HEADER OXIDOREDUCTASE 27-OCT-05 2ET6 TITLE (3R)-HYDROXYACYL-COA DEHYDROGENASE DOMAIN OF CANDIDA TROPICALIS TITLE 2 PEROXISOMAL MULTIFUNCTIONAL ENZYME TYPE 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: (3R)-HYDROXYACYL-COA DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PEROXISOMAL HYDRATASE-DEHYDROGENASE-EPIMERASE, HDE, COMPND 5 MULTIFUNCTIONAL BETA-OXIDATION PROTEIN, MFP; COMPND 6 EC: 1.1.1.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA TROPICALIS; SOURCE 3 ORGANISM_TAXID: 5482; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 CODON PLUS(DE3)-RIL; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS DEHYDROGENASE, MFE-2, BETA-OXIDATION, PEROXISOME, SDR, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.S.YLIANTTILA,J.K.HILTUNEN,T.GLUMOFF REVDAT 4 20-OCT-21 2ET6 1 SEQADV REVDAT 3 13-JUL-11 2ET6 1 VERSN REVDAT 2 24-FEB-09 2ET6 1 VERSN REVDAT 1 23-MAY-06 2ET6 0 JRNL AUTH M.S.YLIANTTILA,N.V.PURSIAINEN,A.M.HAAPALAINEN,A.H.JUFFER, JRNL AUTH 2 Y.POIRIER,J.K.HILTUNEN,T.GLUMOFF JRNL TITL CRYSTAL STRUCTURE OF YEAST PEROXISOMAL MULTIFUNCTIONAL JRNL TITL 2 ENZYME: STRUCTURAL BASIS FOR SUBSTRATE SPECIFICITY OF JRNL TITL 3 (3R)-HYDROXYACYL-COA DEHYDROGENASE UNITS. JRNL REF J.MOL.BIOL. V. 358 1286 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16574148 JRNL DOI 10.1016/J.JMB.2006.03.001 REMARK 2 REMARK 2 RESOLUTION. 2.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 26573 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1355 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.22 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.34 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3667 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.2520 REMARK 3 BIN FREE R VALUE SET COUNT : 200 REMARK 3 BIN FREE R VALUE : 0.2990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4465 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 345 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.52000 REMARK 3 B22 (A**2) : -1.34000 REMARK 3 B33 (A**2) : 5.86000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.359 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.243 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.201 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.344 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.931 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.876 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4554 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4111 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6167 ; 1.296 ; 1.947 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9596 ; 0.789 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 579 ; 6.871 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 692 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5094 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 889 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1045 ; 0.196 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4938 ; 0.226 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 2705 ; 0.082 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 292 ; 0.156 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 15 ; 0.192 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 30 ; 0.136 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.240 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2877 ; 1.490 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4611 ; 2.099 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1677 ; 1.374 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1556 ; 1.902 ; 4.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 313 REMARK 3 ORIGIN FOR THE GROUP (A): 39.1720 38.3060 16.4350 REMARK 3 T TENSOR REMARK 3 T11: 0.4755 T22: 0.3843 REMARK 3 T33: 0.0260 T12: 0.0132 REMARK 3 T13: 0.0059 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 1.5030 L22: 0.2167 REMARK 3 L33: 0.3584 L12: 0.2059 REMARK 3 L13: -0.3307 L23: -0.0119 REMARK 3 S TENSOR REMARK 3 S11: 0.0311 S12: 0.0210 S13: 0.0281 REMARK 3 S21: 0.0301 S22: -0.0051 S23: -0.0417 REMARK 3 S31: -0.0006 S32: 0.0200 S33: -0.0259 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 314 A 592 REMARK 3 ORIGIN FOR THE GROUP (A): 18.6940 39.8420 19.2650 REMARK 3 T TENSOR REMARK 3 T11: 0.4762 T22: 0.3814 REMARK 3 T33: 0.0186 T12: 0.0068 REMARK 3 T13: 0.0116 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 1.8262 L22: 0.5591 REMARK 3 L33: 0.4201 L12: 0.1506 REMARK 3 L13: -0.0728 L23: 0.0363 REMARK 3 S TENSOR REMARK 3 S11: 0.0256 S12: 0.0451 S13: 0.0689 REMARK 3 S21: 0.0001 S22: -0.0071 S23: 0.0258 REMARK 3 S31: 0.0037 S32: -0.0570 S33: -0.0185 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2ET6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-NOV-05. REMARK 100 THE DEPOSITION ID IS D_1000035061. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JAN-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : ENRAF-NONIUS FR591 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27948 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.220 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.22 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.740 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY IGZ6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 4000, 0.1 M SODIUM ACETATE PH REMARK 280 4.2, 0.2 M AMMONIUM ACETATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.44750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.72250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.17000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.72250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.44750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.17000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ASYMMETRIC UNIT CONTAINS ONLY ONE BIOLOGICAL UNIT THAT REMARK 300 IS ONE MONOMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 41 REMARK 465 GLY A 42 REMARK 465 ALA A 43 REMARK 465 LEU A 44 REMARK 465 ASN A 45 REMARK 465 GLY A 46 REMARK 465 GLN A 47 REMARK 465 GLY A 48 REMARK 465 GLY A 49 REMARK 465 ASN A 50 REMARK 465 SER A 51 REMARK 465 THR A 504 REMARK 465 LEU A 505 REMARK 465 SER A 506 REMARK 465 ILE A 507 REMARK 465 MET A 508 REMARK 465 ARG A 509 REMARK 465 GLU A 510 REMARK 465 GLN A 511 REMARK 465 ASP A 512 REMARK 465 ASP A 604 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 789 O HOH A 867 3655 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 277 CE2 TYR A 277 CD2 0.096 REMARK 500 TYR A 297 CZ TYR A 297 CE2 0.084 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 5 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP A 79 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP A 353 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 408 CB - CG - OD2 ANGL. DEV. = 7.9 DEGREES REMARK 500 ASP A 420 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 531 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 64 33.16 -97.65 REMARK 500 ASP A 77 49.40 -84.47 REMARK 500 THR A 91 -173.90 -172.35 REMARK 500 ILE A 101 139.14 170.87 REMARK 500 SER A 149 -157.61 -90.38 REMARK 500 ALA A 239 114.67 -174.90 REMARK 500 PHE A 262 76.83 -64.45 REMARK 500 ASN A 288 137.67 -36.40 REMARK 500 THR A 453 -157.54 -98.43 REMARK 500 THR A 501 -78.67 -115.34 REMARK 500 ALA A 502 16.42 -163.48 REMARK 500 TYR A 516 66.26 -119.38 REMARK 500 REMARK 500 REMARK: NULL DBREF 2ET6 A 1 604 UNP P22414 FOX2_CANTR 1 604 SEQADV 2ET6 MET A 204 UNP P22414 LEU 204 CONFLICT SEQADV 2ET6 SER A 506 UNP P22414 THR 506 ENGINEERED MUTATION SEQADV 2ET6 MET A 508 UNP P22414 PHE 508 ENGINEERED MUTATION SEQRES 1 A 604 MET SER PRO VAL ASP PHE LYS ASP LYS VAL VAL ILE ILE SEQRES 2 A 604 THR GLY ALA GLY GLY GLY LEU GLY LYS TYR TYR SER LEU SEQRES 3 A 604 GLU PHE ALA LYS LEU GLY ALA LYS VAL VAL VAL ASN ASP SEQRES 4 A 604 LEU GLY GLY ALA LEU ASN GLY GLN GLY GLY ASN SER LYS SEQRES 5 A 604 ALA ALA ASP VAL VAL VAL ASP GLU ILE VAL LYS ASN GLY SEQRES 6 A 604 GLY VAL ALA VAL ALA ASP TYR ASN ASN VAL LEU ASP GLY SEQRES 7 A 604 ASP LYS ILE VAL GLU THR ALA VAL LYS ASN PHE GLY THR SEQRES 8 A 604 VAL HIS VAL ILE ILE ASN ASN ALA GLY ILE LEU ARG ASP SEQRES 9 A 604 ALA SER MET LYS LYS MET THR GLU LYS ASP TYR LYS LEU SEQRES 10 A 604 VAL ILE ASP VAL HIS LEU ASN GLY ALA PHE ALA VAL THR SEQRES 11 A 604 LYS ALA ALA TRP PRO TYR PHE GLN LYS GLN LYS TYR GLY SEQRES 12 A 604 ARG ILE VAL ASN THR SER SER PRO ALA GLY LEU TYR GLY SEQRES 13 A 604 ASN PHE GLY GLN ALA ASN TYR ALA SER ALA LYS SER ALA SEQRES 14 A 604 LEU LEU GLY PHE ALA GLU THR LEU ALA LYS GLU GLY ALA SEQRES 15 A 604 LYS TYR ASN ILE LYS ALA ASN ALA ILE ALA PRO LEU ALA SEQRES 16 A 604 ARG SER ARG MET THR GLU SER ILE MET PRO PRO PRO MET SEQRES 17 A 604 LEU GLU LYS LEU GLY PRO GLU LYS VAL ALA PRO LEU VAL SEQRES 18 A 604 LEU TYR LEU SER SER ALA GLU ASN GLU LEU THR GLY GLN SEQRES 19 A 604 PHE PHE GLU VAL ALA ALA GLY PHE TYR ALA GLN ILE ARG SEQRES 20 A 604 TRP GLU ARG SER GLY GLY VAL LEU PHE LYS PRO ASP GLN SEQRES 21 A 604 SER PHE THR ALA GLU VAL VAL ALA LYS ARG PHE SER GLU SEQRES 22 A 604 ILE LEU ASP TYR ASP ASP SER ARG LYS PRO GLU TYR LEU SEQRES 23 A 604 LYS ASN GLN TYR PRO PHE MET LEU ASN ASP TYR ALA THR SEQRES 24 A 604 LEU THR ASN GLU ALA ARG LYS LEU PRO ALA ASN ASP ALA SEQRES 25 A 604 SER GLY ALA PRO THR VAL SER LEU LYS ASP LYS VAL VAL SEQRES 26 A 604 LEU ILE THR GLY ALA GLY ALA GLY LEU GLY LYS GLU TYR SEQRES 27 A 604 ALA LYS TRP PHE ALA LYS TYR GLY ALA LYS VAL VAL VAL SEQRES 28 A 604 ASN ASP PHE LYS ASP ALA THR LYS THR VAL ASP GLU ILE SEQRES 29 A 604 LYS ALA ALA GLY GLY GLU ALA TRP PRO ASP GLN HIS ASP SEQRES 30 A 604 VAL ALA LYS ASP SER GLU ALA ILE ILE LYS ASN VAL ILE SEQRES 31 A 604 ASP LYS TYR GLY THR ILE ASP ILE LEU VAL ASN ASN ALA SEQRES 32 A 604 GLY ILE LEU ARG ASP ARG SER PHE ALA LYS MET SER LYS SEQRES 33 A 604 GLN GLU TRP ASP SER VAL GLN GLN VAL HIS LEU ILE GLY SEQRES 34 A 604 THR PHE ASN LEU SER ARG LEU ALA TRP PRO TYR PHE VAL SEQRES 35 A 604 GLU LYS GLN PHE GLY ARG ILE ILE ASN ILE THR SER THR SEQRES 36 A 604 SER GLY ILE TYR GLY ASN PHE GLY GLN ALA ASN TYR SER SEQRES 37 A 604 SER SER LYS ALA GLY ILE LEU GLY LEU SER LYS THR MET SEQRES 38 A 604 ALA ILE GLU GLY ALA LYS ASN ASN ILE LYS VAL ASN ILE SEQRES 39 A 604 VAL ALA PRO HIS ALA GLU THR ALA MET THR LEU SER ILE SEQRES 40 A 604 MET ARG GLU GLN ASP LYS ASN LEU TYR HIS ALA ASP GLN SEQRES 41 A 604 VAL ALA PRO LEU LEU VAL TYR LEU GLY THR ASP ASP VAL SEQRES 42 A 604 PRO VAL THR GLY GLU THR PHE GLU ILE GLY GLY GLY TRP SEQRES 43 A 604 ILE GLY ASN THR ARG TRP GLN ARG ALA LYS GLY ALA VAL SEQRES 44 A 604 SER HIS ASP GLU HIS THR THR VAL GLU PHE ILE LYS GLU SEQRES 45 A 604 HIS LEU ASN GLU ILE THR ASP PHE THR THR ASP THR GLU SEQRES 46 A 604 ASN PRO LYS SER THR THR GLU SER SER MET ALA ILE LEU SEQRES 47 A 604 SER ALA VAL GLY GLY ASP FORMUL 2 HOH *345(H2 O) HELIX 1 1 GLY A 18 LEU A 31 1 14 HELIX 2 2 LYS A 52 ASN A 64 1 13 HELIX 3 3 ASP A 77 GLY A 90 1 14 HELIX 4 4 THR A 111 LEU A 123 1 13 HELIX 5 5 LEU A 123 LYS A 141 1 19 HELIX 6 6 SER A 150 GLY A 156 1 7 HELIX 7 7 GLN A 160 ALA A 182 1 23 HELIX 8 8 SER A 197 SER A 202 1 6 HELIX 9 9 PRO A 205 GLU A 210 1 6 HELIX 10 10 GLY A 213 SER A 225 1 13 HELIX 11 11 THR A 263 LEU A 275 1 13 HELIX 12 12 PRO A 283 LYS A 287 5 5 HELIX 13 13 ASP A 296 ARG A 305 1 10 HELIX 14 14 ALA A 332 TYR A 345 1 14 HELIX 15 15 ALA A 357 ALA A 367 1 11 HELIX 16 16 ASP A 377 GLY A 394 1 18 HELIX 17 17 SER A 415 LEU A 427 1 13 HELIX 18 18 LEU A 427 LYS A 444 1 18 HELIX 19 19 SER A 454 TYR A 459 1 6 HELIX 20 20 GLN A 464 ALA A 486 1 23 HELIX 21 21 HIS A 517 GLN A 520 5 4 HELIX 22 22 VAL A 521 LEU A 528 1 8 HELIX 23 23 THR A 566 THR A 578 1 13 HELIX 24 24 SER A 589 GLY A 603 1 15 SHEET 1 A16 VAL A 67 ASP A 71 0 SHEET 2 A16 LYS A 34 ASN A 38 1 N VAL A 37 O VAL A 69 SHEET 3 A16 VAL A 10 ILE A 13 1 N VAL A 11 O LYS A 34 SHEET 4 A16 VAL A 94 ASN A 97 1 O ILE A 96 N ILE A 12 SHEET 5 A16 GLY A 143 THR A 148 1 O VAL A 146 N ASN A 97 SHEET 6 A16 ILE A 186 PRO A 193 1 O ASN A 189 N ASN A 147 SHEET 7 A16 PHE A 235 ALA A 239 1 O PHE A 236 N ALA A 192 SHEET 8 A16 PHE A 242 ARG A 250 -1 O ALA A 244 N GLU A 237 SHEET 9 A16 TRP A 546 ARG A 554 -1 O GLN A 553 N ARG A 247 SHEET 10 A16 THR A 539 GLY A 543 -1 N GLU A 541 O GLY A 548 SHEET 11 A16 ILE A 490 PRO A 497 1 N ALA A 496 O PHE A 540 SHEET 12 A16 GLY A 447 ILE A 452 1 N ILE A 449 O LYS A 491 SHEET 13 A16 ILE A 398 ASN A 401 1 N LEU A 399 O ILE A 450 SHEET 14 A16 VAL A 324 ILE A 327 1 N LEU A 326 O ILE A 398 SHEET 15 A16 LYS A 348 ASN A 352 1 O VAL A 350 N VAL A 325 SHEET 16 A16 GLU A 370 ASP A 374 1 O TRP A 372 N VAL A 351 SHEET 1 B 4 VAL A 254 LEU A 255 0 SHEET 2 B 4 TRP A 546 ARG A 554 -1 O ILE A 547 N VAL A 254 SHEET 3 B 4 PHE A 242 ARG A 250 -1 N ARG A 247 O GLN A 553 SHEET 4 B 4 ALA A 558 VAL A 559 -1 O ALA A 558 N TYR A 243 CRYST1 74.895 78.340 95.445 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013352 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012765 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010477 0.00000 MASTER 395 0 0 24 20 0 0 6 0 0 0 47 END