HEADER PROTEIN BINDING 30-MAR-07 2EQU TITLE SOLUTION STRUCTURE OF THE TUDOR DOMAIN OF PHD FINGER TITLE 2 PROTEIN 20-LIKE 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHD FINGER PROTEIN 20-LIKE 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: TUDOR DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PHF20L1; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P060911-17; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS TUDOR DOMAIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT KEYWDS 2 ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, PROTEIN KEYWDS 4 BINDING EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.FUTAMI,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, AUTHOR 2 M.SHIROUZU,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 3 INITIATIVE (RSGI) REVDAT 2 24-FEB-09 2EQU 1 VERSN REVDAT 1 02-OCT-07 2EQU 0 JRNL AUTH K.FUTAMI,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, JRNL AUTH 2 M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE TUDOR DOMAIN OF PHD JRNL TITL 2 FINGER PROTEIN 20-LIKE 1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AMBER 9 REMARK 3 AUTHORS : DAVID,A,CASE. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EQU COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-JUN-07. REMARK 100 THE RCSB ID CODE IS RCSB026994. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.17MM 13C-15N PROTEIN; 20MM REMARK 210 D-TRIS-HCL(PH7.0); 100MM NACL; REMARK 210 1MM D-DTT; 0.02% NAN3; 90% REMARK 210 H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20060702, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYANAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, REMARK 210 STRUCTURES WITH THE LOWEST REMARK 210 ENERGY, TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 79 26.90 47.78 REMARK 500 1 SER A 80 10.37 -148.58 REMARK 500 1 SER A 82 30.25 -155.90 REMARK 500 1 PHE A 85 8.65 -152.22 REMARK 500 1 TRP A 97 -162.98 -121.71 REMARK 500 1 ASN A 111 5.31 53.75 REMARK 500 1 GLU A 113 43.02 -140.02 REMARK 500 1 LYS A 141 -40.37 -131.24 REMARK 500 2 TRP A 97 -150.09 -136.91 REMARK 500 2 THR A 115 -169.19 -162.36 REMARK 500 3 TRP A 97 -36.13 -144.92 REMARK 500 3 LYS A 112 89.22 -29.62 REMARK 500 3 GLU A 113 40.33 38.39 REMARK 500 3 ALA A 140 153.86 -49.28 REMARK 500 3 ASP A 144 36.47 -148.95 REMARK 500 3 TRP A 145 46.67 -69.23 REMARK 500 3 LEU A 148 32.39 -79.90 REMARK 500 4 TRP A 145 13.81 -141.59 REMARK 500 5 TRP A 97 -44.13 -140.23 REMARK 500 5 GLU A 113 35.43 -142.91 REMARK 500 5 TRP A 145 31.77 -69.95 REMARK 500 5 LEU A 148 0.75 -67.60 REMARK 500 6 TRP A 97 -48.02 -138.89 REMARK 500 6 THR A 98 -14.55 -140.27 REMARK 500 6 LYS A 112 -175.86 -67.24 REMARK 500 6 TRP A 145 36.06 -78.13 REMARK 500 7 THR A 98 -29.17 -155.25 REMARK 500 7 GLU A 113 24.33 -140.63 REMARK 500 7 GLN A 143 1.21 -59.61 REMARK 500 7 TRP A 145 7.84 44.86 REMARK 500 8 TRP A 97 -39.77 -151.42 REMARK 500 8 THR A 98 -32.68 -132.73 REMARK 500 8 ASN A 111 11.32 53.35 REMARK 500 8 GLU A 113 49.77 -142.09 REMARK 500 8 TRP A 145 -12.14 -142.51 REMARK 500 9 CYS A 100 34.78 -74.04 REMARK 500 9 MET A 131 2.61 -69.16 REMARK 500 9 LEU A 148 2.84 -65.53 REMARK 500 10 SER A 80 42.60 -80.61 REMARK 500 10 TRP A 97 -42.51 -142.74 REMARK 500 10 ASN A 111 18.51 51.51 REMARK 500 10 MET A 131 -7.33 -59.31 REMARK 500 10 LEU A 148 23.24 -152.24 REMARK 500 11 TRP A 97 -159.70 -93.75 REMARK 500 11 ALA A 140 89.79 -46.84 REMARK 500 11 LYS A 141 27.24 45.81 REMARK 500 11 TRP A 145 38.92 -81.78 REMARK 500 11 ILE A 146 -149.06 -85.93 REMARK 500 11 ALA A 147 48.32 -72.02 REMARK 500 12 THR A 98 -56.50 -142.41 REMARK 500 12 ASN A 111 -50.93 -132.47 REMARK 500 12 ALA A 140 37.52 -71.68 REMARK 500 12 GLN A 143 42.52 38.13 REMARK 500 12 LEU A 148 29.98 -74.85 REMARK 500 12 LYS A 150 14.71 -145.58 REMARK 500 13 TRP A 97 -44.23 -146.72 REMARK 500 13 ASN A 111 16.10 47.64 REMARK 500 13 GLU A 138 106.39 -51.57 REMARK 500 13 TRP A 145 -21.16 -140.98 REMARK 500 14 ASP A 86 54.66 -141.33 REMARK 500 14 TRP A 97 -47.51 -138.39 REMARK 500 14 THR A 98 -29.36 -142.95 REMARK 500 14 ASN A 111 14.52 51.71 REMARK 500 14 ALA A 140 -34.46 -135.31 REMARK 500 14 ASP A 144 12.65 53.65 REMARK 500 15 LYS A 112 -154.50 -70.34 REMARK 500 15 ALA A 140 -38.67 -159.61 REMARK 500 15 TRP A 145 26.67 -73.32 REMARK 500 16 SER A 82 38.88 -158.55 REMARK 500 16 TRP A 97 -30.53 -143.73 REMARK 500 16 LYS A 141 30.77 -72.37 REMARK 500 16 ILE A 146 -5.49 -59.81 REMARK 500 17 TRP A 97 -44.46 -143.83 REMARK 500 17 THR A 98 -5.15 -142.20 REMARK 500 17 ASN A 111 -5.44 50.33 REMARK 500 17 ALA A 140 45.82 -82.84 REMARK 500 18 PHE A 85 14.73 47.61 REMARK 500 18 TRP A 97 -40.39 -134.05 REMARK 500 18 THR A 98 -51.00 -159.36 REMARK 500 18 CYS A 100 43.54 -73.38 REMARK 500 18 GLU A 113 43.60 39.28 REMARK 500 19 CYS A 100 33.80 -72.57 REMARK 500 19 LYS A 112 101.60 -42.31 REMARK 500 19 GLU A 113 17.26 54.31 REMARK 500 19 ALA A 140 72.88 -60.82 REMARK 500 19 TRP A 145 16.59 -144.39 REMARK 500 20 SER A 80 46.62 -73.42 REMARK 500 20 TRP A 97 -38.89 -132.99 REMARK 500 20 THR A 98 -32.03 -157.60 REMARK 500 20 CYS A 100 39.77 -73.22 REMARK 500 20 ASN A 111 110.86 -163.65 REMARK 500 20 ILE A 146 -177.65 -68.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSO003013074.2 RELATED DB: TARGETDB DBREF 2EQU A 85 151 UNP Q96BT0 Q96BT0_HUMAN 85 151 SEQADV 2EQU GLY A 78 UNP Q96BT0 EXPRESSION TAG SEQADV 2EQU SER A 79 UNP Q96BT0 EXPRESSION TAG SEQADV 2EQU SER A 80 UNP Q96BT0 EXPRESSION TAG SEQADV 2EQU GLY A 81 UNP Q96BT0 EXPRESSION TAG SEQADV 2EQU SER A 82 UNP Q96BT0 EXPRESSION TAG SEQADV 2EQU SER A 83 UNP Q96BT0 EXPRESSION TAG SEQADV 2EQU GLY A 84 UNP Q96BT0 EXPRESSION TAG SEQRES 1 A 74 GLY SER SER GLY SER SER GLY PHE ASP PHE LYS ALA GLY SEQRES 2 A 74 GLU GLU VAL LEU ALA ARG TRP THR ASP CYS ARG TYR TYR SEQRES 3 A 74 PRO ALA LYS ILE GLU ALA ILE ASN LYS GLU GLY THR PHE SEQRES 4 A 74 THR VAL GLN PHE TYR ASP GLY VAL ILE ARG CYS LEU LYS SEQRES 5 A 74 ARG MET HIS ILE LYS ALA MET PRO GLU ASP ALA LYS GLY SEQRES 6 A 74 GLN ASP TRP ILE ALA LEU VAL LYS ALA HELIX 1 1 LYS A 129 MET A 131 5 3 HELIX 2 2 PRO A 137 LYS A 141 5 5 SHEET 1 A 5 ILE A 125 LEU A 128 0 SHEET 2 A 5 PHE A 116 PHE A 120 -1 N PHE A 116 O LEU A 128 SHEET 3 A 5 TYR A 102 ILE A 110 -1 N GLU A 108 O THR A 117 SHEET 4 A 5 GLU A 92 ARG A 96 -1 N VAL A 93 O ALA A 105 SHEET 5 A 5 ILE A 133 LYS A 134 -1 O LYS A 134 N LEU A 94 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 167 0 0 2 5 0 0 6 0 0 0 6 END