HEADER OXIDOREDUCTASE 27-APR-06 2GT3 TITLE SOLUTION STRUCTURE AND DYNAMICS OF THE REDUCED FORM OF TITLE 2 METHIONINE SULFOXIDE REDUCTASE A FROM ESCHERICHIA COLI, A TITLE 3 23 KDA PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHIONINE SULFOXIDE REDUCTASE A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: REDUCTASE; COMPND 5 EC: 1.8.4.6 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562 KEYWDS L-METHIONINE SULFOXIDE, MET-(S)-SO, L-METHIONINE-(S)- KEYWDS 2 SULFOXIDE, MET-(R)-SO, L-METHIONINE-(R)-SULFOXIDE, MSR, KEYWDS 3 METHIONINE SULFOXIDE REDUCTASE, NMR, NUCLEAR MAGNETIC KEYWDS 4 RESONANCE; HSQC, HETERONUCLEAR SINGLE QUANTUM COHERENCE, KEYWDS 5 NOE, NUCLEAR OVERHAUSER EFFECT, NOESY, NOE SPECTROSCOPY, KEYWDS 6 RDC, RESIDUAL DIPOLAR COUPLING, RMS, ROOT MEAN SQUARE, RMSD, KEYWDS 7 RMS DEVIATION, ROS, REACTIVE OXYGEN SPECIES., OXIDOREDUCTASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR N.COUDEVYLLE,M.T.CUNG REVDAT 2 24-FEB-09 2GT3 1 VERSN REVDAT 1 27-FEB-07 2GT3 0 JRNL AUTH N.COUDEVYLLE,M.ANTOINE,S.BOUGUET-BONNET, JRNL AUTH 2 P.MUTZENHARDT,S.BOSCHI-MULLER,G.BRANLANT,M.T.CUNG JRNL TITL SOLUTION STRUCTURE AND BACKBONE DYNAMICS OF THE JRNL TITL 2 REDUCED FORM AND AN OXIDIZED FORM OF E. COLI JRNL TITL 3 METHIONINE SULFOXIDE REDUCTASE A (MSRA): JRNL TITL 4 STRUCTURAL INSIGHT OF THE MSRA CATALYTIC CYCLE. JRNL REF J.MOL.BIOL. V. 366 193 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17157315 JRNL DOI 10.1016/J.JMB.2006.11.042 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 2 REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2GT3 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAY-06. REMARK 100 THE RCSB ID CODE IS RCSB037515. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.1 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM MSRA, 1MM DTT, 50 MM REMARK 210 KPI, PH 7.1, 90 % H2O, 10 % D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DYANA 2 REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 104 -65.01 -101.98 REMARK 500 1 MET A 124 44.13 -87.02 REMARK 500 1 LEU A 207 153.29 -48.95 REMARK 500 2 HIS A 7 98.13 -60.26 REMARK 500 2 MET A 49 39.24 -141.60 REMARK 500 2 CYS A 51 109.99 -44.68 REMARK 500 2 ASN A 79 61.83 39.96 REMARK 500 2 PRO A 120 24.44 -74.97 REMARK 500 2 GLU A 183 158.44 -46.57 REMARK 500 2 ILE A 203 -62.74 -120.18 REMARK 500 2 CYS A 206 -59.75 -120.29 REMARK 500 3 LYS A 5 30.05 -87.19 REMARK 500 3 CYS A 51 109.65 -43.53 REMARK 500 3 MET A 124 59.21 -69.27 REMARK 500 3 TYR A 134 44.51 -108.35 REMARK 500 3 ASP A 164 8.20 81.47 REMARK 500 4 ASP A 4 58.71 -140.05 REMARK 500 4 LYS A 5 30.02 -87.23 REMARK 500 4 HIS A 7 105.95 -59.96 REMARK 500 4 CYS A 51 109.83 -41.89 REMARK 500 4 ASN A 117 -47.81 -130.55 REMARK 500 4 MET A 124 62.39 -68.70 REMARK 500 4 ARG A 125 157.82 179.91 REMARK 500 4 ASP A 164 30.45 71.02 REMARK 500 5 ALA A 14 159.32 -49.28 REMARK 500 5 LEU A 15 105.69 -49.49 REMARK 500 5 ARG A 18 145.99 -171.07 REMARK 500 5 CYS A 51 109.86 -42.44 REMARK 500 5 ASN A 79 62.24 60.36 REMARK 500 5 VAL A 104 -63.11 -94.27 REMARK 500 5 MET A 124 48.19 -85.30 REMARK 500 5 ASN A 175 151.30 -43.74 REMARK 500 5 GLU A 210 97.76 -57.01 REMARK 500 6 PHE A 3 96.03 -60.33 REMARK 500 6 LYS A 5 30.40 -87.04 REMARK 500 6 HIS A 7 105.88 -59.92 REMARK 500 6 CYS A 51 109.72 -41.89 REMARK 500 6 VAL A 104 -60.66 -104.39 REMARK 500 6 ALA A 121 50.28 -140.35 REMARK 500 6 MET A 124 42.17 -88.18 REMARK 500 6 ARG A 125 148.16 179.80 REMARK 500 6 ASP A 164 27.45 81.95 REMARK 500 7 LYS A 5 30.11 -87.21 REMARK 500 7 ASN A 19 91.13 -66.95 REMARK 500 7 ALA A 121 50.29 -109.35 REMARK 500 7 MET A 124 44.57 -84.40 REMARK 500 7 TYR A 134 54.42 -113.95 REMARK 500 7 ARG A 167 162.27 -49.99 REMARK 500 7 ILE A 203 -56.04 -123.46 REMARK 500 7 CYS A 206 98.51 -53.57 REMARK 500 8 ASP A 4 56.24 -93.11 REMARK 500 8 HIS A 28 171.05 -57.65 REMARK 500 8 MET A 49 46.84 -142.19 REMARK 500 8 VAL A 104 -61.51 -108.22 REMARK 500 8 ALA A 121 50.16 -115.52 REMARK 500 8 MET A 124 61.74 -107.71 REMARK 500 8 ARG A 125 160.40 179.95 REMARK 500 8 TYR A 134 52.37 -104.07 REMARK 500 8 ASN A 175 161.44 -49.85 REMARK 500 8 CYS A 198 -169.88 -113.83 REMARK 500 8 LEU A 207 160.10 -44.45 REMARK 500 9 VAL A 9 151.21 -41.51 REMARK 500 9 ALA A 121 49.88 -104.22 REMARK 500 9 MET A 124 46.05 -86.59 REMARK 500 9 ARG A 125 143.59 179.85 REMARK 500 9 TYR A 134 43.97 -91.28 REMARK 500 9 CYS A 206 86.19 -60.46 REMARK 500 10 LYS A 5 30.11 -87.30 REMARK 500 10 ALA A 14 151.14 -49.70 REMARK 500 10 LEU A 15 109.35 -56.49 REMARK 500 10 ASN A 19 172.73 -49.31 REMARK 500 10 CYS A 51 108.58 -43.42 REMARK 500 10 ASN A 79 65.27 39.76 REMARK 500 11 LEU A 8 158.89 -48.78 REMARK 500 11 ASN A 19 77.14 -100.89 REMARK 500 11 HIS A 28 170.40 -58.97 REMARK 500 11 CYS A 51 109.97 -41.50 REMARK 500 11 ASN A 117 -50.56 -131.06 REMARK 500 11 ARG A 125 170.05 179.94 REMARK 500 11 ARG A 167 155.37 -49.99 REMARK 500 11 GLU A 183 158.38 -44.95 REMARK 500 11 TYR A 197 109.12 -49.62 REMARK 500 12 ALA A 121 48.99 -105.71 REMARK 500 12 TYR A 134 37.42 -97.58 REMARK 500 12 GLN A 188 49.42 34.78 REMARK 500 13 ALA A 14 160.17 -49.49 REMARK 500 13 VAL A 104 -61.72 -106.11 REMARK 500 13 PRO A 120 28.90 -74.99 REMARK 500 13 ALA A 121 49.53 -140.11 REMARK 500 13 ARG A 125 145.72 179.73 REMARK 500 13 ILE A 169 94.50 -67.89 REMARK 500 14 ALA A 14 159.13 -49.87 REMARK 500 14 CYS A 51 109.16 -45.10 REMARK 500 14 ARG A 125 158.09 179.57 REMARK 500 14 ASP A 164 45.72 73.31 REMARK 500 14 ILE A 203 -55.18 -133.63 REMARK 500 15 LYS A 5 30.72 -87.19 REMARK 500 15 SER A 34 121.59 -39.60 REMARK 500 15 CYS A 51 109.45 -40.88 REMARK 500 15 ARG A 125 163.69 179.45 REMARK 500 15 CYS A 198 -60.68 -124.09 REMARK 500 16 MET A 49 16.05 -142.80 REMARK 500 16 CYS A 51 109.46 -40.76 REMARK 500 16 ARG A 125 152.43 179.88 REMARK 500 16 ARG A 135 -166.72 -113.07 REMARK 500 16 ASN A 175 158.02 -46.59 REMARK 500 16 ILE A 203 -58.78 -131.14 REMARK 500 16 CYS A 206 104.32 -53.08 REMARK 500 17 CYS A 51 109.86 -40.34 REMARK 500 17 VAL A 104 -61.30 -100.18 REMARK 500 17 ASN A 117 36.65 -91.74 REMARK 500 17 ALA A 121 50.23 -140.29 REMARK 500 17 MET A 124 45.86 -84.99 REMARK 500 17 TYR A 134 37.62 -97.94 REMARK 500 17 PRO A 209 -75.83 -74.86 REMARK 500 18 ASN A 79 62.87 39.83 REMARK 500 18 TYR A 134 35.49 -89.58 REMARK 500 18 ASN A 175 155.10 -47.96 REMARK 500 19 ASP A 4 55.73 -118.30 REMARK 500 19 VAL A 9 143.94 -37.57 REMARK 500 19 ALA A 14 160.91 -49.56 REMARK 500 19 MET A 49 17.73 -141.86 REMARK 500 19 PRO A 120 30.55 -75.03 REMARK 500 19 ARG A 125 168.20 179.33 REMARK 500 19 ASN A 175 154.42 -44.86 REMARK 500 19 GLU A 183 161.94 -46.62 REMARK 500 19 CYS A 198 -49.59 -131.46 REMARK 500 19 ILE A 203 -55.19 -130.37 REMARK 500 20 LYS A 5 -73.44 -70.93 REMARK 500 20 VAL A 9 145.99 -38.55 REMARK 500 20 ALA A 14 161.00 -49.28 REMARK 500 20 HIS A 28 170.75 -50.79 REMARK 500 20 CYS A 51 108.93 -41.98 REMARK 500 20 VAL A 104 -65.60 -101.72 REMARK 500 20 ALA A 121 50.15 -116.42 REMARK 500 20 ARG A 125 170.37 179.05 REMARK 500 20 ASP A 164 -1.27 80.78 REMARK 500 20 CYS A 198 -48.32 -131.07 REMARK 500 20 CYS A 206 102.84 -47.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6093 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE AND DYNAMICS OF THE REDUCED FORM OF REMARK 900 METHIONINE SULFOXIDE REDUCTASE A FROM ESCHERICHIA COLI, A REMARK 900 23 KDA PROTEIN DBREF 2GT3 A 1 211 UNP P0A744 MSRA_ECOLI 1 211 SEQADV 2GT3 MET A 0 UNP P0A744 INITIATING METHIONINE SEQRES 1 A 212 MET SER LEU PHE ASP LYS LYS HIS LEU VAL SER PRO ALA SEQRES 2 A 212 ASP ALA LEU PRO GLY ARG ASN THR PRO MET PRO VAL ALA SEQRES 3 A 212 THR LEU HIS ALA VAL ASN GLY HIS SER MET THR ASN VAL SEQRES 4 A 212 PRO ASP GLY MET GLU ILE ALA ILE PHE ALA MET GLY CYS SEQRES 5 A 212 PHE TRP GLY VAL GLU ARG LEU PHE TRP GLN LEU PRO GLY SEQRES 6 A 212 VAL TYR SER THR ALA ALA GLY TYR THR GLY GLY TYR THR SEQRES 7 A 212 PRO ASN PRO THR TYR ARG GLU VAL CYS SER GLY ASP THR SEQRES 8 A 212 GLY HIS ALA GLU ALA VAL ARG ILE VAL TYR ASP PRO SER SEQRES 9 A 212 VAL ILE SER TYR GLU GLN LEU LEU GLN VAL PHE TRP GLU SEQRES 10 A 212 ASN HIS ASP PRO ALA GLN GLY MET ARG GLN GLY ASN ASP SEQRES 11 A 212 HIS GLY THR GLN TYR ARG SER ALA ILE TYR PRO LEU THR SEQRES 12 A 212 PRO GLU GLN ASP ALA ALA ALA ARG ALA SER LEU GLU ARG SEQRES 13 A 212 PHE GLN ALA ALA MET LEU ALA ALA ASP ASP ASP ARG HIS SEQRES 14 A 212 ILE THR THR GLU ILE ALA ASN ALA THR PRO PHE TYR TYR SEQRES 15 A 212 ALA GLU ASP ASP HIS GLN GLN TYR LEU HIS LYS ASN PRO SEQRES 16 A 212 TYR GLY TYR CYS GLY ILE GLY GLY ILE GLY VAL CYS LEU SEQRES 17 A 212 PRO PRO GLU ALA HELIX 1 1 CYS A 51 GLN A 61 1 11 HELIX 2 2 THR A 81 GLY A 88 1 8 HELIX 3 3 SER A 106 HIS A 118 1 13 HELIX 4 4 THR A 142 ALA A 163 1 22 HELIX 5 5 GLN A 188 ASN A 193 1 6 SHEET 1 A 6 GLU A 172 ILE A 173 0 SHEET 2 A 6 ALA A 137 TYR A 139 1 N ILE A 138 O GLU A 172 SHEET 3 A 6 GLU A 43 ALA A 48 -1 N ALA A 48 O ALA A 137 SHEET 4 A 6 ALA A 93 TYR A 100 -1 O ILE A 98 N ALA A 45 SHEET 5 A 6 VAL A 65 THR A 73 -1 N THR A 73 O ALA A 93 SHEET 6 A 6 TYR A 180 TYR A 181 -1 O TYR A 180 N TYR A 72 SHEET 1 B 2 ARG A 125 GLN A 126 0 SHEET 2 B 2 ASP A 129 HIS A 130 -1 O ASP A 129 N GLN A 126 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 217 0 0 5 8 0 0 6 0 0 0 17 END