HEADER TRANSPORT PROTEIN 03-JAN-06 2FJY TITLE CRYSTAL STRUCTURE OF B-FORM BOMBYX MORI PHEROMONE BINDING PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHEROMONE-BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PBP; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOMBYX MORI; SOURCE 3 ORGANISM_COMMON: DOMESTIC SILKWORM; SOURCE 4 ORGANISM_TAXID: 7091; SOURCE 5 GENE: PBP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS ALPHA HELICAL, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.LAUTENSCHLAGER,W.S.LEAL,J.CLARDY REVDAT 3 18-OCT-17 2FJY 1 REMARK REVDAT 2 24-FEB-09 2FJY 1 VERSN REVDAT 1 17-JAN-06 2FJY 0 JRNL AUTH C.LAUTENSCHLAGER,W.S.LEAL,J.CLARDY JRNL TITL COIL-TO-HELIX TRANSITION AND LIGAND RELEASE OF BOMBYX MORI JRNL TITL 2 PHEROMONE-BINDING PROTEIN. JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 335 1044 2005 JRNL REFN ISSN 0006-291X JRNL PMID 16111659 JRNL DOI 10.1016/J.BBRC.2005.07.176 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.9 REMARK 3 NUMBER OF REFLECTIONS : 12080 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 605 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 790 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2300 REMARK 3 BIN FREE R VALUE SET COUNT : 42 REMARK 3 BIN FREE R VALUE : 0.3340 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2166 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 95 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.23000 REMARK 3 B22 (A**2) : 2.59000 REMARK 3 B33 (A**2) : -2.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.514 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.290 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.182 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.617 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2212 ; 0.048 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1922 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2985 ; 2.533 ; 1.946 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4528 ; 1.133 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 276 ; 5.562 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 327 ; 0.174 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2458 ; 0.015 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 394 ; 0.013 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 583 ; 0.231 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2147 ; 0.250 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1227 ; 0.098 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 75 ; 0.180 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 30 ; 0.314 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 79 ; 0.365 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.216 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1378 ; 2.324 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2201 ; 4.414 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 834 ; 5.153 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 784 ; 8.050 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2FJY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JAN-06. REMARK 100 THE DEPOSITION ID IS D_1000035966. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUN-02 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.950 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12094 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 43.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1GM0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NAF, PEG 3350, PH 7.5, HANGING DROP, REMARK 280 TEMPERATURE 277K, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.12000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.74500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.39500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.74500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.12000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.39500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A MONOMER. THERE ARE 2 BIOLOGICAL REMARK 300 UNITS IN THE ASYMMETRIC UNIT (CHAINS A & B), WHICH ARE SEPARATED BY REMARK 300 A TRANSLATION OF 0.497 ALONG THE B-AXIS AND 0.051 ALONG THE C-AXIS. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 GLN A 2 REMARK 465 GLU A 3 REMARK 465 VAL A 4 REMARK 465 MET A 5 REMARK 465 LYS A 6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MET A 23 CG MET A 23 SD -0.205 REMARK 500 GLU A 31 CD GLU A 31 OE1 0.106 REMARK 500 TYR A 41 CE1 TYR A 41 CZ -0.089 REMARK 500 LYS A 44 CB LYS A 44 CG 0.195 REMARK 500 ARG A 46 CG ARG A 46 CD 0.188 REMARK 500 ARG A 46 CZ ARG A 46 NH2 0.079 REMARK 500 ASP A 63 CB ASP A 63 CG 0.306 REMARK 500 GLN A 89 CG GLN A 89 CD 0.234 REMARK 500 LYS A 124 CE LYS A 124 NZ 0.185 REMARK 500 VAL A 142 CB VAL A 142 CG1 -0.138 REMARK 500 GLN B 2 CB GLN B 2 CG 0.167 REMARK 500 VAL B 4 CA VAL B 4 CB 0.133 REMARK 500 GLU B 18 CD GLU B 18 OE1 -0.093 REMARK 500 GLU B 22 CD GLU B 22 OE2 0.093 REMARK 500 GLU B 31 CD GLU B 31 OE1 0.071 REMARK 500 GLU B 39 CB GLU B 39 CG 0.123 REMARK 500 GLU B 39 CG GLU B 39 CD 0.144 REMARK 500 TYR B 41 CZ TYR B 41 OH 0.114 REMARK 500 GLU B 42 CG GLU B 42 CD 0.107 REMARK 500 LYS B 44 CB LYS B 44 CG 0.168 REMARK 500 MET B 61 SD MET B 61 CE -0.471 REMARK 500 ASP B 63 CB ASP B 63 CG 0.282 REMARK 500 ALA B 77 CA ALA B 77 CB 0.171 REMARK 500 LYS B 78 CD LYS B 78 CE 0.163 REMARK 500 LYS B 79 CD LYS B 79 CE 0.187 REMARK 500 GLN B 89 CG GLN B 89 CD 0.209 REMARK 500 GLN B 89 CD GLN B 89 NE2 0.200 REMARK 500 LYS B 107 CD LYS B 107 CE 0.230 REMARK 500 LYS B 107 CE LYS B 107 NZ 0.265 REMARK 500 ALA B 128 CA ALA B 128 CB 0.128 REMARK 500 VAL B 142 CB VAL B 142 CG1 -0.159 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 8 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 GLU A 31 OE1 - CD - OE2 ANGL. DEV. = 10.1 DEGREES REMARK 500 ARG A 46 NE - CZ - NH2 ANGL. DEV. = 4.7 DEGREES REMARK 500 ASP A 83 CB - CG - OD2 ANGL. DEV. = 6.7 DEGREES REMARK 500 ASP A 92 CB - CG - OD1 ANGL. DEV. = 8.7 DEGREES REMARK 500 ASP A 106 CB - CG - OD2 ANGL. DEV. = 7.5 DEGREES REMARK 500 MET A 131 CG - SD - CE ANGL. DEV. = 9.9 DEGREES REMARK 500 ASP B 17 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 GLU B 39 OE1 - CD - OE2 ANGL. DEV. = -10.8 DEGREES REMARK 500 ARG B 46 NE - CZ - NH2 ANGL. DEV. = 4.9 DEGREES REMARK 500 ASP B 63 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP B 92 CB - CG - OD2 ANGL. DEV. = 8.3 DEGREES REMARK 500 ASP B 106 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 MET B 131 CG - SD - CE ANGL. DEV. = 10.6 DEGREES REMARK 500 ASP B 132 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 VAL B 133 CB - CA - C ANGL. DEV. = -13.2 DEGREES REMARK 500 VAL B 135 CG1 - CB - CG2 ANGL. DEV. = -10.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 8 63.91 63.50 REMARK 500 THR A 24 66.62 35.18 REMARK 500 ASN A 72 74.37 -157.50 REMARK 500 ASN A 104 127.40 -173.51 REMARK 500 GLU B 3 -126.05 -146.04 REMARK 500 VAL B 4 60.87 28.40 REMARK 500 LYS B 6 174.66 -42.10 REMARK 500 ASN B 7 94.73 -58.59 REMARK 500 LEU B 8 53.41 105.26 REMARK 500 THR B 24 61.44 37.94 REMARK 500 ASN B 72 74.61 -156.60 REMARK 500 ASP B 83 -167.78 -77.19 REMARK 500 ASN B 104 122.27 -174.46 REMARK 500 REMARK 500 REMARK: NULL DBREF 2FJY A 1 142 UNP P34174 PBP_BOMMO 23 164 DBREF 2FJY B 1 142 UNP P34174 PBP_BOMMO 23 164 SEQRES 1 A 142 SER GLN GLU VAL MET LYS ASN LEU SER LEU ASN PHE GLY SEQRES 2 A 142 LYS ALA LEU ASP GLU CYS LYS LYS GLU MET THR LEU THR SEQRES 3 A 142 ASP ALA ILE ASN GLU ASP PHE TYR ASN PHE TRP LYS GLU SEQRES 4 A 142 GLY TYR GLU ILE LYS ASN ARG GLU THR GLY CYS ALA ILE SEQRES 5 A 142 MET CYS LEU SER THR LYS LEU ASN MET LEU ASP PRO GLU SEQRES 6 A 142 GLY ASN LEU HIS HIS GLY ASN ALA MET GLU PHE ALA LYS SEQRES 7 A 142 LYS HIS GLY ALA ASP GLU THR MET ALA GLN GLN LEU ILE SEQRES 8 A 142 ASP ILE VAL HIS GLY CYS GLU LYS SER THR PRO ALA ASN SEQRES 9 A 142 ASP ASP LYS CYS ILE TRP THR LEU GLY VAL ALA THR CYS SEQRES 10 A 142 PHE LYS ALA GLU ILE HIS LYS LEU ASN TRP ALA PRO SER SEQRES 11 A 142 MET ASP VAL ALA VAL GLY GLU ILE LEU ALA GLU VAL SEQRES 1 B 142 SER GLN GLU VAL MET LYS ASN LEU SER LEU ASN PHE GLY SEQRES 2 B 142 LYS ALA LEU ASP GLU CYS LYS LYS GLU MET THR LEU THR SEQRES 3 B 142 ASP ALA ILE ASN GLU ASP PHE TYR ASN PHE TRP LYS GLU SEQRES 4 B 142 GLY TYR GLU ILE LYS ASN ARG GLU THR GLY CYS ALA ILE SEQRES 5 B 142 MET CYS LEU SER THR LYS LEU ASN MET LEU ASP PRO GLU SEQRES 6 B 142 GLY ASN LEU HIS HIS GLY ASN ALA MET GLU PHE ALA LYS SEQRES 7 B 142 LYS HIS GLY ALA ASP GLU THR MET ALA GLN GLN LEU ILE SEQRES 8 B 142 ASP ILE VAL HIS GLY CYS GLU LYS SER THR PRO ALA ASN SEQRES 9 B 142 ASP ASP LYS CYS ILE TRP THR LEU GLY VAL ALA THR CYS SEQRES 10 B 142 PHE LYS ALA GLU ILE HIS LYS LEU ASN TRP ALA PRO SER SEQRES 11 B 142 MET ASP VAL ALA VAL GLY GLU ILE LEU ALA GLU VAL FORMUL 3 HOH *95(H2 O) HELIX 1 1 PHE A 12 MET A 23 1 12 HELIX 2 2 ALA A 28 PHE A 36 1 9 HELIX 3 3 ASN A 45 SER A 56 1 12 HELIX 4 4 THR A 57 LEU A 62 5 6 HELIX 5 5 ALA A 73 LYS A 79 1 7 HELIX 6 6 ASP A 83 THR A 101 1 19 HELIX 7 7 ASP A 106 HIS A 123 1 18 HELIX 8 8 SER A 130 VAL A 142 1 13 HELIX 9 9 PHE B 12 MET B 23 1 12 HELIX 10 10 ALA B 28 PHE B 36 1 9 HELIX 11 11 ASN B 45 SER B 56 1 12 HELIX 12 12 LYS B 58 ASP B 63 1 6 HELIX 13 13 ALA B 73 LYS B 79 1 7 HELIX 14 14 ASP B 83 THR B 101 1 19 HELIX 15 15 ASP B 106 HIS B 123 1 18 HELIX 16 16 SER B 130 VAL B 142 1 13 SSBOND 1 CYS A 19 CYS A 54 1555 1555 2.11 SSBOND 2 CYS A 50 CYS A 108 1555 1555 2.12 SSBOND 3 CYS A 97 CYS A 117 1555 1555 2.12 SSBOND 4 CYS B 19 CYS B 54 1555 1555 2.09 SSBOND 5 CYS B 50 CYS B 108 1555 1555 2.13 SSBOND 6 CYS B 97 CYS B 117 1555 1555 2.07 CRYST1 54.240 70.790 75.490 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018440 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014130 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013250 0.00000 MASTER 370 0 0 16 0 0 0 6 0 0 0 22 END