HEADER REPLICATION/DNA 06-JAN-06 2FLP TITLE BINARY COMPLEX OF THE CATALYTIC CORE OF HUMAN DNA POLYMERASE IOTA WITH TITLE 2 DNA (TEMPLATE G) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA TEMPLATE STRAND; COMPND 3 CHAIN: T; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA PRIMER STRAND; COMPND 7 CHAIN: P; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: DNA POLYMERASE IOTA; COMPND 11 CHAIN: A; COMPND 12 SYNONYM: RAD30 HOMOLOG B, ETA2; COMPND 13 EC: 2.7.7.7; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 SYNTHETIC: YES; SOURCE 5 MOL_ID: 3; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_COMMON: HUMAN; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 GENE: POLI, RAD30B; SOURCE 10 EXPRESSION_SYSTEM: SACCHAROMYCES CEREVISIAE; SOURCE 11 EXPRESSION_SYSTEM_COMMON: BAKER'S YEAST; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 4932; SOURCE 13 EXPRESSION_SYSTEM_STRAIN: BJ5464; SOURCE 14 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 15 EXPRESSION_SYSTEM_PLASMID: PBJ941 KEYWDS DNA POLYMERASE, LESION BYPASS, Y-FAMILY, BINARY COMPLEX, TEMPLATE G, KEYWDS 2 REPLICATION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.T.NAIR,R.E.JOHNSON,L.PRAKASH,S.PRAKASH,A.K.AGGARWAL REVDAT 3 13-JUL-11 2FLP 1 VERSN REVDAT 2 24-FEB-09 2FLP 1 VERSN REVDAT 1 05-DEC-06 2FLP 0 JRNL AUTH D.T.NAIR,R.E.JOHNSON,L.PRAKASH,S.PRAKASH,A.K.AGGARWAL JRNL TITL AN INCOMING NUCLEOTIDE IMPOSES AN ANTI TO SYN CONFORMATIONAL JRNL TITL 2 CHANGE ON THE TEMPLATING PURINE IN THE HUMAN DNA JRNL TITL 3 POLYMERASE-IOTA ACTIVE SITE. JRNL REF STRUCTURE V. 14 749 2006 JRNL REFN ISSN 0969-2126 JRNL PMID 16615915 JRNL DOI 10.1016/J.STR.2006.01.010 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 20314 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.233 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2224 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1408 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2520 REMARK 3 BIN FREE R VALUE SET COUNT : 151 REMARK 3 BIN FREE R VALUE : 0.3440 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2813 REMARK 3 NUCLEIC ACID ATOMS : 322 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 115 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.30000 REMARK 3 B22 (A**2) : 0.30000 REMARK 3 B33 (A**2) : -0.45000 REMARK 3 B12 (A**2) : 0.15000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.383 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.278 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.202 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.627 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.920 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.888 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3212 ; 0.060 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4406 ; 3.182 ; 2.103 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 363 ; 8.312 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 506 ; 0.213 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2265 ; 0.014 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1457 ; 0.301 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 181 ; 0.228 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 23 ; 0.407 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.516 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1829 ; 2.018 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2942 ; 3.370 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1383 ; 4.239 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1464 ; 5.852 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 26 A 37 REMARK 3 RESIDUE RANGE : A 99 A 224 REMARK 3 ORIGIN FOR THE GROUP (A): 16.6535 16.5701 6.0722 REMARK 3 T TENSOR REMARK 3 T11: 0.5742 T22: 0.5259 REMARK 3 T33: 0.4667 T12: 0.0123 REMARK 3 T13: -0.0242 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 0.3643 L22: 0.6072 REMARK 3 L33: 1.8352 L12: -0.0330 REMARK 3 L13: 0.1754 L23: 0.3808 REMARK 3 S TENSOR REMARK 3 S11: 0.0177 S12: 0.0127 S13: 0.0445 REMARK 3 S21: -0.0502 S22: -0.1037 S23: 0.0518 REMARK 3 S31: 0.0518 S32: 0.1703 S33: 0.0860 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 38 A 98 REMARK 3 ORIGIN FOR THE GROUP (A): -4.5340 15.7996 23.9983 REMARK 3 T TENSOR REMARK 3 T11: 0.5604 T22: 0.5295 REMARK 3 T33: 0.6514 T12: -0.1560 REMARK 3 T13: 0.1208 T23: -0.1765 REMARK 3 L TENSOR REMARK 3 L11: 4.5064 L22: 6.1221 REMARK 3 L33: 4.0913 L12: -1.9551 REMARK 3 L13: -1.3465 L23: 1.8443 REMARK 3 S TENSOR REMARK 3 S11: 0.1735 S12: 0.1731 S13: -0.2154 REMARK 3 S21: 0.6094 S22: -0.6308 S23: 1.2469 REMARK 3 S31: 0.5297 S32: -0.3779 S33: 0.4573 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 225 A 287 REMARK 3 ORIGIN FOR THE GROUP (A): 0.7931 35.4412 -3.1754 REMARK 3 T TENSOR REMARK 3 T11: 0.5266 T22: 0.4210 REMARK 3 T33: 0.6746 T12: 0.0238 REMARK 3 T13: -0.1939 T23: -0.0319 REMARK 3 L TENSOR REMARK 3 L11: 3.4874 L22: 2.0662 REMARK 3 L33: 2.6934 L12: -0.9421 REMARK 3 L13: 1.6101 L23: 0.4833 REMARK 3 S TENSOR REMARK 3 S11: -0.3962 S12: 0.0698 S13: 0.7969 REMARK 3 S21: -0.0680 S22: -0.2220 S23: -0.0193 REMARK 3 S31: -0.0599 S32: -0.1183 S33: 0.6182 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 298 A 414 REMARK 3 ORIGIN FOR THE GROUP (A): 8.3806 40.7811 33.4158 REMARK 3 T TENSOR REMARK 3 T11: 0.9025 T22: 0.2743 REMARK 3 T33: 0.4719 T12: -0.3572 REMARK 3 T13: 0.3822 T23: -0.3543 REMARK 3 L TENSOR REMARK 3 L11: 3.5918 L22: 11.4552 REMARK 3 L33: 3.8706 L12: 4.1711 REMARK 3 L13: -0.3387 L23: 1.0794 REMARK 3 S TENSOR REMARK 3 S11: 1.3307 S12: 0.0671 S13: 0.6672 REMARK 3 S21: 2.0038 S22: -0.9993 S23: 0.9986 REMARK 3 S31: 0.0157 S32: 0.4902 S33: -0.3314 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : T 839 T 847 REMARK 3 RESIDUE RANGE : P 867 P 873 REMARK 3 ORIGIN FOR THE GROUP (A): 5.2689 37.9597 17.2810 REMARK 3 T TENSOR REMARK 3 T11: 0.5529 T22: 0.4595 REMARK 3 T33: 0.8100 T12: -0.1144 REMARK 3 T13: -0.0143 T23: -0.0604 REMARK 3 L TENSOR REMARK 3 L11: 0.6278 L22: 1.3499 REMARK 3 L33: 0.6126 L12: -0.6838 REMARK 3 L13: -0.0701 L23: 0.9646 REMARK 3 S TENSOR REMARK 3 S11: -0.0737 S12: 0.0176 S13: 0.9275 REMARK 3 S21: 0.0805 S22: -0.0423 S23: 0.6127 REMARK 3 S31: 0.0424 S32: 0.0836 S33: 0.1160 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CNS 1.1 WAS ALSO USED FOR REFINEMENT. REMARK 4 REMARK 4 2FLP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-FEB-06. REMARK 100 THE RCSB ID CODE IS RCSB036028. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22540 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 10.300 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB CODE ALZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.5, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 134.99800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 67.49900 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 101.24850 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 33.74950 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 168.74750 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 134.99800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 67.49900 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 33.74950 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 101.24850 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 168.74750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: T, P, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 49.18350 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 85.18832 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 33.74950 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DT T 837 REMARK 465 DC T 838 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 LEU A 3 REMARK 465 ALA A 4 REMARK 465 ASP A 5 REMARK 465 VAL A 6 REMARK 465 GLY A 7 REMARK 465 ALA A 8 REMARK 465 ALA A 9 REMARK 465 ALA A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLN A 13 REMARK 465 GLY A 14 REMARK 465 VAL A 15 REMARK 465 HIS A 16 REMARK 465 ASP A 17 REMARK 465 GLN A 18 REMARK 465 VAL A 19 REMARK 465 LEU A 20 REMARK 465 PRO A 21 REMARK 465 THR A 22 REMARK 465 PRO A 23 REMARK 465 ASN A 24 REMARK 465 ALA A 25 REMARK 465 SER A 350 REMARK 465 SER A 351 REMARK 465 GLU A 352 REMARK 465 LYS A 353 REMARK 465 HIS A 354 REMARK 465 LYS A 371 REMARK 465 LEU A 372 REMARK 465 GLY A 373 REMARK 465 THR A 374 REMARK 465 GLY A 375 REMARK 465 ASN A 376 REMARK 465 TYR A 377 REMARK 465 ASP A 378 REMARK 465 VAL A 395 REMARK 465 ASN A 396 REMARK 465 VAL A 397 REMARK 465 LYS A 398 REMARK 465 MET A 399 REMARK 465 PRO A 400 REMARK 465 PHE A 401 REMARK 465 HIS A 402 REMARK 465 LEU A 403 REMARK 465 ALA A 415 REMARK 465 LEU A 416 REMARK 465 ASN A 417 REMARK 465 THR A 418 REMARK 465 ALA A 419 REMARK 465 LYS A 420 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DT T 839 P OP1 OP2 REMARK 470 LYS A 51 CG CD CE NZ REMARK 470 ASP A 52 CG OD1 OD2 REMARK 470 LYS A 53 CG CD CE NZ REMARK 470 TYR A 61 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 72 CG CD CE NZ REMARK 470 LYS A 77 CG CD CE NZ REMARK 470 VAL A 81 CG1 CG2 REMARK 470 ASP A 83 CG OD1 OD2 REMARK 470 ASP A 146 CG OD1 OD2 REMARK 470 LYS A 245 CG CD CE NZ REMARK 470 LYS A 271 CG CD CE NZ REMARK 470 LYS A 310 CG CD CE NZ REMARK 470 VAL A 315 CG1 CG2 REMARK 470 GLU A 316 CG CD OE1 OE2 REMARK 470 LYS A 338 CG CD CE NZ REMARK 470 TYR A 349 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR A 355 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL A 379 CG1 CG2 REMARK 470 ASP A 385 CG OD1 OD2 REMARK 470 ILE A 386 CG1 CG2 CD1 REMARK 470 LYS A 389 CG CD CE NZ REMARK 470 LEU A 405 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O MET A 388 NH1 ARG A 392 1.72 REMARK 500 O TYR A 158 O HOH A 999 1.87 REMARK 500 O PRO A 292 O HOH A 929 2.00 REMARK 500 ND2 ASN A 290 O HOH A 905 2.14 REMARK 500 OE1 GLN A 361 O HOH A 946 2.18 REMARK 500 O HOH A 914 O HOH A 965 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O3' DT T 847 O5' DA P 867 10665 1.55 REMARK 500 O3' DT T 847 C5' DA P 867 10665 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DT T 839 C5' DT T 839 C4' 0.071 REMARK 500 DT T 839 C1' DT T 839 N1 0.103 REMARK 500 DT T 839 N1 DT T 839 C2 0.066 REMARK 500 DG T 840 C2 DG T 840 N3 0.053 REMARK 500 DG T 841 C2 DG T 841 N3 0.063 REMARK 500 DG T 842 P DG T 842 O5' 0.071 REMARK 500 DG T 842 O3' DG T 842 C3' -0.039 REMARK 500 DG T 842 N3 DG T 842 C4 -0.060 REMARK 500 DG T 842 C5 DG T 842 N7 0.046 REMARK 500 DG T 843 C2 DG T 843 N3 0.072 REMARK 500 DT T 844 P DT T 844 O5' 0.085 REMARK 500 DT T 844 O3' DT T 844 C3' -0.052 REMARK 500 DT T 844 C5 DT T 844 C7 0.065 REMARK 500 DC T 845 N1 DC T 845 C6 0.045 REMARK 500 DC T 845 C4 DC T 845 C5 0.069 REMARK 500 DC T 845 C5 DC T 845 C6 0.054 REMARK 500 DT T 847 C5' DT T 847 C4' 0.053 REMARK 500 DT T 847 C4' DT T 847 C3' 0.061 REMARK 500 DT T 847 C3' DT T 847 C2' 0.080 REMARK 500 DT T 847 C2' DT T 847 C1' 0.081 REMARK 500 DT T 847 O3' DT T 847 C3' 0.227 REMARK 500 DT T 847 C1' DT T 847 N1 0.139 REMARK 500 DT T 847 C5 DT T 847 C7 0.073 REMARK 500 DG P 869 P DG P 869 O5' 0.064 REMARK 500 DG P 869 C4 DG P 869 C5 0.053 REMARK 500 DG P 869 C5 DG P 869 N7 0.037 REMARK 500 DA P 870 C2 DA P 870 N3 0.091 REMARK 500 DC P 871 C2' DC P 871 C1' 0.086 REMARK 500 DC P 871 O3' DC P 871 C3' -0.122 REMARK 500 DC P 872 P DC P 872 O5' 0.065 REMARK 500 VAL A 31 CB VAL A 31 CG2 0.165 REMARK 500 TYR A 39 CG TYR A 39 CD1 -0.089 REMARK 500 TYR A 68 CG TYR A 68 CD1 0.098 REMARK 500 TYR A 102 CG TYR A 102 CD2 0.085 REMARK 500 ARG A 103 CZ ARG A 103 NH2 0.097 REMARK 500 GLU A 104 CD GLU A 104 OE2 0.077 REMARK 500 LYS A 108 CD LYS A 108 CE 0.160 REMARK 500 GLU A 111 CD GLU A 111 OE2 0.069 REMARK 500 SER A 117 CB SER A 117 OG 0.081 REMARK 500 GLU A 121 CG GLU A 121 CD 0.104 REMARK 500 ARG A 122 CD ARG A 122 NE -0.112 REMARK 500 GLU A 134 CG GLU A 134 CD 0.092 REMARK 500 GLU A 134 CD GLU A 134 OE1 0.069 REMARK 500 SER A 177 CB SER A 177 OG 0.082 REMARK 500 ARG A 184 CD ARG A 184 NE -0.112 REMARK 500 GLU A 185 CD GLU A 185 OE1 0.080 REMARK 500 GLU A 185 CD GLU A 185 OE2 0.131 REMARK 500 TYR A 188 CG TYR A 188 CD2 0.083 REMARK 500 LYS A 214 CA LYS A 214 C -0.173 REMARK 500 ASN A 216 N ASN A 216 CA 0.191 REMARK 500 REMARK 500 THIS ENTRY HAS 107 BOND DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT T 839 N1 - C1' - C2' ANGL. DEV. = 8.7 DEGREES REMARK 500 DT T 839 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DT T 839 N1 - C2 - O2 ANGL. DEV. = 5.2 DEGREES REMARK 500 DT T 839 N3 - C2 - O2 ANGL. DEV. = -4.9 DEGREES REMARK 500 DT T 839 N3 - C4 - O4 ANGL. DEV. = 7.3 DEGREES REMARK 500 DT T 839 C5 - C4 - O4 ANGL. DEV. = -6.1 DEGREES REMARK 500 DT T 839 C6 - N1 - C1' ANGL. DEV. = -10.6 DEGREES REMARK 500 DT T 839 C2 - N1 - C1' ANGL. DEV. = 13.3 DEGREES REMARK 500 DG T 840 C5' - C4' - C3' ANGL. DEV. = -18.0 DEGREES REMARK 500 DG T 840 C5' - C4' - O4' ANGL. DEV. = 10.0 DEGREES REMARK 500 DG T 840 C6 - N1 - C2 ANGL. DEV. = -4.2 DEGREES REMARK 500 DG T 840 C2 - N3 - C4 ANGL. DEV. = 3.4 DEGREES REMARK 500 DG T 840 C5 - C6 - N1 ANGL. DEV. = 4.0 DEGREES REMARK 500 DT T 839 C3' - O3' - P ANGL. DEV. = 9.4 DEGREES REMARK 500 DG T 841 C3' - C2' - C1' ANGL. DEV. = -4.8 DEGREES REMARK 500 DG T 841 C6 - N1 - C2 ANGL. DEV. = -4.2 DEGREES REMARK 500 DG T 842 C1' - O4' - C4' ANGL. DEV. = 4.6 DEGREES REMARK 500 DG T 843 O4' - C4' - C3' ANGL. DEV. = 6.3 DEGREES REMARK 500 DG T 843 C4' - C3' - C2' ANGL. DEV. = -5.3 DEGREES REMARK 500 DG T 843 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 DG T 843 C5 - C6 - N1 ANGL. DEV. = 3.1 DEGREES REMARK 500 DG T 843 N1 - C6 - O6 ANGL. DEV. = -3.7 DEGREES REMARK 500 DT T 844 O4' - C4' - C3' ANGL. DEV. = 3.7 DEGREES REMARK 500 DT T 844 C1' - O4' - C4' ANGL. DEV. = -6.5 DEGREES REMARK 500 DT T 844 C4 - C5 - C6 ANGL. DEV. = -5.5 DEGREES REMARK 500 DT T 844 N3 - C4 - O4 ANGL. DEV. = -5.4 DEGREES REMARK 500 DT T 844 C4 - C5 - C7 ANGL. DEV. = 10.9 DEGREES REMARK 500 DT T 844 C6 - C5 - C7 ANGL. DEV. = -5.3 DEGREES REMARK 500 DC T 845 C4 - C5 - C6 ANGL. DEV. = -3.1 DEGREES REMARK 500 DC T 845 N3 - C4 - N4 ANGL. DEV. = -4.9 DEGREES REMARK 500 DT T 844 C3' - O3' - P ANGL. DEV. = -8.1 DEGREES REMARK 500 DC T 846 C6 - N1 - C2 ANGL. DEV. = -2.8 DEGREES REMARK 500 DC T 846 O3' - P - OP2 ANGL. DEV. = 8.4 DEGREES REMARK 500 DC T 846 O3' - P - OP1 ANGL. DEV. = -15.8 DEGREES REMARK 500 DT T 847 O4' - C4' - C3' ANGL. DEV. = 6.1 DEGREES REMARK 500 DT T 847 C4' - C3' - O3' ANGL. DEV. = 15.8 DEGREES REMARK 500 DT T 847 O4' - C1' - C2' ANGL. DEV. = 5.1 DEGREES REMARK 500 DT T 847 N3 - C4 - C5 ANGL. DEV. = 6.7 DEGREES REMARK 500 DT T 847 C4 - C5 - C6 ANGL. DEV. = -7.5 DEGREES REMARK 500 DT T 847 N3 - C4 - O4 ANGL. DEV. = -4.2 DEGREES REMARK 500 DT T 847 C6 - C5 - C7 ANGL. DEV. = 4.2 DEGREES REMARK 500 DA P 867 O4' - C4' - C3' ANGL. DEV. = -4.2 DEGREES REMARK 500 DA P 867 C1' - O4' - C4' ANGL. DEV. = 7.3 DEGREES REMARK 500 DA P 867 O4' - C1' - N9 ANGL. DEV. = 10.4 DEGREES REMARK 500 DA P 867 C6 - N1 - C2 ANGL. DEV. = -3.9 DEGREES REMARK 500 DA P 867 C5 - C6 - N1 ANGL. DEV. = 4.6 DEGREES REMARK 500 DA P 867 N7 - C8 - N9 ANGL. DEV. = 3.1 DEGREES REMARK 500 DA P 867 C8 - N9 - C4 ANGL. DEV. = -3.6 DEGREES REMARK 500 DA P 867 N1 - C6 - N6 ANGL. DEV. = -3.8 DEGREES REMARK 500 DG P 868 C5' - C4' - O4' ANGL. DEV. = 6.8 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 85 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 37 59.73 22.71 REMARK 500 LYS A 60 -122.78 42.06 REMARK 500 LEU A 73 37.68 -88.82 REMARK 500 LYS A 77 -99.01 21.45 REMARK 500 VAL A 81 5.33 -64.65 REMARK 500 ARG A 82 -57.85 -133.36 REMARK 500 CYS A 88 98.25 -169.95 REMARK 500 GLN A 90 31.99 -74.14 REMARK 500 SER A 145 86.31 -49.22 REMARK 500 ASP A 146 -77.03 168.43 REMARK 500 LEU A 165 -8.63 -55.58 REMARK 500 PRO A 215 -76.50 -70.34 REMARK 500 GLU A 272 -22.42 -143.53 REMARK 500 ASP A 289 106.51 -168.23 REMARK 500 PHE A 308 110.67 175.40 REMARK 500 LYS A 310 -35.34 81.97 REMARK 500 GLU A 314 -141.60 177.43 REMARK 500 VAL A 315 -44.29 -27.76 REMARK 500 ALA A 317 44.48 -89.57 REMARK 500 CYS A 333 -85.70 -45.25 REMARK 500 GLN A 334 -55.74 -10.95 REMARK 500 ARG A 337 142.29 -31.92 REMARK 500 PRO A 365 95.66 -55.52 REMARK 500 SER A 366 -73.51 13.00 REMARK 500 THR A 381 -87.17 -15.02 REMARK 500 ASN A 393 -15.44 -39.23 REMARK 500 LEU A 405 149.20 154.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE A 213 LYS A 214 -134.64 REMARK 500 GLU A 305 ASP A 306 149.50 REMARK 500 MET A 388 LYS A 389 142.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DG T 843 0.05 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 TYR A 68 22.2 L L OUTSIDE RANGE REMARK 500 TYR A 158 24.1 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1001 DISTANCE = 5.74 ANGSTROMS REMARK 525 HOH A1022 DISTANCE = 5.20 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1T3N RELATED DB: PDB REMARK 900 TERNARY COMPLEX OF CATALYTIC CORE OF HUMAN DNA POLYMERASE REMARK 900 IOTA WITH DNA AND DTTP REMARK 900 RELATED ID: 2ALZ RELATED DB: PDB REMARK 900 TERNARY COMPLEX OF CATALYTIC CORE OF HUMAN DNA POLYMERASE REMARK 900 IOTA WITH DNA AND DCTP REMARK 900 RELATED ID: 2FLN RELATED DB: PDB REMARK 900 BINARY COMPLEX OF CATALYTIC CORE OF HUMAN DNA POLYMERASE REMARK 900 IOTA WITH DNA (TEMPLATE A) REMARK 900 RELATED ID: 2FLL RELATED DB: PDB REMARK 900 TERNARY COMPLEX OF CATALYTIC CORE OF HUMAN DNA POLYMERASE REMARK 900 IOTA WITH DNA AND DTTP (P6522) DBREF 2FLP A 1 420 UNP Q9UNA4 POLI_HUMAN 1 420 DBREF 2FLP T 837 847 PDB 2FLP 2FLP 837 847 DBREF 2FLP P 867 873 PDB 2FLP 2FLP 867 873 SEQRES 1 T 11 DT DC DT DG DG DG DG DT DC DC DT SEQRES 1 P 7 DA DG DG DA DC DC DOC SEQRES 1 A 420 MET GLU LEU ALA ASP VAL GLY ALA ALA ALA SER SER GLN SEQRES 2 A 420 GLY VAL HIS ASP GLN VAL LEU PRO THR PRO ASN ALA SER SEQRES 3 A 420 SER ARG VAL ILE VAL HIS VAL ASP LEU ASP CYS PHE TYR SEQRES 4 A 420 ALA GLN VAL GLU MET ILE SER ASN PRO GLU LEU LYS ASP SEQRES 5 A 420 LYS PRO LEU GLY VAL GLN GLN LYS TYR LEU VAL VAL THR SEQRES 6 A 420 CYS ASN TYR GLU ALA ARG LYS LEU GLY VAL LYS LYS LEU SEQRES 7 A 420 MET ASN VAL ARG ASP ALA LYS GLU LYS CYS PRO GLN LEU SEQRES 8 A 420 VAL LEU VAL ASN GLY GLU ASP LEU THR ARG TYR ARG GLU SEQRES 9 A 420 MET SER TYR LYS VAL THR GLU LEU LEU GLU GLU PHE SER SEQRES 10 A 420 PRO VAL VAL GLU ARG LEU GLY PHE ASP GLU ASN PHE VAL SEQRES 11 A 420 ASP LEU THR GLU MET VAL GLU LYS ARG LEU GLN GLN LEU SEQRES 12 A 420 GLN SER ASP GLU LEU SER ALA VAL THR VAL SER GLY HIS SEQRES 13 A 420 VAL TYR ASN ASN GLN SER ILE ASN LEU LEU ASP VAL LEU SEQRES 14 A 420 HIS ILE ARG LEU LEU VAL GLY SER GLN ILE ALA ALA GLU SEQRES 15 A 420 MET ARG GLU ALA MET TYR ASN GLN LEU GLY LEU THR GLY SEQRES 16 A 420 CYS ALA GLY VAL ALA SER ASN LYS LEU LEU ALA LYS LEU SEQRES 17 A 420 VAL SER GLY VAL PHE LYS PRO ASN GLN GLN THR VAL LEU SEQRES 18 A 420 LEU PRO GLU SER CYS GLN HIS LEU ILE HIS SER LEU ASN SEQRES 19 A 420 HIS ILE LYS GLU ILE PRO GLY ILE GLY TYR LYS THR ALA SEQRES 20 A 420 LYS CYS LEU GLU ALA LEU GLY ILE ASN SER VAL ARG ASP SEQRES 21 A 420 LEU GLN THR PHE SER PRO LYS ILE LEU GLU LYS GLU LEU SEQRES 22 A 420 GLY ILE SER VAL ALA GLN ARG ILE GLN LYS LEU SER PHE SEQRES 23 A 420 GLY GLU ASP ASN SER PRO VAL ILE LEU SER GLY PRO PRO SEQRES 24 A 420 GLN SER PHE SER GLU GLU ASP SER PHE LYS LYS CYS SER SEQRES 25 A 420 SER GLU VAL GLU ALA LYS ASN LYS ILE GLU GLU LEU LEU SEQRES 26 A 420 ALA SER LEU LEU ASN ARG VAL CYS GLN ASP GLY ARG LYS SEQRES 27 A 420 PRO HIS THR VAL ARG LEU ILE ILE ARG ARG TYR SER SER SEQRES 28 A 420 GLU LYS HIS TYR GLY ARG GLU SER ARG GLN CYS PRO ILE SEQRES 29 A 420 PRO SER HIS VAL ILE GLN LYS LEU GLY THR GLY ASN TYR SEQRES 30 A 420 ASP VAL MET THR PRO MET VAL ASP ILE LEU MET LYS LEU SEQRES 31 A 420 PHE ARG ASN MET VAL ASN VAL LYS MET PRO PHE HIS LEU SEQRES 32 A 420 THR LEU LEU SER VAL CYS PHE CYS ASN LEU LYS ALA LEU SEQRES 33 A 420 ASN THR ALA LYS MODRES 2FLP DOC P 873 DC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE HET DOC P 873 18 HETNAM DOC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE FORMUL 2 DOC C9 H14 N3 O6 P FORMUL 4 HOH *115(H2 O) HELIX 1 1 CYS A 37 ASN A 47 1 11 HELIX 2 2 PRO A 48 LYS A 51 5 4 HELIX 3 3 ASN A 67 LEU A 73 1 7 HELIX 4 4 LEU A 99 SER A 117 1 19 HELIX 5 5 LEU A 132 GLN A 141 1 10 HELIX 6 6 ASP A 146 VAL A 151 5 6 HELIX 7 7 ASP A 167 GLY A 192 1 26 HELIX 8 8 ASN A 202 GLY A 211 1 10 HELIX 9 9 LEU A 222 GLU A 224 5 3 HELIX 10 10 SER A 225 LEU A 233 1 9 HELIX 11 11 HIS A 235 ILE A 239 5 5 HELIX 12 12 GLY A 243 LEU A 253 1 11 HELIX 13 13 SER A 257 PHE A 264 1 8 HELIX 14 14 SER A 265 PHE A 286 1 22 HELIX 15 15 GLU A 314 ALA A 317 5 4 HELIX 16 16 LYS A 318 GLY A 336 1 19 HELIX 17 17 PRO A 365 GLN A 370 1 6 HELIX 18 18 MET A 380 ASN A 393 1 14 SHEET 1 A 6 VAL A 120 LEU A 123 0 SHEET 2 A 6 GLU A 127 ASP A 131 -1 O PHE A 129 N GLU A 121 SHEET 3 A 6 ILE A 30 LEU A 35 -1 N VAL A 33 O ASN A 128 SHEET 4 A 6 GLY A 195 ALA A 200 -1 O CYS A 196 N ASP A 34 SHEET 5 A 6 GLN A 218 VAL A 220 1 O THR A 219 N VAL A 199 SHEET 6 A 6 HIS A 156 VAL A 157 1 N HIS A 156 O GLN A 218 SHEET 1 B 4 MET A 79 ASN A 80 0 SHEET 2 B 4 LEU A 62 CYS A 66 -1 N VAL A 63 O MET A 79 SHEET 3 B 4 LEU A 55 GLN A 59 -1 N GLN A 59 O LEU A 62 SHEET 4 B 4 VAL A 92 ASN A 95 1 O VAL A 94 N GLN A 58 SHEET 1 C 4 SER A 301 SER A 307 0 SHEET 2 C 4 LEU A 405 LYS A 414 -1 O LEU A 406 N ASP A 306 SHEET 3 C 4 LYS A 338 ILE A 346 -1 N ILE A 345 O SER A 407 SHEET 4 C 4 GLU A 358 PRO A 363 -1 O CYS A 362 N VAL A 342 LINK O3' DC P 872 P DOC P 873 1555 1555 1.52 CRYST1 98.367 98.367 202.497 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010166 0.005869 0.000000 0.00000 SCALE2 0.000000 0.011739 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004938 0.00000 MASTER 741 0 1 18 14 0 0 6 0 0 0 35 END