HEADER SIGNALING PROTEIN 21-APR-06 2GQI TITLE SOLUTION STRUCTURE OF THE SH3 DOMAIN OF HUMAN RAS GTPASE- TITLE 2 ACTIVATING PROTEIN 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAS GTPASE-ACTIVATING PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SH3 DOMAIN; COMPND 5 SYNONYM: GTPASE-ACTIVATING PROTEIN, GAP, RAS P21 PROTEIN COMPND 6 ACTIVATOR, P120GAP, RASGAP; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RASA1, RASA; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P050711-04; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS GTPASE-ACTIVATING PROTEIN, GAP, RAS P21 PROTEIN ACTIVATOR, KEYWDS 2 P120GAP, RASGAP, STRUCTURAL GENOMICS, NPPSFA, NATIONAL KEYWDS 3 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, KEYWDS 4 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 5 SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.KUROSAKI,F.HAYASHI,M.YOSHIDA,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 2 24-FEB-09 2GQI 1 VERSN REVDAT 1 21-OCT-06 2GQI 0 JRNL AUTH C.KUROSAKI,F.HAYASHI,M.YOSHIDA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE SH3 DOMAIN OF HUMAN RAS JRNL TITL 2 GTPASE-ACTIVATING PROTEIN 1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2GQI COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-APR-06. REMARK 100 THE RCSB ID CODE IS RCSB037430. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.17MM 13C, 15N-LABELED REMARK 210 PROTEIN; 20MM D-TRIS-HCL (PH REMARK 210 7.0); 100MM NACL; 1MM D-DTT; REMARK 210 0.02% NAN3, 10% D2O; 90% H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ, 700 MHZ REMARK 210 SPECTROMETER MODEL : ECA REMARK 210 SPECTROMETER MANUFACTURER : JEOL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DELTA NMR 4.3.2, NMRPIPE REMARK 210 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.934, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: SPECTROMETER_ID 1 FOR 3D_15N-SEPARATED_NOESY; REMARK 210 SPECTROMETER_ID 2 FOR 3D_13C-SEPARATED_NOESY REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 18 151.62 -36.64 REMARK 500 1 ASP A 21 51.17 72.77 REMARK 500 1 GLU A 24 152.59 -37.81 REMARK 500 2 LYS A 18 169.43 -46.28 REMARK 500 2 LYS A 29 105.78 -51.09 REMARK 500 3 ALA A 12 95.33 -69.09 REMARK 500 3 LYS A 29 104.32 -59.82 REMARK 500 3 ASN A 48 139.97 -37.75 REMARK 500 4 LYS A 18 146.77 -35.18 REMARK 500 4 ASP A 21 40.72 73.98 REMARK 500 4 GLU A 24 139.37 -34.63 REMARK 500 4 TRP A 45 98.97 -59.83 REMARK 500 5 SER A 2 49.48 37.86 REMARK 500 5 LYS A 18 155.45 -40.52 REMARK 500 5 TRP A 45 93.14 -62.10 REMARK 500 5 ASN A 48 150.52 -47.13 REMARK 500 6 LYS A 29 136.32 -38.53 REMARK 500 6 ASP A 31 125.12 -34.52 REMARK 500 6 TRP A 45 89.99 -69.86 REMARK 500 6 PRO A 68 1.38 -69.79 REMARK 500 6 SER A 70 116.08 -35.14 REMARK 500 7 SER A 2 85.10 -64.22 REMARK 500 7 SER A 5 102.27 -59.07 REMARK 500 7 LYS A 18 162.91 -48.84 REMARK 500 7 VAL A 35 109.82 -59.40 REMARK 500 7 TRP A 45 86.31 -64.71 REMARK 500 8 SER A 2 42.23 35.79 REMARK 500 8 ARG A 8 155.07 -41.73 REMARK 500 8 LYS A 18 156.11 -43.50 REMARK 500 8 ASP A 21 40.08 70.50 REMARK 500 8 TRP A 45 91.50 -59.30 REMARK 500 8 PRO A 68 0.18 -69.75 REMARK 500 9 SER A 3 109.53 -58.27 REMARK 500 9 VAL A 35 100.35 -52.96 REMARK 500 9 TRP A 45 96.32 -67.30 REMARK 500 9 PRO A 68 1.17 -69.82 REMARK 500 9 SER A 70 107.87 -35.97 REMARK 500 10 LYS A 18 154.12 -37.42 REMARK 500 11 LYS A 18 151.85 -39.79 REMARK 500 11 ASP A 21 51.23 71.71 REMARK 500 11 GLU A 24 147.52 -37.25 REMARK 500 11 VAL A 35 109.90 -50.66 REMARK 500 11 TRP A 45 93.92 -63.81 REMARK 500 12 ARG A 8 121.56 -37.43 REMARK 500 12 TRP A 45 89.02 -68.53 REMARK 500 12 PRO A 68 94.93 -69.75 REMARK 500 13 SER A 3 146.79 -37.07 REMARK 500 13 ALA A 12 94.80 -67.69 REMARK 500 13 ASP A 21 45.97 72.62 REMARK 500 13 VAL A 35 117.09 -39.95 REMARK 500 14 ALA A 12 94.59 -68.18 REMARK 500 14 GLU A 24 137.05 -38.26 REMARK 500 14 TRP A 43 173.95 -52.95 REMARK 500 14 TRP A 45 86.13 -63.65 REMARK 500 15 LYS A 18 163.78 -43.18 REMARK 500 15 ASP A 21 37.30 71.37 REMARK 500 15 ASP A 41 -25.93 -39.02 REMARK 500 15 TRP A 45 95.50 -62.45 REMARK 500 15 PRO A 68 2.85 -69.85 REMARK 500 15 SER A 70 143.58 -37.15 REMARK 500 16 ALA A 12 95.47 -63.73 REMARK 500 16 LYS A 18 144.24 -36.61 REMARK 500 16 ASP A 21 52.88 72.99 REMARK 500 16 ASP A 31 127.88 -38.92 REMARK 500 16 TRP A 45 85.86 -67.30 REMARK 500 17 SER A 2 -47.53 -130.30 REMARK 500 17 TRP A 45 84.12 -67.14 REMARK 500 17 ASN A 48 148.71 -39.25 REMARK 500 17 VAL A 65 65.44 -100.90 REMARK 500 18 SER A 5 85.64 -64.93 REMARK 500 18 LYS A 18 148.01 -39.69 REMARK 500 18 VAL A 65 -60.93 -122.44 REMARK 500 19 SER A 5 48.14 -101.44 REMARK 500 19 SER A 6 36.03 39.32 REMARK 500 19 ASP A 21 36.76 72.49 REMARK 500 19 VAL A 35 98.66 -58.82 REMARK 500 19 TRP A 45 93.08 -65.22 REMARK 500 19 ASN A 48 139.63 -36.58 REMARK 500 20 SER A 6 -63.87 -95.31 REMARK 500 20 ASP A 21 33.32 74.52 REMARK 500 20 TRP A 45 95.11 -61.00 REMARK 500 20 VAL A 65 31.10 -95.64 REMARK 500 REMARK 500 REMARK: NULL DBREF 2GQI A 8 65 UNP P20936 RASA1_HUMAN 282 339 SEQADV 2GQI GLY A 1 UNP P20936 CLONING ARTIFACT SEQADV 2GQI SER A 2 UNP P20936 CLONING ARTIFACT SEQADV 2GQI SER A 3 UNP P20936 CLONING ARTIFACT SEQADV 2GQI GLY A 4 UNP P20936 CLONING ARTIFACT SEQADV 2GQI SER A 5 UNP P20936 CLONING ARTIFACT SEQADV 2GQI SER A 6 UNP P20936 CLONING ARTIFACT SEQADV 2GQI GLY A 7 UNP P20936 CLONING ARTIFACT SEQADV 2GQI SER A 66 UNP P20936 CLONING ARTIFACT SEQADV 2GQI GLY A 67 UNP P20936 CLONING ARTIFACT SEQADV 2GQI PRO A 68 UNP P20936 CLONING ARTIFACT SEQADV 2GQI SER A 69 UNP P20936 CLONING ARTIFACT SEQADV 2GQI SER A 70 UNP P20936 CLONING ARTIFACT SEQADV 2GQI GLY A 71 UNP P20936 CLONING ARTIFACT SEQRES 1 A 71 GLY SER SER GLY SER SER GLY ARG ARG VAL ARG ALA ILE SEQRES 2 A 71 LEU PRO TYR THR LYS VAL PRO ASP THR ASP GLU ILE SER SEQRES 3 A 71 PHE LEU LYS GLY ASP MET PHE ILE VAL HIS ASN GLU LEU SEQRES 4 A 71 GLU ASP GLY TRP MET TRP VAL THR ASN LEU ARG THR ASP SEQRES 5 A 71 GLU GLN GLY LEU ILE VAL GLU ASP LEU VAL GLU GLU VAL SEQRES 6 A 71 SER GLY PRO SER SER GLY SHEET 1 A 2 VAL A 10 ALA A 12 0 SHEET 2 A 2 VAL A 62 GLU A 64 -1 O GLU A 63 N ARG A 11 SHEET 1 B 3 ASN A 37 GLU A 38 0 SHEET 2 B 3 MET A 44 THR A 47 -1 O TRP A 45 N ASN A 37 SHEET 3 B 3 GLN A 54 ILE A 57 -1 O GLY A 55 N VAL A 46 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 154 0 0 0 5 0 0 6 0 0 0 6 END