN CYS CYS ALA THR GLN VAL LEU GLY LEU SEQRES 3 C 75 ILE GLY LEU ASP CYS LYS VAL PRO SER GLN ASN VAL TYR SEQRES 4 C 75 ASP GLY THR ASP PHE ARG ASN VAL CYS ALA LYS THR GLY SEQRES 5 C 75 ALA GLN PRO LEU CYS CYS VAL ALA PRO VAL ALA GLY GLN SEQRES 6 C 75 ALA LEU LEU CYS GLN THR ALA VAL GLY ALA SEQRES 1 D 75 SER ASN GLY ASN GLY ASN VAL CYS PRO PRO GLY LEU PHE SEQRES 2 D 75 SER ASN PRO GLN CYS CYS ALA THR GLN VAL LEU GLY LEU SEQRES 3 D 75 ILE GLY LEU ASP CYS LYS VAL PRO SER GLN ASN VAL TYR SEQRES 4 D 75 ASP GLY THR ASP PHE ARG ASN VAL CYS ALA LYS THR GLY SEQRES 5 D 75 ALA GLN PRO LEU CYS CYS VAL ALA PRO VAL ALA GLY GLN SEQRES 6 D 75 ALA LEU LEU CYS GLN THR ALA VAL GLY ALA HET ZN A 201 1 HET ZN B 202 1 HET LDA C 301 16 HET LDA B 302 16 HET LDA A 303 16 HET LDA A 304 16 HET LDA B 305 16 HET LDA B 306 16 HET LDA B 307 16 HET LDA B 308 16 HET LDA B 309 16 HET LDA C 310 16 HETNAM ZN ZINC ION HETNAM LDA LAURYL DIMETHYLAMINE-N-OXIDE FORMUL 5 ZN 2(ZN 2+) FORMUL 7 LDA 10(C14 H31 N O) FORMUL 17 HOH *118(H2 O) HELIX 1 1 ASP A 40 LYS A 50 1 11 HELIX 2 2 ASP B 40 LYS B 50 1 11 HELIX 3 3 ASP C 40 LYS C 50 1 11 HELIX 4 4 ASP D 40 LYS D 50 1 11 SHEET 1 A 5 ASN A 15 VAL A 23 0 SHEET 2 A 5 ILE A 27 LYS A 32 -1 O LYS A 32 N CYS A 18 SHEET 3 A 5 GLY A 64 THR A 71 -1 O LEU A 67 N GLY A 28 SHEET 4 A 5 GLN A 54 CYS A 58 -1 N CYS A 57 O GLN A 70 SHEET 5 A 5 ASN A 15 VAL A 23 -1 N ASN A 15 O CYS A 58 SHEET 1 B 5 ASN B 15 VAL B 23 0 SHEET 2 B 5 ILE B 27 LYS B 32 -1 O LYS B 32 N CYS B 18 SHEET 3 B 5 GLY B 64 THR B 71 -1 O GLY B 64 N CYS B 31 SHEET 4 B 5 GLN B 54 CYS B 58 -1 N CYS B 57 O GLN B 70 SHEET 5 B 5 ASN B 15 VAL B 23 -1 N ASN B 15 O CYS B 58 SHEET 1 C 5 ASN C 15 VAL C 23 0 SHEET 2 C 5 ILE C 27 LYS C 32 -1 O LYS C 32 N CYS C 18 SHEET 3 C 5 GLY C 64 THR C 71 -1 O LEU C 67 N GLY C 28 SHEET 4 C 5 GLN C 54 CYS C 58 -1 N CYS C 57 O GLN C 70 SHEET 5 C 5 ASN C 15 VAL C 23 -1 N CYS C 19 O GLN C 54 SHEET 1 D 5 ASN D 15 VAL D 23 0 SHEET 2 D 5 ILE D 27 LYS D 32 -1 O LYS D 32 N CYS D 18 SHEET 3 D 5 GLY D 64 THR D 71 -1 O GLY D 64 N CYS D 31 SHEET 4 D 5 GLN D 54 CYS D 58 -1 N CYS D 57 O GLN D 70 SHEET 5 D 5 ASN D 15 VAL D 23 -1 N CYS D 19 O GLN D 54 SSBOND 1 CYS A 8 CYS A 57 1555 1555 2.04 SSBOND 2 CYS A 18 CYS A 48 1555 1555 2.05 SSBOND 3 CYS A 19 CYS A 31 1555 1555 2.04 SSBOND 4 CYS A 58 CYS A 69 1555 1555 2.04 SSBOND 5 CYS B 8 CYS B 57 1555 1555 2.04 SSBOND 6 CYS B 18 CYS B 48 1555 1555 2.04 SSBOND 7 CYS B 19 CYS B 31 1555 1555 2.04 SSBOND 8 CYS B 58 CYS B 69 1555 1555 2.04 SSBOND 9 CYS C 8 CYS C 57 1555 1555 2.05 SSBOND 10 CYS C 18 CYS C 48 1555 1555 2.05 SSBOND 11 CYS C 19 CYS C 31 1555 1555 2.04 SSBOND 12 CYS C 58 CYS C 69 1555 1555 2.04 SSBOND 13 CYS D 8 CYS D 57 1555 1555 2.04 SSBOND 14 CYS D 18 CYS D 48 1555 1555 2.04 SSBOND 15 CYS D 19 CYS D 31 1555 1555 2.04 SSBOND 16 CYS D 58 CYS D 69 1555 1555 2.04 LINK ZN ZN A 201 OD1 ASP A 43 1555 1555 1.98 LINK ZN ZN A 201 OD2 ASP A 43 1555 1555 2.48 LINK ZN ZN A 201 O HOH A 305 1555 1555 2.25 LINK ZN ZN B 202 OD1 ASP B 43 1555 1555 2.77 LINK ZN ZN B 202 OD2 ASP B 43 1555 1555 2.24 LINK ZN ZN B 202 OD1 ASP B 40 1555 1555 2.17 LINK ZN ZN B 202 O HOH B 328 1555 1555 2.10 LINK ZN ZN A 201 OD1 ASP D 40 1555 7444 2.74 LINK ZN ZN A 201 OD2 ASP D 40 1555 7444 2.12 LINK ZN ZN A 201 OD2 ASP D 43 1555 7444 2.23 LINK ZN ZN A 201 OD1 ASP D 43 1555 7444 2.75 LINK ZN ZN B 202 OD1 ASP C 43 1555 6454 2.62 LINK ZN ZN B 202 OD2 ASP C 43 1555 6454 2.22 SITE 1 AC1 4 ASP A 43 HOH A 305 ASP D 40 ASP D 43 SITE 1 AC2 5 ASP B 40 ASP B 43 HOH B 328 GLN C 36 SITE 2 AC2 5 ASP C 43 SITE 1 AC3 3 LEU B 12 PHE B 13 LDA C 310 SITE 1 AC4 2 ILE A 27 LDA C 310 SITE 1 AC5 2 LDA B 305 LDA B 306 SITE 1 AC6 2 LDA A 304 LDA B 308 SITE 1 AC7 1 LDA A 304 SITE 1 AC8 6 THR B 21 GLN B 22 VAL B 23 LEU B 29 SITE 2 AC8 6 LDA B 309 LEU C 24 SITE 1 AC9 5 ALA A 66 ASP B 30 LDA B 305 HOH B 324 SITE 2 AC9 5 VAL C 23 SITE 1 BC1 1 LDA B 307 SITE 1 BC2 4 LDA A 303 LDA B 302 GLN C 65 VAL D 23 CRYST1 91.900 121.600 121.200 90.00 90.00 90.00 C 2 2 21 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010881 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008224 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008251 0.00000 MASTER 501 0 12 4 20 0 14 6 0 0 0 24 END