HEADER TRANSFERASE 16-MAR-06 2GDR TITLE CRYSTAL STRUCTURE OF A BACTERIAL GLUTATHIONE TRANSFERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 EC: 2.5.1.18; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA XENOVORANS; SOURCE 3 ORGANISM_TAXID: 266265; SOURCE 4 STRAIN: LB400; SOURCE 5 GENE: BPHK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN HOMODIMER, EACH MONOMER CONTAINS TWO DOMAINS, N-TERM DOMAIN KEYWDS 2 IS MIXED BETA SHEETS AND ALPHA HELICES, C-TERM DOMAIN IS ALPHA KEYWDS 3 HELICAL, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR E.I.TOCHEVA,P.D.FORTIN,L.D.ELTIS,M.E.P.MURPHY REVDAT 5 14-DEC-11 2GDR 1 HETATM HETNAM REVDAT 4 13-JUL-11 2GDR 1 VERSN REVDAT 3 24-FEB-09 2GDR 1 VERSN REVDAT 2 31-OCT-06 2GDR 1 JRNL REVDAT 1 22-AUG-06 2GDR 0 JRNL AUTH E.I.TOCHEVA,P.D.FORTIN,L.D.ELTIS,M.E.MURPHY JRNL TITL STRUCTURES OF TERNARY COMPLEXES OF BPHK, A BACTERIAL JRNL TITL 2 GLUTATHIONE S-TRANSFERASE THAT REDUCTIVELY DECHLORINATES JRNL TITL 3 POLYCHLORINATED BIPHENYL METABOLITES. JRNL REF J.BIOL.CHEM. V. 281 30933 2006 JRNL REFN ISSN 0021-9258 JRNL PMID 16920719 JRNL DOI 10.1074/JBC.M603125200 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 87648 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 4153 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.18 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 334 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9414 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 180 REMARK 3 SOLVENT ATOMS : 215 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE TWINNING OPERATOR IS H,-H-K,-L. THE REMARK 3 TWINNING FRACTION IS 0.45. REMARK 4 REMARK 4 2GDR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-APR-06. REMARK 100 THE RCSB ID CODE IS RCSB036992. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-APR-05 REMARK 200 TEMPERATURE (KELVIN) : 200 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97974 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 92159 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.38400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 2GDH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1M K/NA TARTRATE, 0.1 M MES, PH 6, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 323K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 174.85333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 87.42667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 131.14000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 43.71333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 218.56667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS B 202 REMARK 465 LYS D 202 REMARK 465 LYS F 202 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 110 O32 GSH B 225 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 65 111.42 78.82 REMARK 500 GLN A 81 74.96 -63.95 REMARK 500 ALA A 83 127.97 -171.83 REMARK 500 LEU A 105 -60.44 -124.42 REMARK 500 GLU A 120 32.71 -79.42 REMARK 500 TRP A 121 -44.75 -152.01 REMARK 500 HIS A 142 -80.27 -48.97 REMARK 500 ALA B 9 -175.29 -59.96 REMARK 500 LEU B 32 -8.67 -57.62 REMARK 500 THR B 37 -176.86 -66.72 REMARK 500 GLU B 65 114.53 75.53 REMARK 500 LEU B 105 -59.69 -134.94 REMARK 500 ALA B 116 32.54 -86.07 REMARK 500 ILE B 170 68.39 -107.33 REMARK 500 ASP B 171 129.26 -38.53 REMARK 500 TRP B 175 69.85 -119.13 REMARK 500 LEU B 200 21.66 -75.80 REMARK 500 THR C 37 -174.33 -56.99 REMARK 500 GLU C 65 111.83 80.99 REMARK 500 ASN C 169 55.93 28.18 REMARK 500 GLU D 65 113.38 80.64 REMARK 500 LEU D 105 -69.40 -129.32 REMARK 500 ALA D 116 -18.83 -49.12 REMARK 500 ALA E 9 173.83 -57.24 REMARK 500 ALA E 33 -68.49 -91.39 REMARK 500 GLU E 65 112.22 79.95 REMARK 500 LEU E 105 -63.13 -125.38 REMARK 500 TRP E 121 -62.99 -90.32 REMARK 500 ASN E 169 82.25 47.82 REMARK 500 GLU F 65 120.29 80.27 REMARK 500 ALA F 116 38.22 -76.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH A 224 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH B 224 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH B 225 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH C 224 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH D 224 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH D 225 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH E 224 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH F 224 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH F 225 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2GDH RELATED DB: PDB REMARK 900 GLUTATHIONE TRANSFERASE FROM B. XENOVORANS LB400 (BPHK) REMARK 900 BOUND TO GSH AND HOPDA REMARK 900 RELATED ID: 1F2E RELATED DB: PDB REMARK 900 GLUTATHIONE TRANSFERASE FROM S. PAUCIMOBILIS BOUND TO GSH REMARK 900 RELATED ID: 1PMT RELATED DB: PDB REMARK 900 GLUTATHIONE TRANSFERASE FROM P. MIRABILIS BOUND TO GSH REMARK 900 RELATED ID: 1N2A RELATED DB: PDB REMARK 900 GLUTATHIONE TRANSFERASE FROM E. COLI BOUND TO GSO DBREF 2GDR A 1 202 GB 27528348 CAD44474 1 202 DBREF 2GDR B 1 202 GB 27528348 CAD44474 1 202 DBREF 2GDR C 1 202 GB 27528348 CAD44474 1 202 DBREF 2GDR D 1 202 GB 27528348 CAD44474 1 202 DBREF 2GDR E 1 202 GB 27528348 CAD44474 1 202 DBREF 2GDR F 1 202 GB 27528348 CAD44474 1 202 SEQRES 1 A 202 MET LYS LEU TYR TYR SER PRO GLY ALA CYS SER LEU SER SEQRES 2 A 202 PRO HIS ILE ALA LEU ARG GLU ALA GLY LEU ASN PHE GLU SEQRES 3 A 202 LEU VAL GLN VAL ASP LEU ALA SER LYS LYS THR ALA SER SEQRES 4 A 202 GLY GLN ASP TYR LEU GLU VAL ASN PRO ALA GLY TYR VAL SEQRES 5 A 202 PRO CYS LEU GLN LEU ASP ASP GLY ARG THR LEU THR GLU SEQRES 6 A 202 GLY PRO ALA ILE VAL GLN TYR VAL ALA ASP GLN VAL PRO SEQRES 7 A 202 GLY LYS GLN LEU ALA PRO ALA ASN GLY SER PHE GLU ARG SEQRES 8 A 202 TYR HIS LEU GLN GLN TRP LEU ASN PHE ILE SER SER GLU SEQRES 9 A 202 LEU HIS LYS SER PHE SER PRO LEU PHE ASN PRO ALA SER SEQRES 10 A 202 SER ASP GLU TRP LYS ASN ALA VAL ARG GLN SER LEU ASN SEQRES 11 A 202 THR ARG LEU GLY GLN VAL ALA ARG GLN LEU GLU HIS ALA SEQRES 12 A 202 PRO TYR LEU LEU GLY ASP GLN LEU SER VAL ALA ASP ILE SEQRES 13 A 202 TYR LEU PHE VAL VAL LEU GLY TRP SER ALA TYR VAL ASN SEQRES 14 A 202 ILE ASP LEU SER PRO TRP PRO SER LEU GLN ALA PHE GLN SEQRES 15 A 202 GLY ARG VAL GLY GLY ARG GLU ALA VAL GLN SER ALA LEU SEQRES 16 A 202 ARG ALA GLU GLY LEU ILE LYS SEQRES 1 B 202 MET LYS LEU TYR TYR SER PRO GLY ALA CYS SER LEU SER SEQRES 2 B 202 PRO HIS ILE ALA LEU ARG GLU ALA GLY LEU ASN PHE GLU SEQRES 3 B 202 LEU VAL GLN VAL ASP LEU ALA SER LYS LYS THR ALA SER SEQRES 4 B 202 GLY GLN ASP TYR LEU GLU VAL ASN PRO ALA GLY TYR VAL SEQRES 5 B 202 PRO CYS LEU GLN LEU ASP ASP GLY ARG THR LEU THR GLU SEQRES 6 B 202 GLY PRO ALA ILE VAL GLN TYR VAL ALA ASP GLN VAL PRO SEQRES 7 B 202 GLY LYS GLN LEU ALA PRO ALA ASN GLY SER PHE GLU ARG SEQRES 8 B 202 TYR HIS LEU GLN GLN TRP LEU ASN PHE ILE SER SER GLU SEQRES 9 B 202 LEU HIS LYS SER PHE SER PRO LEU PHE ASN PRO ALA SER SEQRES 10 B 202 SER ASP GLU TRP LYS ASN ALA VAL ARG GLN SER LEU ASN SEQRES 11 B 202 THR ARG LEU GLY GLN VAL ALA ARG GLN LEU GLU HIS ALA SEQRES 12 B 202 PRO TYR LEU LEU GLY ASP GLN LEU SER VAL ALA ASP ILE SEQRES 13 B 202 TYR LEU PHE VAL VAL LEU GLY TRP SER ALA TYR VAL ASN SEQRES 14 B 202 ILE ASP LEU SER PRO TRP PRO SER LEU GLN ALA PHE GLN SEQRES 15 B 202 GLY ARG VAL GLY GLY ARG GLU ALA VAL GLN SER ALA LEU SEQRES 16 B 202 ARG ALA GLU GLY LEU ILE LYS SEQRES 1 C 202 MET LYS LEU TYR TYR SER PRO GLY ALA CYS SER LEU SER SEQRES 2 C 202 PRO HIS ILE ALA LEU ARG GLU ALA GLY LEU ASN PHE GLU SEQRES 3 C 202 LEU VAL GLN VAL ASP LEU ALA SER LYS LYS THR ALA SER SEQRES 4 C 202 GLY GLN ASP TYR LEU GLU VAL ASN PRO ALA GLY TYR VAL SEQRES 5 C 202 PRO CYS LEU GLN LEU ASP ASP GLY ARG THR LEU THR GLU SEQRES 6 C 202 GLY PRO ALA ILE VAL GLN TYR VAL ALA ASP GLN VAL PRO SEQRES 7 C 202 GLY LYS GLN LEU ALA PRO ALA ASN GLY SER PHE GLU ARG SEQRES 8 C 202 TYR HIS LEU GLN GLN TRP LEU ASN PHE ILE SER SER GLU SEQRES 9 C 202 LEU HIS LYS SER PHE SER PRO LEU PHE ASN PRO ALA SER SEQRES 10 C 202 SER ASP GLU TRP LYS ASN ALA VAL ARG GLN SER LEU ASN SEQRES 11 C 202 THR ARG LEU GLY GLN VAL ALA ARG GLN LEU GLU HIS ALA SEQRES 12 C 202 PRO TYR LEU LEU GLY ASP GLN LEU SER VAL ALA ASP ILE SEQRES 13 C 202 TYR LEU PHE VAL VAL LEU GLY TRP SER ALA TYR VAL ASN SEQRES 14 C 202 ILE ASP LEU SER PRO TRP PRO SER LEU GLN ALA PHE GLN SEQRES 15 C 202 GLY ARG VAL GLY GLY ARG GLU ALA VAL GLN SER ALA LEU SEQRES 16 C 202 ARG ALA GLU GLY LEU ILE LYS SEQRES 1 D 202 MET LYS LEU TYR TYR SER PRO GLY ALA CYS SER LEU SER SEQRES 2 D 202 PRO HIS ILE ALA LEU ARG GLU ALA GLY LEU ASN PHE GLU SEQRES 3 D 202 LEU VAL GLN VAL ASP LEU ALA SER LYS LYS THR ALA SER SEQRES 4 D 202 GLY GLN ASP TYR LEU GLU VAL ASN PRO ALA GLY TYR VAL SEQRES 5 D 202 PRO CYS LEU GLN LEU ASP ASP GLY ARG THR LEU THR GLU SEQRES 6 D 202 GLY PRO ALA ILE VAL GLN TYR VAL ALA ASP GLN VAL PRO SEQRES 7 D 202 GLY LYS GLN LEU ALA PRO ALA ASN GLY SER PHE GLU ARG SEQRES 8 D 202 TYR HIS LEU GLN GLN TRP LEU ASN PHE ILE SER SER GLU SEQRES 9 D 202 LEU HIS LYS SER PHE SER PRO LEU PHE ASN PRO ALA SER SEQRES 10 D 202 SER ASP GLU TRP LYS ASN ALA VAL ARG GLN SER LEU ASN SEQRES 11 D 202 THR ARG LEU GLY GLN VAL ALA ARG GLN LEU GLU HIS ALA SEQRES 12 D 202 PRO TYR LEU LEU GLY ASP GLN LEU SER VAL ALA ASP ILE SEQRES 13 D 202 TYR LEU PHE VAL VAL LEU GLY TRP SER ALA TYR VAL ASN SEQRES 14 D 202 ILE ASP LEU SER PRO TRP PRO SER LEU GLN ALA PHE GLN SEQRES 15 D 202 GLY ARG VAL GLY GLY ARG GLU ALA VAL GLN SER ALA LEU SEQRES 16 D 202 ARG ALA GLU GLY LEU ILE LYS SEQRES 1 E 202 MET LYS LEU TYR TYR SER PRO GLY ALA CYS SER LEU SER SEQRES 2 E 202 PRO HIS ILE ALA LEU ARG GLU ALA GLY LEU ASN PHE GLU SEQRES 3 E 202 LEU VAL GLN VAL ASP LEU ALA SER LYS LYS THR ALA SER SEQRES 4 E 202 GLY GLN ASP TYR LEU GLU VAL ASN PRO ALA GLY TYR VAL SEQRES 5 E 202 PRO CYS LEU GLN LEU ASP ASP GLY ARG THR LEU THR GLU SEQRES 6 E 202 GLY PRO ALA ILE VAL GLN TYR VAL ALA ASP GLN VAL PRO SEQRES 7 E 202 GLY LYS GLN LEU ALA PRO ALA ASN GLY SER PHE GLU ARG SEQRES 8 E 202 TYR HIS LEU GLN GLN TRP LEU ASN PHE ILE SER SER GLU SEQRES 9 E 202 LEU HIS LYS SER PHE SER PRO LEU PHE ASN PRO ALA SER SEQRES 10 E 202 SER ASP GLU TRP LYS ASN ALA VAL ARG GLN SER LEU ASN SEQRES 11 E 202 THR ARG LEU GLY GLN VAL ALA ARG GLN LEU GLU HIS ALA SEQRES 12 E 202 PRO TYR LEU LEU GLY ASP GLN LEU SER VAL ALA ASP ILE SEQRES 13 E 202 TYR LEU PHE VAL VAL LEU GLY TRP SER ALA TYR VAL ASN SEQRES 14 E 202 ILE ASP LEU SER PRO TRP PRO SER LEU GLN ALA PHE GLN SEQRES 15 E 202 GLY ARG VAL GLY GLY ARG GLU ALA VAL GLN SER ALA LEU SEQRES 16 E 202 ARG ALA GLU GLY LEU ILE LYS SEQRES 1 F 202 MET LYS LEU TYR TYR SER PRO GLY ALA CYS SER LEU SER SEQRES 2 F 202 PRO HIS ILE ALA LEU ARG GLU ALA GLY LEU ASN PHE GLU SEQRES 3 F 202 LEU VAL GLN VAL ASP LEU ALA SER LYS LYS THR ALA SER SEQRES 4 F 202 GLY GLN ASP TYR LEU GLU VAL ASN PRO ALA GLY TYR VAL SEQRES 5 F 202 PRO CYS LEU GLN LEU ASP ASP GLY ARG THR LEU THR GLU SEQRES 6 F 202 GLY PRO ALA ILE VAL GLN TYR VAL ALA ASP GLN VAL PRO SEQRES 7 F 202 GLY LYS GLN LEU ALA PRO ALA ASN GLY SER PHE GLU ARG SEQRES 8 F 202 TYR HIS LEU GLN GLN TRP LEU ASN PHE ILE SER SER GLU SEQRES 9 F 202 LEU HIS LYS SER PHE SER PRO LEU PHE ASN PRO ALA SER SEQRES 10 F 202 SER ASP GLU TRP LYS ASN ALA VAL ARG GLN SER LEU ASN SEQRES 11 F 202 THR ARG LEU GLY GLN VAL ALA ARG GLN LEU GLU HIS ALA SEQRES 12 F 202 PRO TYR LEU LEU GLY ASP GLN LEU SER VAL ALA ASP ILE SEQRES 13 F 202 TYR LEU PHE VAL VAL LEU GLY TRP SER ALA TYR VAL ASN SEQRES 14 F 202 ILE ASP LEU SER PRO TRP PRO SER LEU GLN ALA PHE GLN SEQRES 15 F 202 GLY ARG VAL GLY GLY ARG GLU ALA VAL GLN SER ALA LEU SEQRES 16 F 202 ARG ALA GLU GLY LEU ILE LYS HET GSH A 224 20 HET GSH B 224 20 HET GSH B 225 20 HET GSH C 224 20 HET GSH D 224 20 HET GSH D 225 20 HET GSH E 224 20 HET GSH F 224 20 HET GSH F 225 20 HETNAM GSH GLUTATHIONE FORMUL 7 GSH 9(C10 H17 N3 O6 S) FORMUL 16 HOH *215(H2 O) HELIX 1 1 SER A 11 GLY A 22 1 12 HELIX 2 2 ASP A 42 VAL A 46 5 5 HELIX 3 3 GLU A 65 ASP A 75 1 11 HELIX 4 4 SER A 88 LEU A 105 1 18 HELIX 5 5 HIS A 106 SER A 108 5 3 HELIX 6 6 PHE A 109 ASN A 114 1 6 HELIX 7 7 SER A 118 ALA A 143 1 26 HELIX 8 8 SER A 152 SER A 165 1 14 HELIX 9 9 ALA A 166 ASN A 169 5 4 HELIX 10 10 TRP A 175 GLY A 186 1 12 HELIX 11 11 ARG A 188 GLU A 198 1 11 HELIX 12 12 SER B 11 ALA B 21 1 11 HELIX 13 13 ASP B 42 ASN B 47 1 6 HELIX 14 14 GLU B 65 VAL B 77 1 13 HELIX 15 15 PRO B 78 GLN B 81 5 4 HELIX 16 16 SER B 88 LEU B 105 1 18 HELIX 17 17 LEU B 105 PHE B 113 1 9 HELIX 18 18 SER B 118 LEU B 140 1 23 HELIX 19 19 SER B 152 GLY B 163 1 12 HELIX 20 20 TRP B 164 ALA B 166 5 3 HELIX 21 21 TRP B 175 GLY B 187 1 13 HELIX 22 22 ARG B 188 GLU B 198 1 11 HELIX 23 23 SER C 11 GLY C 22 1 12 HELIX 24 24 ASP C 42 ASN C 47 1 6 HELIX 25 25 GLU C 65 VAL C 77 1 13 HELIX 26 26 PRO C 78 GLN C 81 5 4 HELIX 27 27 SER C 88 LEU C 105 1 18 HELIX 28 28 LEU C 105 ASN C 114 1 10 HELIX 29 29 SER C 118 LEU C 140 1 23 HELIX 30 30 SER C 152 SER C 165 1 14 HELIX 31 31 TRP C 175 GLY C 187 1 13 HELIX 32 32 ARG C 188 GLU C 198 1 11 HELIX 33 33 SER D 11 GLY D 22 1 12 HELIX 34 34 ASP D 42 ASN D 47 1 6 HELIX 35 35 GLU D 65 VAL D 77 1 13 HELIX 36 36 PRO D 78 GLN D 81 5 4 HELIX 37 37 SER D 88 LEU D 105 1 18 HELIX 38 38 LEU D 105 ASN D 114 1 10 HELIX 39 39 SER D 118 LEU D 140 1 23 HELIX 40 40 SER D 152 GLY D 163 1 12 HELIX 41 41 TRP D 175 GLY D 187 1 13 HELIX 42 42 ARG D 188 GLU D 198 1 11 HELIX 43 43 SER E 11 GLY E 22 1 12 HELIX 44 44 ASP E 42 VAL E 46 5 5 HELIX 45 45 GLU E 65 GLN E 76 1 12 HELIX 46 46 VAL E 77 GLN E 81 5 5 HELIX 47 47 SER E 88 LEU E 105 1 18 HELIX 48 48 LEU E 105 SER E 110 1 6 HELIX 49 49 PRO E 111 ASN E 114 5 4 HELIX 50 50 SER E 118 ALA E 143 1 26 HELIX 51 51 SER E 152 TRP E 164 1 13 HELIX 52 52 SER E 165 ASN E 169 5 5 HELIX 53 53 TRP E 175 GLY E 187 1 13 HELIX 54 54 ARG E 188 GLU E 198 1 11 HELIX 55 55 SER F 11 GLY F 22 1 12 HELIX 56 56 ASP F 42 VAL F 46 5 5 HELIX 57 57 GLU F 65 VAL F 77 1 13 HELIX 58 58 PRO F 78 GLN F 81 5 4 HELIX 59 59 SER F 88 LEU F 105 1 18 HELIX 60 60 LEU F 105 PHE F 113 1 9 HELIX 61 61 SER F 118 LEU F 140 1 23 HELIX 62 62 SER F 152 GLY F 163 1 12 HELIX 63 63 TRP F 175 GLY F 187 1 13 HELIX 64 64 ARG F 188 GLU F 198 1 11 SHEET 1 A 6 THR A 62 THR A 64 0 SHEET 2 A 6 CYS A 54 GLN A 56 -1 N LEU A 55 O LEU A 63 SHEET 3 A 6 LYS A 2 TYR A 5 -1 N TYR A 4 O CYS A 54 SHEET 4 A 6 PHE A 25 GLN A 29 1 O VAL A 28 N LEU A 3 SHEET 5 A 6 GLU D 26 ASP D 31 1 O LEU D 27 N PHE A 25 SHEET 6 A 6 LYS D 36 THR D 37 -1 O LYS D 36 N ASP D 31 SHEET 1 B 8 THR A 62 THR A 64 0 SHEET 2 B 8 CYS A 54 GLN A 56 -1 N LEU A 55 O LEU A 63 SHEET 3 B 8 LYS A 2 TYR A 5 -1 N TYR A 4 O CYS A 54 SHEET 4 B 8 PHE A 25 GLN A 29 1 O VAL A 28 N LEU A 3 SHEET 5 B 8 GLU D 26 ASP D 31 1 O LEU D 27 N PHE A 25 SHEET 6 B 8 LYS D 2 TYR D 5 1 N LEU D 3 O GLU D 26 SHEET 7 B 8 CYS D 54 GLN D 56 -1 O CYS D 54 N TYR D 4 SHEET 8 B 8 THR D 62 THR D 64 -1 O LEU D 63 N LEU D 55 SHEET 1 C 5 LYS B 36 THR B 37 0 SHEET 2 C 5 GLU B 26 ASP B 31 -1 N ASP B 31 O LYS B 36 SHEET 3 C 5 LYS B 2 TYR B 5 1 N LEU B 3 O VAL B 28 SHEET 4 C 5 CYS B 54 GLN B 56 -1 O CYS B 54 N TYR B 4 SHEET 5 C 5 THR B 62 THR B 64 -1 O LEU B 63 N LEU B 55 SHEET 1 D 4 GLU C 26 GLN C 29 0 SHEET 2 D 4 LYS C 2 TYR C 5 1 N LEU C 3 O VAL C 28 SHEET 3 D 4 CYS C 54 GLN C 56 -1 O CYS C 54 N TYR C 4 SHEET 4 D 4 THR C 62 THR C 64 -1 O LEU C 63 N LEU C 55 SHEET 1 E 5 LYS E 36 THR E 37 0 SHEET 2 E 5 GLU E 26 ASP E 31 -1 N ASP E 31 O LYS E 36 SHEET 3 E 5 LYS E 2 TYR E 5 1 N TYR E 5 O VAL E 30 SHEET 4 E 5 CYS E 54 GLN E 56 -1 O GLN E 56 N LYS E 2 SHEET 5 E 5 THR E 62 THR E 64 -1 O LEU E 63 N LEU E 55 SHEET 1 F 5 LYS F 36 THR F 37 0 SHEET 2 F 5 GLU F 26 ASP F 31 -1 N ASP F 31 O LYS F 36 SHEET 3 F 5 LYS F 2 TYR F 5 1 N TYR F 5 O VAL F 30 SHEET 4 F 5 CYS F 54 GLN F 56 -1 O CYS F 54 N TYR F 4 SHEET 5 F 5 THR F 62 THR F 64 -1 O LEU F 63 N LEU F 55 CISPEP 1 VAL A 52 PRO A 53 0 -0.41 CISPEP 2 VAL B 52 PRO B 53 0 0.34 CISPEP 3 VAL C 52 PRO C 53 0 0.31 CISPEP 4 VAL D 52 PRO D 53 0 0.27 CISPEP 5 VAL E 52 PRO E 53 0 2.94 CISPEP 6 VAL F 52 PRO F 53 0 0.22 SITE 1 AC1 15 ALA A 9 CYS A 10 LEU A 32 LYS A 35 SITE 2 AC1 15 TYR A 51 VAL A 52 GLU A 65 GLY A 66 SITE 3 AC1 15 HIS A 106 LYS A 107 HOH A 226 HOH A 228 SITE 4 AC1 15 ASN B 99 SER B 103 GLU B 104 SITE 1 AC2 16 ASN A 99 SER A 103 GLU A 104 CYS B 10 SITE 2 AC2 16 LEU B 32 LYS B 35 TYR B 51 VAL B 52 SITE 3 AC2 16 GLU B 65 GLY B 66 HIS B 106 LYS B 107 SITE 4 AC2 16 GSH B 225 HOH B 230 HOH B 236 HOH B 239 SITE 1 AC3 9 PRO B 7 GLY B 8 ALA B 9 HIS B 106 SITE 2 AC3 9 LYS B 107 SER B 110 PHE B 113 TRP B 164 SITE 3 AC3 9 GSH B 224 SITE 1 AC4 14 CYS C 10 LEU C 32 LYS C 35 TYR C 51 SITE 2 AC4 14 VAL C 52 GLU C 65 GLY C 66 HIS C 106 SITE 3 AC4 14 HOH C 232 HOH C 235 HOH C 238 ASN D 99 SITE 4 AC4 14 SER D 103 GLU D 104 SITE 1 AC5 15 ASN C 99 SER C 103 GLU C 104 CYS D 10 SITE 2 AC5 15 LEU D 32 LYS D 35 TYR D 51 VAL D 52 SITE 3 AC5 15 GLU D 65 GLY D 66 HIS D 106 LYS D 107 SITE 4 AC5 15 GSH D 225 HOH D 226 HOH D 231 SITE 1 AC6 8 ALA D 9 LEU D 32 HIS D 106 SER D 110 SITE 2 AC6 8 PHE D 113 TRP D 164 TYR D 167 GSH D 224 SITE 1 AC7 12 CYS E 10 LEU E 32 LYS E 35 TYR E 51 SITE 2 AC7 12 VAL E 52 GLU E 65 GLY E 66 HOH E 225 SITE 3 AC7 12 HOH E 230 ASN F 99 SER F 103 GLU F 104 SITE 1 AC8 17 ASN E 99 SER E 103 GLU E 104 ALA F 9 SITE 2 AC8 17 CYS F 10 LEU F 32 LYS F 35 TYR F 51 SITE 3 AC8 17 VAL F 52 GLU F 65 GLY F 66 HIS F 106 SITE 4 AC8 17 LYS F 107 GSH F 225 HOH F 242 HOH F 250 SITE 5 AC8 17 HOH F 251 SITE 1 AC9 7 PRO F 7 GLY F 8 HIS F 106 SER F 110 SITE 2 AC9 7 PHE F 113 TYR F 167 GSH F 224 CRYST1 103.440 103.440 262.280 90.00 90.00 120.00 P 65 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009667 0.005581 0.000000 0.00000 SCALE2 0.000000 0.011163 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003813 0.00000 MASTER 362 0 9 64 33 0 31 6 0 0 0 96 END