HEADER DNA BINDING PROTEIN 12-DEC-05 2FC7 TITLE SOLUTION STRUCTURE OF THE ZZ DOMAIN OF ZZZ3 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZZZ3 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ZZ DOMAIN, RESIDUES 8-76; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ZZZ3; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P050302-92; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS NMR, STRUCTURE GENOMICS, ZZ DOMAIN, ZZZ3 PROTEIN, KEYWDS 2 STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 3 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 4 GENOMICS/PROTEOMICS INITIATIVE, RSGI, DNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR W.DANG,Y.MUTO,M.INOUE,M.SHIROUZU,T.TERADA,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 2 24-FEB-09 2FC7 1 VERSN REVDAT 1 12-JUN-06 2FC7 0 JRNL AUTH W.DANG,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE ZZ DOMAIN OF ZZZ3 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT,P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2FC7 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-DEC-05. REMARK 100 THE RCSB ID CODE IS RCSB035705. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20MM D-TRIS-HCL(PH7.0); 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; REMARK 210 50UM ZNCL2+1MM IDA; 90% H2O, REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, NMRPIPE REMARK 210 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9321, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, REMARK 210 STRUCTURES WITH THE LOWEST REMARK 210 ENERGY,TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 3 129.03 -173.86 REMARK 500 1 GLN A 9 138.71 -172.03 REMARK 500 1 MET A 10 36.62 38.25 REMARK 500 1 ALA A 12 86.10 -67.05 REMARK 500 1 SER A 14 102.86 -35.16 REMARK 500 1 ASN A 26 -60.97 -120.44 REMARK 500 1 CYS A 42 152.14 -48.19 REMARK 500 1 ASP A 52 -35.69 -38.56 REMARK 500 1 HIS A 68 158.82 -47.54 REMARK 500 1 SER A 81 158.74 -41.78 REMARK 500 2 GLN A 9 43.55 36.13 REMARK 500 2 MET A 10 41.56 -102.71 REMARK 500 2 CYS A 42 151.11 -49.55 REMARK 500 2 ASP A 52 -32.93 -35.35 REMARK 500 2 SER A 77 43.75 -99.48 REMARK 500 2 PRO A 79 0.16 -69.77 REMARK 500 3 GLN A 9 41.68 37.40 REMARK 500 3 ALA A 12 108.33 -165.92 REMARK 500 3 SER A 14 126.54 -35.65 REMARK 500 3 TRP A 37 98.57 -67.47 REMARK 500 3 CYS A 42 152.29 -44.87 REMARK 500 3 ASP A 52 -28.75 -37.03 REMARK 500 4 MET A 10 96.37 -63.81 REMARK 500 4 TRP A 37 96.28 -67.33 REMARK 500 4 CYS A 42 151.44 -44.52 REMARK 500 4 ASP A 52 -33.46 -35.79 REMARK 500 4 HIS A 68 153.06 -46.48 REMARK 500 4 SER A 77 40.47 36.27 REMARK 500 5 TRP A 37 95.22 -65.78 REMARK 500 5 CYS A 42 152.89 -46.96 REMARK 500 5 ASP A 52 -34.34 -34.02 REMARK 500 5 PRO A 79 86.78 -69.77 REMARK 500 6 ASN A 26 -62.38 -128.79 REMARK 500 6 CYS A 42 150.63 -42.63 REMARK 500 6 ASP A 52 -37.18 -39.07 REMARK 500 6 HIS A 68 156.65 -46.89 REMARK 500 6 PRO A 72 99.60 -69.68 REMARK 500 7 MET A 10 118.68 -168.31 REMARK 500 7 PRO A 44 0.93 -69.80 REMARK 500 7 ASP A 52 -33.61 -35.10 REMARK 500 7 HIS A 68 151.99 -47.81 REMARK 500 8 SER A 3 44.10 -81.57 REMARK 500 8 ASN A 26 -63.97 -122.30 REMARK 500 8 ASP A 52 -37.17 -35.56 REMARK 500 8 HIS A 68 157.89 -41.76 REMARK 500 9 MET A 10 99.37 -35.96 REMARK 500 9 CYS A 42 150.90 -49.94 REMARK 500 9 PRO A 44 1.60 -69.78 REMARK 500 9 ASP A 52 -35.78 -35.63 REMARK 500 9 HIS A 68 161.28 -46.46 REMARK 500 10 SER A 6 114.82 -164.91 REMARK 500 10 TRP A 37 97.81 -68.62 REMARK 500 10 CYS A 42 153.86 -43.44 REMARK 500 10 ASP A 52 -34.21 -39.82 REMARK 500 10 HIS A 68 153.35 -46.21 REMARK 500 10 PRO A 72 99.84 -69.76 REMARK 500 10 SER A 80 41.03 -85.52 REMARK 500 10 SER A 81 43.93 -100.30 REMARK 500 11 SER A 3 150.66 -47.86 REMARK 500 11 ASN A 26 -69.19 -97.06 REMARK 500 11 PRO A 44 0.40 -69.80 REMARK 500 11 ASP A 52 -37.51 -38.51 REMARK 500 11 HIS A 68 155.68 -48.65 REMARK 500 12 TRP A 37 96.01 -66.79 REMARK 500 12 CYS A 42 151.63 -48.75 REMARK 500 12 ASP A 52 -33.78 -39.77 REMARK 500 12 HIS A 68 159.46 -43.19 REMARK 500 12 SER A 77 154.32 -38.34 REMARK 500 13 MET A 10 139.59 -171.27 REMARK 500 13 ASN A 26 -70.76 -97.83 REMARK 500 13 TRP A 37 95.38 -68.35 REMARK 500 13 CYS A 42 153.35 -45.00 REMARK 500 13 ASP A 52 -29.89 -38.25 REMARK 500 13 SER A 81 151.34 -41.77 REMARK 500 14 CYS A 42 152.31 -44.35 REMARK 500 14 ASP A 52 -35.71 -35.40 REMARK 500 14 HIS A 68 150.86 -47.59 REMARK 500 15 ALA A 12 110.01 -164.02 REMARK 500 15 TRP A 37 96.54 -67.96 REMARK 500 15 CYS A 42 150.83 -46.38 REMARK 500 15 ASP A 52 -35.83 -35.14 REMARK 500 15 PRO A 72 97.19 -69.82 REMARK 500 16 ASP A 52 -34.16 -36.67 REMARK 500 16 HIS A 68 161.68 -45.26 REMARK 500 16 SER A 77 99.85 -58.04 REMARK 500 16 PRO A 79 85.60 -69.78 REMARK 500 17 GLN A 9 -43.34 -132.42 REMARK 500 17 SER A 14 134.28 -174.46 REMARK 500 17 ASN A 26 -70.44 -104.92 REMARK 500 17 CYS A 42 151.84 -46.32 REMARK 500 17 ASP A 52 -33.17 -36.09 REMARK 500 17 SER A 77 82.12 -67.01 REMARK 500 18 SER A 3 100.79 -55.55 REMARK 500 18 SER A 5 140.99 -174.51 REMARK 500 18 ASN A 26 -62.96 -120.64 REMARK 500 18 CYS A 42 151.25 -47.27 REMARK 500 18 HIS A 68 157.60 -46.20 REMARK 500 18 SER A 77 47.58 36.84 REMARK 500 18 PRO A 79 2.82 -69.80 REMARK 500 19 GLU A 13 46.33 -87.66 REMARK 500 19 CYS A 42 151.74 -46.73 REMARK 500 19 ASP A 52 -37.25 -37.60 REMARK 500 19 HIS A 68 164.18 -45.36 REMARK 500 19 PRO A 79 97.94 -69.71 REMARK 500 20 SER A 2 44.73 -80.51 REMARK 500 20 SER A 5 158.87 -45.35 REMARK 500 20 GLU A 13 158.14 -38.70 REMARK 500 20 ASN A 26 -62.05 -121.16 REMARK 500 20 CYS A 42 151.51 -49.16 REMARK 500 20 HIS A 68 160.47 -43.68 REMARK 500 20 PRO A 79 -175.12 -69.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 64 ND1 REMARK 620 2 HIS A 68 ND1 116.8 REMARK 620 3 CYS A 39 SG 107.2 115.8 REMARK 620 4 CYS A 42 SG 106.9 105.0 103.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 24 SG REMARK 620 2 CYS A 27 SG 108.3 REMARK 620 3 CYS A 51 SG 108.5 117.9 REMARK 620 4 CYS A 54 SG 105.6 110.8 105.0 REMARK 620 N 1 2 3 REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSI002027679.1 RELATED DB: TARGETDB DBREF 2FC7 A 8 76 GB 23272439 AAH35079 313 381 SEQADV 2FC7 GLY A 1 GB 23272439 CLONING ARTIFACT SEQADV 2FC7 SER A 2 GB 23272439 CLONING ARTIFACT SEQADV 2FC7 SER A 3 GB 23272439 CLONING ARTIFACT SEQADV 2FC7 GLY A 4 GB 23272439 CLONING ARTIFACT SEQADV 2FC7 SER A 5 GB 23272439 CLONING ARTIFACT SEQADV 2FC7 SER A 6 GB 23272439 CLONING ARTIFACT SEQADV 2FC7 GLY A 7 GB 23272439 CLONING ARTIFACT SEQADV 2FC7 SER A 77 GB 23272439 CLONING ARTIFACT SEQADV 2FC7 GLY A 78 GB 23272439 CLONING ARTIFACT SEQADV 2FC7 PRO A 79 GB 23272439 CLONING ARTIFACT SEQADV 2FC7 SER A 80 GB 23272439 CLONING ARTIFACT SEQADV 2FC7 SER A 81 GB 23272439 CLONING ARTIFACT SEQADV 2FC7 GLY A 82 GB 23272439 CLONING ARTIFACT SEQRES 1 A 82 GLY SER SER GLY SER SER GLY GLN GLN MET GLN ALA GLU SEQRES 2 A 82 SER GLY PHE VAL GLN HIS VAL GLY PHE LYS CYS ASP ASN SEQRES 3 A 82 CYS GLY ILE GLU PRO ILE GLN GLY VAL ARG TRP HIS CYS SEQRES 4 A 82 GLN ASP CYS PRO PRO GLU MET SER LEU ASP PHE CYS ASP SEQRES 5 A 82 SER CYS SER ASP CYS LEU HIS GLU THR ASP ILE HIS LYS SEQRES 6 A 82 GLU ASP HIS GLN LEU GLU PRO ILE TYR ARG SER SER GLY SEQRES 7 A 82 PRO SER SER GLY HET ZN A 201 1 HET ZN A 401 1 HETNAM ZN ZINC ION FORMUL 2 ZN 2(ZN 2+) HELIX 1 1 ASP A 52 CYS A 54 5 3 SHEET 1 A 2 GLN A 18 HIS A 19 0 SHEET 2 A 2 ILE A 32 GLN A 33 -1 O ILE A 32 N HIS A 19 SHEET 1 B 3 ASP A 49 CYS A 51 0 SHEET 2 B 3 ARG A 36 CYS A 39 -1 N TRP A 37 O PHE A 50 SHEET 3 B 3 LEU A 70 ILE A 73 -1 O ILE A 73 N ARG A 36 LINK ZN ZN A 401 ND1 HIS A 64 1555 1555 2.05 LINK ZN ZN A 401 ND1 HIS A 68 1555 1555 2.05 LINK ZN ZN A 201 SG CYS A 24 1555 1555 2.25 LINK ZN ZN A 201 SG CYS A 27 1555 1555 2.25 LINK ZN ZN A 201 SG CYS A 51 1555 1555 2.25 LINK ZN ZN A 201 SG CYS A 54 1555 1555 2.35 LINK ZN ZN A 401 SG CYS A 39 1555 1555 2.29 LINK ZN ZN A 401 SG CYS A 42 1555 1555 2.35 CISPEP 1 GLU A 30 PRO A 31 1 -0.05 CISPEP 2 GLU A 30 PRO A 31 2 -0.03 CISPEP 3 GLU A 30 PRO A 31 3 -0.09 CISPEP 4 GLU A 30 PRO A 31 4 0.01 CISPEP 5 GLU A 30 PRO A 31 5 -0.04 CISPEP 6 GLU A 30 PRO A 31 6 0.01 CISPEP 7 GLU A 30 PRO A 31 7 0.05 CISPEP 8 GLU A 30 PRO A 31 8 -0.07 CISPEP 9 GLU A 30 PRO A 31 9 0.00 CISPEP 10 GLU A 30 PRO A 31 10 0.00 CISPEP 11 GLU A 30 PRO A 31 11 -0.06 CISPEP 12 GLU A 30 PRO A 31 12 0.01 CISPEP 13 GLU A 30 PRO A 31 13 -0.10 CISPEP 14 GLU A 30 PRO A 31 14 0.02 CISPEP 15 GLU A 30 PRO A 31 15 -0.05 CISPEP 16 GLU A 30 PRO A 31 16 -0.02 CISPEP 17 GLU A 30 PRO A 31 17 -0.13 CISPEP 18 GLU A 30 PRO A 31 18 -0.02 CISPEP 19 GLU A 30 PRO A 31 19 -0.04 CISPEP 20 GLU A 30 PRO A 31 20 -0.03 SITE 1 AC1 4 CYS A 24 CYS A 27 CYS A 51 CYS A 54 SITE 1 AC2 4 CYS A 39 CYS A 42 HIS A 64 HIS A 68 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 218 0 2 1 5 0 2 6 0 0 0 7 END