HEADER TRANSFERASE 08-DEC-05 2FAW TITLE CRYSTAL STRUCTURE OF PAPAYA GLUTAMINYL CYCLASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTAMINE CYCLOTRANSFERASE; COMPND 3 CHAIN: A, B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CARICA PAPAYA; SOURCE 3 ORGANISM_COMMON: PAPAYA; SOURCE 4 ORGANISM_TAXID: 3649; SOURCE 5 OTHER_DETAILS: LATEX KEYWDS 5-BLADED BETA-PROPELLER, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.WINTJENS,H.BELRHALI,B.CLANTIN,M.AZARKAN,C.BOMPARD,D.BAEYENS-VOLANT, AUTHOR 2 Y.LOOZE,V.VILLERET REVDAT 4 29-JUL-20 2FAW 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 13-JUL-11 2FAW 1 VERSN REVDAT 2 24-FEB-09 2FAW 1 VERSN REVDAT 1 03-OCT-06 2FAW 0 JRNL AUTH R.WINTJENS,H.BELRHALI,B.CLANTIN,M.AZARKAN,C.BOMPARD, JRNL AUTH 2 D.BAEYENS-VOLANT,Y.LOOZE,V.VILLERET JRNL TITL CRYSTAL STRUCTURE OF PAPAYA GLUTAMINYL CYCLASE, AN ARCHETYPE JRNL TITL 2 FOR PLANT AND BACTERIAL GLUTAMINYL CYCLASES. JRNL REF J.MOL.BIOL. V. 357 457 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16438985 JRNL DOI 10.1016/J.JMB.2005.12.029 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.AZARKAN,C.CLANTIN,C.BOMPARD,H.BELRHALI,D.BAEYENS-VOLANT, REMARK 1 AUTH 2 Y.LOOZE,V.VILLERET REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY X-RAY DIFFRACTION STUDIES OF REMARK 1 TITL 2 THE GLUTAMINYL CYCLASE FROM CARICA PAPAYA LATEX REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. F61 59 2005 REMARK 1 REFN ESSN 1744-3091 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 61499 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3075 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4260 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1740 REMARK 3 BIN FREE R VALUE SET COUNT : 224 REMARK 3 BIN FREE R VALUE : 0.2220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4124 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 101 REMARK 3 SOLVENT ATOMS : 897 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.07000 REMARK 3 B22 (A**2) : 0.89000 REMARK 3 B33 (A**2) : -0.82000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.184 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.106 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.063 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.853 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4330 ; 0.020 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5864 ; 1.933 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 498 ; 6.815 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 652 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3222 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3823 ; 0.243 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 1304 ; 0.181 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 102 ; 0.223 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 66 ; 0.212 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2479 ; 0.889 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4004 ; 1.484 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1851 ; 2.015 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1860 ; 3.027 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4330 ; 0.986 ; 2.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 899 ; 1.897 ; 2.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4225 ; 1.797 ; 2.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2FAW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000035665. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUL-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.953718, 1.77122 REMARK 200 MONOCHROMATOR : CHANEL CUT SI 111 MONOCHROMATOR REMARK 200 OPTICS : TOROIDAL FOCUSSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SCALE REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61500 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 19.537 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 28.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 41.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 29.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.27900 REMARK 200 FOR SHELL : 15.30 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 85 MM TRIS-HCL, 0.17 M SODIUM ACETATE, REMARK 280 25% PEG 4000, 15% GLYCEROL, PH 8.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.41000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.08500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.60000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.08500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.41000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.60000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL FORM OF THE PROTEIN IS MONOMERIC REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 1 REMARK 465 PRO A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 ARG A 255 REMARK 465 ASP A 256 REMARK 465 ASN A 257 REMARK 465 THR A 258 REMARK 465 LEU A 259 REMARK 465 SER A 260 REMARK 465 LEU A 261 REMARK 465 LYS A 262 REMARK 465 THR A 263 REMARK 465 ASP A 264 REMARK 465 ILE A 265 REMARK 465 ASP A 266 REMARK 465 ARG B 1 REMARK 465 PRO B 2 REMARK 465 SER B 3 REMARK 465 SER B 4 REMARK 465 ARG B 255 REMARK 465 ASP B 256 REMARK 465 ASN B 257 REMARK 465 THR B 258 REMARK 465 LEU B 259 REMARK 465 SER B 260 REMARK 465 LEU B 261 REMARK 465 LYS B 262 REMARK 465 THR B 263 REMARK 465 ASP B 264 REMARK 465 ILE B 265 REMARK 465 ASP B 266 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1219 O HOH B 1214 2.10 REMARK 500 C4 NAG C 1 C1 NAG C 2 2.14 REMARK 500 O4 NAG D 1 C2 NAG D 3 2.18 REMARK 500 ND2 ASN A 101 O5 NAG C 1 2.18 REMARK 500 OD2 ASP B 204 O HOH B 1212 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 203 O PRO B 19 3545 1.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 203 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 29 -81.46 -93.13 REMARK 500 LEU A 40 131.56 80.51 REMARK 500 GLU A 69 -134.78 -126.39 REMARK 500 TRP A 110 -92.81 -106.95 REMARK 500 ASN A 155 -119.62 -116.63 REMARK 500 ASP A 206 -154.23 -90.31 REMARK 500 ASN A 209 126.69 -172.17 REMARK 500 LYS A 218 61.15 62.17 REMARK 500 THR A 223 -159.59 -147.30 REMARK 500 ALA B 29 -78.65 -97.08 REMARK 500 LEU B 40 127.16 75.67 REMARK 500 GLU B 69 -137.23 -127.09 REMARK 500 TRP B 110 -84.92 -107.55 REMARK 500 LYS B 117 -54.88 -120.08 REMARK 500 ASP B 123 21.34 -144.69 REMARK 500 ASN B 155 -120.64 -125.29 REMARK 500 GLN B 170 3.84 82.22 REMARK 500 ASP B 206 -154.10 -88.82 REMARK 500 ASN B 209 131.65 -172.76 REMARK 500 THR B 223 -159.98 -150.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 26 O REMARK 620 2 GLU A 156 OE1 85.7 REMARK 620 3 GLU A 156 OE2 112.3 53.1 REMARK 620 4 LEU A 157 O 157.4 84.7 77.5 REMARK 620 5 GLU A 158 OE1 94.1 159.7 142.9 88.0 REMARK 620 6 ILE A 211 O 84.8 118.6 75.7 117.7 81.5 REMARK 620 7 HOH A1198 O 83.9 78.2 125.1 74.2 81.7 158.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1002 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU B 26 O REMARK 620 2 GLU B 156 OE1 84.5 REMARK 620 3 GLU B 156 OE2 112.0 53.1 REMARK 620 4 LEU B 157 O 158.1 88.0 78.9 REMARK 620 5 GLU B 158 OE1 92.9 162.1 142.6 88.0 REMARK 620 6 ILE B 211 O 83.1 118.9 77.6 118.4 78.2 REMARK 620 7 HOH B1191 O 83.0 80.0 126.9 75.5 82.0 155.1 REMARK 620 N 1 2 3 4 5 6 DBREF 2FAW A 1 266 UNP O81226 O81226_CARPA 23 288 DBREF 2FAW B 1 266 UNP O81226 O81226_CARPA 23 288 SEQRES 1 A 266 ARG PRO SER SER ARG VAL TYR ILE VAL GLU VAL LEU ASN SEQRES 2 A 266 GLU PHE PRO HIS ASP PRO TYR ALA PHE THR GLN GLY LEU SEQRES 3 A 266 VAL TYR ALA GLU ASN ASP THR LEU PHE GLU SER THR GLY SEQRES 4 A 266 LEU TYR GLY ARG SER SER VAL ARG GLN VAL ALA LEU GLN SEQRES 5 A 266 THR GLY LYS VAL GLU ASN ILE HIS LYS MET ASP ASP SER SEQRES 6 A 266 TYR PHE GLY GLU GLY LEU THR LEU LEU ASN GLU LYS LEU SEQRES 7 A 266 TYR GLN VAL VAL TRP LEU LYS ASN ILE GLY PHE ILE TYR SEQRES 8 A 266 ASP ARG ARG THR LEU SER ASN ILE LYS ASN PHE THR HIS SEQRES 9 A 266 GLN MET LYS ASP GLY TRP GLY LEU ALA THR ASP GLY LYS SEQRES 10 A 266 ILE LEU TYR GLY SER ASP GLY THR SER ILE LEU TYR GLU SEQRES 11 A 266 ILE ASP PRO HIS THR PHE LYS LEU ILE LYS LYS HIS ASN SEQRES 12 A 266 VAL LYS TYR ASN GLY HIS ARG VAL ILE ARG LEU ASN GLU SEQRES 13 A 266 LEU GLU TYR ILE ASN GLY GLU VAL TRP ALA ASN ILE TRP SEQRES 14 A 266 GLN THR ASP CYS ILE ALA ARG ILE SER ALA LYS ASP GLY SEQRES 15 A 266 THR LEU LEU GLY TRP ILE LEU LEU PRO ASN LEU ARG LYS SEQRES 16 A 266 LYS LEU ILE ASP GLU GLY PHE ARG ASP ILE ASP VAL LEU SEQRES 17 A 266 ASN GLY ILE ALA TRP ASP GLN GLU ASN LYS ARG ILE PHE SEQRES 18 A 266 VAL THR GLY LYS LEU TRP PRO LYS LEU PHE GLU ILE LYS SEQRES 19 A 266 LEU HIS LEU VAL ARG HIS ARG ILE PRO ASP GLY TYR ILE SEQRES 20 A 266 GLU ARG HIS CYS LEU ASN LEU ARG ASP ASN THR LEU SER SEQRES 21 A 266 LEU LYS THR ASP ILE ASP SEQRES 1 B 266 ARG PRO SER SER ARG VAL TYR ILE VAL GLU VAL LEU ASN SEQRES 2 B 266 GLU PHE PRO HIS ASP PRO TYR ALA PHE THR GLN GLY LEU SEQRES 3 B 266 VAL TYR ALA GLU ASN ASP THR LEU PHE GLU SER THR GLY SEQRES 4 B 266 LEU TYR GLY ARG SER SER VAL ARG GLN VAL ALA LEU GLN SEQRES 5 B 266 THR GLY LYS VAL GLU ASN ILE HIS LYS MET ASP ASP SER SEQRES 6 B 266 TYR PHE GLY GLU GLY LEU THR LEU LEU ASN GLU LYS LEU SEQRES 7 B 266 TYR GLN VAL VAL TRP LEU LYS ASN ILE GLY PHE ILE TYR SEQRES 8 B 266 ASP ARG ARG THR LEU SER ASN ILE LYS ASN PHE THR HIS SEQRES 9 B 266 GLN MET LYS ASP GLY TRP GLY LEU ALA THR ASP GLY LYS SEQRES 10 B 266 ILE LEU TYR GLY SER ASP GLY THR SER ILE LEU TYR GLU SEQRES 11 B 266 ILE ASP PRO HIS THR PHE LYS LEU ILE LYS LYS HIS ASN SEQRES 12 B 266 VAL LYS TYR ASN GLY HIS ARG VAL ILE ARG LEU ASN GLU SEQRES 13 B 266 LEU GLU TYR ILE ASN GLY GLU VAL TRP ALA ASN ILE TRP SEQRES 14 B 266 GLN THR ASP CYS ILE ALA ARG ILE SER ALA LYS ASP GLY SEQRES 15 B 266 THR LEU LEU GLY TRP ILE LEU LEU PRO ASN LEU ARG LYS SEQRES 16 B 266 LYS LEU ILE ASP GLU GLY PHE ARG ASP ILE ASP VAL LEU SEQRES 17 B 266 ASN GLY ILE ALA TRP ASP GLN GLU ASN LYS ARG ILE PHE SEQRES 18 B 266 VAL THR GLY LYS LEU TRP PRO LYS LEU PHE GLU ILE LYS SEQRES 19 B 266 LEU HIS LEU VAL ARG HIS ARG ILE PRO ASP GLY TYR ILE SEQRES 20 B 266 GLU ARG HIS CYS LEU ASN LEU ARG ASP ASN THR LEU SER SEQRES 21 B 266 LEU LYS THR ASP ILE ASP MODRES 2FAW ASN A 101 ASN GLYCOSYLATION SITE MODRES 2FAW ASN B 101 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET FUC C 4 10 HET NAG D 1 14 HET FUC D 2 10 HET NAG D 3 14 HET ZN A1001 1 HET TRS A1003 8 HET ZN B1002 1 HET ACY B1004 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM ZN ZINC ION HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM ACY ACETIC ACID HETSYN TRS TRIS BUFFER FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 3 BMA C6 H12 O6 FORMUL 3 FUC 2(C6 H12 O5) FORMUL 5 ZN 2(ZN 2+) FORMUL 6 TRS C4 H12 N O3 1+ FORMUL 8 ACY C2 H4 O2 FORMUL 9 HOH *897(H2 O) HELIX 1 1 LEU A 190 GLU A 200 1 11 HELIX 2 2 GLY A 245 LEU A 252 1 8 HELIX 3 3 LEU B 190 GLU B 200 1 11 HELIX 4 4 GLY B 245 CYS B 251 1 7 SHEET 1 A 8 LEU A 154 ILE A 160 0 SHEET 2 A 8 GLU A 163 ILE A 168 -1 O TRP A 165 N GLU A 158 SHEET 3 A 8 CYS A 173 SER A 178 -1 O ALA A 175 N ALA A 166 SHEET 4 A 8 LEU A 184 LEU A 189 -1 O GLY A 186 N ARG A 176 SHEET 5 A 8 VAL A 6 PRO A 16 1 N TYR A 7 O TRP A 187 SHEET 6 A 8 LYS A 229 LEU A 237 -1 O GLU A 232 N LEU A 12 SHEET 7 A 8 ARG A 219 GLY A 224 -1 N VAL A 222 O PHE A 231 SHEET 8 A 8 LEU A 208 ASP A 214 -1 N ASP A 214 O ARG A 219 SHEET 1 B 4 THR A 23 TYR A 28 0 SHEET 2 B 4 THR A 33 THR A 38 -1 O SER A 37 N GLN A 24 SHEET 3 B 4 SER A 45 ALA A 50 -1 O VAL A 49 N LEU A 34 SHEET 4 B 4 VAL A 56 LYS A 61 -1 O HIS A 60 N VAL A 46 SHEET 1 C 4 GLY A 68 LEU A 74 0 SHEET 2 C 4 LYS A 77 VAL A 82 -1 O LYS A 77 N LEU A 74 SHEET 3 C 4 ILE A 87 ASP A 92 -1 O PHE A 89 N GLN A 80 SHEET 4 C 4 ASN A 98 THR A 103 -1 O PHE A 102 N GLY A 88 SHEET 1 D 4 LEU A 112 THR A 114 0 SHEET 2 D 4 LEU A 119 SER A 122 -1 O TYR A 120 N ALA A 113 SHEET 3 D 4 ILE A 127 ILE A 131 -1 O ILE A 131 N LEU A 119 SHEET 4 D 4 LEU A 138 ASN A 143 -1 O ILE A 139 N GLU A 130 SHEET 1 E 2 LYS A 145 TYR A 146 0 SHEET 2 E 2 HIS A 149 ARG A 150 -1 O HIS A 149 N TYR A 146 SHEET 1 F 8 LEU B 154 ILE B 160 0 SHEET 2 F 8 GLU B 163 ILE B 168 -1 O TRP B 165 N GLU B 158 SHEET 3 F 8 CYS B 173 SER B 178 -1 O ILE B 177 N VAL B 164 SHEET 4 F 8 LEU B 184 LEU B 189 -1 O ILE B 188 N ILE B 174 SHEET 5 F 8 VAL B 6 PRO B 16 1 N TYR B 7 O TRP B 187 SHEET 6 F 8 LYS B 229 LEU B 237 -1 O GLU B 232 N LEU B 12 SHEET 7 F 8 ARG B 219 GLY B 224 -1 N VAL B 222 O PHE B 231 SHEET 8 F 8 LEU B 208 ASP B 214 -1 N ALA B 212 O PHE B 221 SHEET 1 G 4 THR B 23 TYR B 28 0 SHEET 2 G 4 THR B 33 THR B 38 -1 O SER B 37 N GLN B 24 SHEET 3 G 4 SER B 45 ALA B 50 -1 O VAL B 49 N LEU B 34 SHEET 4 G 4 VAL B 56 LYS B 61 -1 O HIS B 60 N VAL B 46 SHEET 1 H 4 GLY B 68 LEU B 74 0 SHEET 2 H 4 LYS B 77 VAL B 82 -1 O LYS B 77 N LEU B 74 SHEET 3 H 4 ILE B 87 ASP B 92 -1 O PHE B 89 N GLN B 80 SHEET 4 H 4 ASN B 98 THR B 103 -1 O PHE B 102 N GLY B 88 SHEET 1 I 4 LEU B 112 THR B 114 0 SHEET 2 I 4 LEU B 119 GLY B 121 -1 O TYR B 120 N ALA B 113 SHEET 3 I 4 ILE B 127 ILE B 131 -1 O TYR B 129 N GLY B 121 SHEET 4 I 4 LEU B 138 ASN B 143 -1 O ILE B 139 N GLU B 130 SHEET 1 J 2 LYS B 145 TYR B 146 0 SHEET 2 J 2 HIS B 149 ARG B 150 -1 O HIS B 149 N TYR B 146 SSBOND 1 CYS A 173 CYS A 251 1555 1555 2.08 SSBOND 2 CYS B 173 CYS B 251 1555 1555 2.06 LINK ND2 ASN A 101 C1 NAG C 1 1555 1555 1.59 LINK ND2 ASN B 101 C1 NAG D 1 1555 1555 1.74 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.33 LINK O3 NAG C 1 C1 FUC C 4 1555 1555 1.45 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.42 LINK O3 NAG D 1 C1 FUC D 2 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 3 1555 1555 1.34 LINK O LEU A 26 ZN ZN A1001 1555 1555 2.19 LINK OE1 GLU A 156 ZN ZN A1001 1555 1555 2.31 LINK OE2 GLU A 156 ZN ZN A1001 1555 1555 2.46 LINK O LEU A 157 ZN ZN A1001 1555 1555 2.27 LINK OE1 GLU A 158 ZN ZN A1001 1555 1555 2.22 LINK O ILE A 211 ZN ZN A1001 1555 1555 2.24 LINK ZN ZN A1001 O HOH A1198 1555 1555 2.29 LINK O LEU B 26 ZN ZN B1002 1555 1555 2.24 LINK OE1 GLU B 156 ZN ZN B1002 1555 1555 2.33 LINK OE2 GLU B 156 ZN ZN B1002 1555 1555 2.50 LINK O LEU B 157 ZN ZN B1002 1555 1555 2.24 LINK OE1 GLU B 158 ZN ZN B1002 1555 1555 2.22 LINK O ILE B 211 ZN ZN B1002 1555 1555 2.24 LINK ZN ZN B1002 O HOH B1191 1555 1555 2.31 CRYST1 62.820 81.200 108.170 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015918 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012315 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009245 0.00000 MASTER 406 0 11 4 44 0 0 6 0 0 0 42 END