HEADER GENE REGULATION 02-DEC-05 2F8D TITLE BENM EFFECTOR-BINDING DOMAIN CRYSTALLIZED FROM HIGH PH CONDITIONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: HTH-TYPE TRANSCRIPTIONAL REGULATOR BENM; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BEN AND CAT OPERON TRANSCRIPTIONAL REGULATOR; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAYLYI; SOURCE 3 ORGANISM_TAXID: 202950; SOURCE 4 STRAIN: ADP1; SOURCE 5 GENE: BENM; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: DE3 (BL21); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21B KEYWDS BENM, LTTR, LYSR-TYPE TRANSCRIPTIONAL REGULATOR, TETRAMERIZATION, KEYWDS 2 EFFECTOR BINDING DOMAIN, INDUCER BINDING DOMAIN, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR O.C.EZEZIKA,S.HADDAD,E.L.NEIDLE,C.MOMANY REVDAT 5 18-OCT-17 2F8D 1 REMARK REVDAT 4 13-JUL-11 2F8D 1 VERSN REVDAT 3 08-SEP-10 2F8D 1 JRNL REVDAT 2 24-FEB-09 2F8D 1 VERSN REVDAT 1 12-DEC-06 2F8D 0 JRNL AUTH O.C.EZEZIKA,S.HADDAD,E.L.NEIDLE,C.MOMANY JRNL TITL OLIGOMERIZATION OF BENM, A LYSR-TYPE TRANSCRIPTIONAL JRNL TITL 2 REGULATOR: STRUCTURAL BASIS FOR THE AGGREGATION OF PROTEINS JRNL TITL 3 IN THIS FAMILY. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 63 361 2007 JRNL REFN ESSN 1744-3091 JRNL PMID 17565172 JRNL DOI 10.1107/S1744309107019185 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.CLARK,S.HADDAD,E.NEIDLE,C.MOMANY REMARK 1 TITL CRYSTALLIZATION OF THE EFFECTOR-BINDING DOMAINS OF BENM AND REMARK 1 TITL 2 BENM, LYSR-TYPE TRANSCRIPTIONAL REGULATORS FROM REMARK 1 TITL 3 ACINETOBACTER SP. ADP1. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 60 105 2004 REMARK 1 REFN ISSN 0907-4449 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 92.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 24162 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.148 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1299 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1687 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.01 REMARK 3 BIN R VALUE (WORKING SET) : 0.2220 REMARK 3 BIN FREE R VALUE SET COUNT : 103 REMARK 3 BIN FREE R VALUE : 0.2410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3503 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 68 REMARK 3 SOLVENT ATOMS : 455 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.56000 REMARK 3 B22 (A**2) : -0.06000 REMARK 3 B33 (A**2) : -1.49000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.291 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.221 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.139 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.356 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3667 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4970 ; 1.083 ; 1.995 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 443 ; 5.470 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 162 ;37.052 ;23.765 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 633 ;16.152 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;14.854 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 556 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2747 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1801 ; 0.189 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2509 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 334 ; 0.137 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 48 ; 0.149 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 20 ; 0.204 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2260 ; 0.740 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3591 ; 1.639 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1547 ; 3.176 ; 7.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1376 ; 4.887 ;10.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2F8D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-DEC-05. REMARK 100 THE DEPOSITION ID IS D_1000035578. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 10 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97935 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25480 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 92.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 7.160 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.42100 REMARK 200 R SYM FOR SHELL (I) : 0.00000 REMARK 200 FOR SHELL : 5.850 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2F6G REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, GLYCEROL, IMIDAZOLE, TRIS, REMARK 280 CAPS, KBR, NACL, BENZOATE, PH 10, MICROBATCH UNDER OIL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 92.15300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 92.15300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 47.03000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 53.20050 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 47.03000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 53.20050 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 92.15300 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 47.03000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 53.20050 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 92.15300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 47.03000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 53.20050 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A DIMER. A DIMER IS IN THE REMARK 300 ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 81 REMARK 465 THR A 82 REMARK 465 LYS A 83 REMARK 465 ARG A 84 REMARK 465 ILE A 85 REMARK 465 ALA A 86 REMARK 465 SER A 87 REMARK 465 VAL A 88 REMARK 465 HIS A 310 REMARK 465 HIS A 311 REMARK 465 HIS A 312 REMARK 465 MET B 81 REMARK 465 THR B 82 REMARK 465 LYS B 83 REMARK 465 ARG B 84 REMARK 465 ILE B 85 REMARK 465 ALA B 86 REMARK 465 SER B 87 REMARK 465 VAL B 88 REMARK 465 HIS B 307 REMARK 465 HIS B 308 REMARK 465 HIS B 309 REMARK 465 HIS B 310 REMARK 465 HIS B 311 REMARK 465 HIS B 312 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 309 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1025 O HOH B 1180 5545 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 150 77.24 -102.38 REMARK 500 ASP A 151 119.33 -161.00 REMARK 500 GLN A 248 -8.53 -57.63 REMARK 500 GLU B 278 19.46 -142.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEZ A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEZ A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEZ B 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1009 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1010 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2F6G RELATED DB: PDB REMARK 900 RELATED ID: 2F6P RELATED DB: PDB REMARK 900 RELATED ID: 2F78 RELATED DB: PDB REMARK 900 RELATED ID: 2F7A RELATED DB: PDB REMARK 900 RELATED ID: 2F7B RELATED DB: PDB REMARK 900 RELATED ID: 2F7C RELATED DB: PDB REMARK 900 RELATED ID: 2F97 RELATED DB: PDB DBREF 2F8D A 81 304 UNP O68014 BENM_ACIAD 81 304 DBREF 2F8D B 81 304 UNP O68014 BENM_ACIAD 81 304 SEQADV 2F8D LEU A 305 UNP O68014 CLONING ARTIFACT SEQADV 2F8D GLU A 306 UNP O68014 CLONING ARTIFACT SEQADV 2F8D HIS A 307 UNP O68014 EXPRESSION TAG SEQADV 2F8D HIS A 308 UNP O68014 EXPRESSION TAG SEQADV 2F8D HIS A 309 UNP O68014 EXPRESSION TAG SEQADV 2F8D HIS A 310 UNP O68014 EXPRESSION TAG SEQADV 2F8D HIS A 311 UNP O68014 EXPRESSION TAG SEQADV 2F8D HIS A 312 UNP O68014 EXPRESSION TAG SEQADV 2F8D LEU B 305 UNP O68014 CLONING ARTIFACT SEQADV 2F8D GLU B 306 UNP O68014 CLONING ARTIFACT SEQADV 2F8D HIS B 307 UNP O68014 EXPRESSION TAG SEQADV 2F8D HIS B 308 UNP O68014 EXPRESSION TAG SEQADV 2F8D HIS B 309 UNP O68014 EXPRESSION TAG SEQADV 2F8D HIS B 310 UNP O68014 EXPRESSION TAG SEQADV 2F8D HIS B 311 UNP O68014 EXPRESSION TAG SEQADV 2F8D HIS B 312 UNP O68014 EXPRESSION TAG SEQRES 1 A 232 MET THR LYS ARG ILE ALA SER VAL GLU LYS THR ILE ARG SEQRES 2 A 232 ILE GLY PHE VAL GLY SER LEU LEU PHE GLY LEU LEU PRO SEQRES 3 A 232 ARG ILE ILE HIS LEU TYR ARG GLN ALA HIS PRO ASN LEU SEQRES 4 A 232 ARG ILE GLU LEU TYR GLU MET GLY THR LYS ALA GLN THR SEQRES 5 A 232 GLU ALA LEU LYS GLU GLY ARG ILE ASP ALA GLY PHE GLY SEQRES 6 A 232 ARG LEU LYS ILE SER ASP PRO ALA ILE LYS ARG THR LEU SEQRES 7 A 232 LEU ARG ASN GLU ARG LEU MET VAL ALA VAL HIS ALA SER SEQRES 8 A 232 HIS PRO LEU ASN GLN MET LYS ASP LYS GLY VAL HIS LEU SEQRES 9 A 232 ASN ASP LEU ILE ASP GLU LYS ILE LEU LEU TYR PRO SER SEQRES 10 A 232 SER PRO LYS PRO ASN PHE SER THR HIS VAL MET ASN ILE SEQRES 11 A 232 PHE SER ASP HIS GLY LEU GLU PRO THR LYS ILE ASN GLU SEQRES 12 A 232 VAL ARG GLU VAL GLN LEU ALA LEU GLY LEU VAL ALA ALA SEQRES 13 A 232 GLY GLU GLY ILE SER LEU VAL PRO ALA SER THR GLN SER SEQRES 14 A 232 ILE GLN LEU PHE ASN LEU SER TYR VAL PRO LEU LEU ASP SEQRES 15 A 232 PRO ASP ALA ILE THR PRO ILE TYR ILE ALA VAL ARG ASN SEQRES 16 A 232 MET GLU GLU SER THR TYR ILE TYR SER LEU TYR GLU THR SEQRES 17 A 232 ILE ARG GLN ILE TYR ALA TYR GLU GLY PHE THR GLU PRO SEQRES 18 A 232 PRO ASN TRP LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 232 MET THR LYS ARG ILE ALA SER VAL GLU LYS THR ILE ARG SEQRES 2 B 232 ILE GLY PHE VAL GLY SER LEU LEU PHE GLY LEU LEU PRO SEQRES 3 B 232 ARG ILE ILE HIS LEU TYR ARG GLN ALA HIS PRO ASN LEU SEQRES 4 B 232 ARG ILE GLU LEU TYR GLU MET GLY THR LYS ALA GLN THR SEQRES 5 B 232 GLU ALA LEU LYS GLU GLY ARG ILE ASP ALA GLY PHE GLY SEQRES 6 B 232 ARG LEU LYS ILE SER ASP PRO ALA ILE LYS ARG THR LEU SEQRES 7 B 232 LEU ARG ASN GLU ARG LEU MET VAL ALA VAL HIS ALA SER SEQRES 8 B 232 HIS PRO LEU ASN GLN MET LYS ASP LYS GLY VAL HIS LEU SEQRES 9 B 232 ASN ASP LEU ILE ASP GLU LYS ILE LEU LEU TYR PRO SER SEQRES 10 B 232 SER PRO LYS PRO ASN PHE SER THR HIS VAL MET ASN ILE SEQRES 11 B 232 PHE SER ASP HIS GLY LEU GLU PRO THR LYS ILE ASN GLU SEQRES 12 B 232 VAL ARG GLU VAL GLN LEU ALA LEU GLY LEU VAL ALA ALA SEQRES 13 B 232 GLY GLU GLY ILE SER LEU VAL PRO ALA SER THR GLN SER SEQRES 14 B 232 ILE GLN LEU PHE ASN LEU SER TYR VAL PRO LEU LEU ASP SEQRES 15 B 232 PRO ASP ALA ILE THR PRO ILE TYR ILE ALA VAL ARG ASN SEQRES 16 B 232 MET GLU GLU SER THR TYR ILE TYR SER LEU TYR GLU THR SEQRES 17 B 232 ILE ARG GLN ILE TYR ALA TYR GLU GLY PHE THR GLU PRO SEQRES 18 B 232 PRO ASN TRP LEU GLU HIS HIS HIS HIS HIS HIS HET BEZ A1001 9 HET BEZ A1002 9 HET GOL A1005 6 HET GOL A1008 6 HET GOL A1009 6 HET GOL A1010 6 HET PO4 B1004 5 HET BEZ B1003 9 HET GOL B1006 6 HET GOL B1007 6 HETNAM BEZ BENZOIC ACID HETNAM GOL GLYCEROL HETNAM PO4 PHOSPHATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 BEZ 3(C7 H6 O2) FORMUL 5 GOL 6(C3 H8 O3) FORMUL 9 PO4 O4 P 3- FORMUL 13 HOH *455(H2 O) HELIX 1 1 GLY A 98 GLY A 103 5 6 HELIX 2 2 LEU A 104 HIS A 116 1 13 HELIX 3 3 GLY A 127 GLU A 137 1 11 HELIX 4 4 HIS A 172 LYS A 178 5 7 HELIX 5 5 HIS A 183 ILE A 188 5 6 HELIX 6 6 ASN A 202 HIS A 214 1 13 HELIX 7 7 GLU A 226 GLY A 237 1 12 HELIX 8 8 SER A 246 ILE A 250 5 5 HELIX 9 9 SER A 279 GLY A 297 1 19 HELIX 10 10 GLY B 98 GLY B 103 5 6 HELIX 11 11 LEU B 104 HIS B 116 1 13 HELIX 12 12 GLY B 127 GLU B 137 1 11 HELIX 13 13 HIS B 172 LYS B 178 5 7 HELIX 14 14 HIS B 183 ILE B 188 5 6 HELIX 15 15 ASN B 202 HIS B 214 1 13 HELIX 16 16 GLU B 226 ALA B 236 1 11 HELIX 17 17 SER B 246 ILE B 250 5 5 HELIX 18 18 SER B 279 GLY B 297 1 19 SHEET 1 A 6 ARG A 120 GLU A 125 0 SHEET 2 A 6 THR A 91 PHE A 96 1 N ILE A 94 O TYR A 124 SHEET 3 A 6 ALA A 142 GLY A 145 1 O PHE A 144 N GLY A 95 SHEET 4 A 6 ILE A 266 ARG A 274 -1 O TYR A 270 N GLY A 145 SHEET 5 A 6 ILE A 154 HIS A 169 -1 N GLU A 162 O THR A 267 SHEET 6 A 6 SER A 241 PRO A 244 -1 O SER A 241 N ALA A 167 SHEET 1 B 6 ARG A 120 GLU A 125 0 SHEET 2 B 6 THR A 91 PHE A 96 1 N ILE A 94 O TYR A 124 SHEET 3 B 6 ALA A 142 GLY A 145 1 O PHE A 144 N GLY A 95 SHEET 4 B 6 ILE A 266 ARG A 274 -1 O TYR A 270 N GLY A 145 SHEET 5 B 6 ILE A 154 HIS A 169 -1 N GLU A 162 O THR A 267 SHEET 6 B 6 LEU A 255 PRO A 259 -1 O SER A 256 N VAL A 168 SHEET 1 C 2 ILE A 192 LEU A 194 0 SHEET 2 C 2 ILE A 221 GLU A 223 1 O ASN A 222 N ILE A 192 SHEET 1 D 8 ARG B 120 GLU B 125 0 SHEET 2 D 8 THR B 91 PHE B 96 1 N ILE B 94 O GLU B 122 SHEET 3 D 8 ALA B 142 GLY B 145 1 O ALA B 142 N GLY B 95 SHEET 4 D 8 ILE B 266 ARG B 274 -1 O TYR B 270 N GLY B 145 SHEET 5 D 8 ILE B 154 HIS B 169 -1 N LEU B 159 O ILE B 269 SHEET 6 D 8 ILE B 240 PRO B 244 -1 O SER B 241 N ALA B 167 SHEET 7 D 8 ILE B 192 LEU B 194 1 N LEU B 193 O ILE B 240 SHEET 8 D 8 ILE B 221 GLU B 223 1 O ASN B 222 N LEU B 194 SHEET 1 E 6 ARG B 120 GLU B 125 0 SHEET 2 E 6 THR B 91 PHE B 96 1 N ILE B 94 O GLU B 122 SHEET 3 E 6 ALA B 142 GLY B 145 1 O ALA B 142 N GLY B 95 SHEET 4 E 6 ILE B 266 ARG B 274 -1 O TYR B 270 N GLY B 145 SHEET 5 E 6 ILE B 154 HIS B 169 -1 N LEU B 159 O ILE B 269 SHEET 6 E 6 LEU B 255 PRO B 259 -1 O SER B 256 N VAL B 168 CISPEP 1 TYR A 195 PRO A 196 0 -7.45 CISPEP 2 LYS A 200 PRO A 201 0 -6.16 CISPEP 3 TYR B 195 PRO B 196 0 -11.15 CISPEP 4 LYS B 200 PRO B 201 0 -0.54 SITE 1 AC1 7 LYS A 90 ILE A 92 ASP A 141 ARG A 274 SITE 2 AC1 7 GLU A 277 SER A 279 GLU B 278 SITE 1 AC2 9 VAL A 97 SER A 99 ARG A 146 LEU A 147 SITE 2 AC2 9 ASN A 202 PHE A 203 HIS A 206 HOH A1014 SITE 3 AC2 9 HOH A1045 SITE 1 AC3 7 LEU A 104 LEU A 105 ILE A 108 PHE A 144 SITE 2 AC3 7 ARG A 160 ILE A 269 TYR A 293 SITE 1 AC4 8 LEU B 104 LEU B 105 ILE B 108 PHE B 144 SITE 2 AC4 8 LEU B 159 ARG B 160 ILE B 269 TYR B 293 SITE 1 AC5 3 TYR A 124 ARG A 139 HOH A1184 SITE 1 AC6 8 LYS B 155 THR B 157 TYR B 286 ASN B 303 SITE 2 AC6 8 TRP B 304 LEU B 305 GLU B 306 HOH B1227 SITE 1 AC7 4 TYR B 124 ARG B 139 HOH B1171 HOH B1217 SITE 1 AC8 8 LYS A 155 THR A 157 TYR A 286 ASN A 303 SITE 2 AC8 8 TRP A 304 LEU A 305 GLU A 306 HOH A1116 SITE 1 AC9 5 GLY A 98 GLU A 125 SER A 198 HOH A1045 SITE 2 AC9 5 HOH A1237 SITE 1 BC1 7 THR A 132 LYS A 148 ILE A 149 SER A 150 SITE 2 BC1 7 ASP A 151 ASN A 185 HIS A 214 CRYST1 94.060 106.401 184.306 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010630 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009400 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005430 0.00000 MASTER 393 0 10 18 28 0 19 6 0 0 0 36 END