HEADER HYDROLASE 30-MAR-07 2EQE TITLE SOLUTION STRUCTURE OF THE FOURTH A20-TYPE ZINC FINGER TITLE 2 DOMAIN FROM HUMAN TUMOR NECROSIS FACTOR, ALPHA-INDUCED TITLE 3 PROTEIN3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TUMOR NECROSIS FACTOR, ALPHA-INDUCED PROTEIN 3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: A20-TYPE ZINC FINGER DOMAIN; COMPND 5 SYNONYM: PUTATIVE DNA-BINDING PROTEIN A20, ZINC FINGER COMPND 6 PROTEIN A20; COMPND 7 EC: 3.-.-.-; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TNFAIP3; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P070115-06; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS ZF-A20 DOMAIN, TUMOR NECROSIS FACTOR, ALPHA-INDUCED PROTEIN KEYWDS 2 3, PUTATIVE DNA-BINDING PROTEIN A20, ZINC FINGER PROTEIN KEYWDS 3 A20, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON KEYWDS 4 PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 5 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, HYDROLASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.P.ZHANG,T.NAGASIMA,F.HAYAHSI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 2 24-FEB-09 2EQE 1 VERSN REVDAT 1 02-OCT-07 2EQE 0 JRNL AUTH H.P.ZHANG,T.NAGASIMA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE FOURTH A20-TYPE ZINC JRNL TITL 2 FINGER DOMAIN FROM HUMAN TUMOR NECROSIS FACTOR, JRNL TITL 3 ALPHA-INDUCED PROTEIN3 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EQE COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-JUN-07. REMARK 100 THE RCSB ID CODE IS RCSB026979. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.16MM 13C, 15N-LABELED REMARK 210 PROTEIN; 20MM D-TRIS-HCL PH REMARK 210 7.0); 100MM NACL; 1MM D-DTT; REMARK 210 0.02% NAN3; 50MM ZNCL2, 1MM REMARK 210 IDA; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, NMRPIPE 20031121, REMARK 210 NMRVIEW 5.0.4, KUJIRA 0.9818, REMARK 210 CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, REMARK 210 TRUCTURES WITH THE LOWEST REMARK 210 ENERGY, ARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 2 PRO A 45 2.65 -69.72 REMARK 500 3 CYS A 23 102.42 -53.28 REMARK 500 3 PHE A 34 176.61 -59.66 REMARK 500 4 PRO A 9 93.17 -69.82 REMARK 500 4 TYR A 25 173.08 -52.18 REMARK 500 5 PRO A 9 -178.98 -69.76 REMARK 500 6 TYR A 25 178.00 -53.85 REMARK 500 6 PRO A 45 2.52 -69.80 REMARK 500 7 SER A 5 -26.14 -39.93 REMARK 500 7 TYR A 25 177.25 -59.79 REMARK 500 7 PRO A 45 92.76 -69.76 REMARK 500 8 TYR A 25 177.93 -55.96 REMARK 500 8 PRO A 45 87.54 -69.73 REMARK 500 9 TYR A 25 174.16 -55.81 REMARK 500 10 PRO A 9 -179.64 -69.72 REMARK 500 10 PRO A 45 89.76 -69.80 REMARK 500 11 PRO A 9 86.68 -69.72 REMARK 500 11 CYS A 23 102.48 -55.55 REMARK 500 11 PRO A 45 3.45 -69.78 REMARK 500 12 SER A 5 177.11 -53.75 REMARK 500 12 PRO A 9 2.81 -69.74 REMARK 500 12 TYR A 25 175.45 -53.06 REMARK 500 13 PRO A 9 2.28 -69.74 REMARK 500 13 THR A 15 -61.17 -94.75 REMARK 500 13 SER A 43 -68.10 -96.58 REMARK 500 14 PRO A 9 2.98 -69.77 REMARK 500 14 TYR A 25 170.62 -57.78 REMARK 500 15 PRO A 9 -173.04 -69.75 REMARK 500 16 TYR A 25 172.60 -52.24 REMARK 500 17 PRO A 9 98.01 -69.84 REMARK 500 17 THR A 13 -29.11 -37.52 REMARK 500 17 TYR A 25 173.84 -59.23 REMARK 500 19 PRO A 9 3.22 -69.77 REMARK 500 19 PHE A 39 -28.12 -36.85 REMARK 500 20 PHE A 34 173.96 -59.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 18 SG REMARK 620 2 CYS A 23 SG 113.9 REMARK 620 3 CYS A 35 SG 111.6 104.5 REMARK 620 4 CYS A 38 SG 112.8 105.4 108.1 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK003100168.2 RELATED DB: TARGETDB DBREF 2EQE A 8 42 UNP P21580 TNAP3_HUMAN 597 631 SEQADV 2EQE GLY A 1 UNP P21580 EXPRESSION TAG SEQADV 2EQE SER A 2 UNP P21580 EXPRESSION TAG SEQADV 2EQE SER A 3 UNP P21580 EXPRESSION TAG SEQADV 2EQE GLY A 4 UNP P21580 EXPRESSION TAG SEQADV 2EQE SER A 5 UNP P21580 EXPRESSION TAG SEQADV 2EQE SER A 6 UNP P21580 EXPRESSION TAG SEQADV 2EQE GLY A 7 UNP P21580 EXPRESSION TAG SEQADV 2EQE SER A 43 UNP P21580 EXPRESSION TAG SEQADV 2EQE GLY A 44 UNP P21580 EXPRESSION TAG SEQADV 2EQE PRO A 45 UNP P21580 EXPRESSION TAG SEQADV 2EQE SER A 46 UNP P21580 EXPRESSION TAG SEQADV 2EQE SER A 47 UNP P21580 EXPRESSION TAG SEQADV 2EQE GLY A 48 UNP P21580 EXPRESSION TAG SEQRES 1 A 48 GLY SER SER GLY SER SER GLY THR PRO GLY ASP ARG THR SEQRES 2 A 48 GLY THR SER LYS CYS ARG LYS ALA GLY CYS VAL TYR PHE SEQRES 3 A 48 GLY THR PRO GLU ASN LYS GLY PHE CYS THR LEU CYS PHE SEQRES 4 A 48 ILE GLU TYR SER GLY PRO SER SER GLY HET ZN A 201 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ HELIX 1 1 CYS A 35 GLY A 44 1 10 LINK SG CYS A 18 ZN ZN A 201 1555 1555 2.26 LINK SG CYS A 23 ZN ZN A 201 1555 1555 2.32 LINK SG CYS A 35 ZN ZN A 201 1555 1555 2.32 LINK SG CYS A 38 ZN ZN A 201 1555 1555 2.29 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 123 0 1 1 0 0 0 6 0 0 0 4 END