HEADER TRANSCRIPTION 30-MAR-07 2EPP TITLE SOLUTION STRUCTURE OF THE FIRST C2H2 TYPE ZINC FINGER TITLE 2 DOMAIN OF ZINC FINGER PROTEIN 278 COMPND MOL_ID: 1; COMPND 2 MOLECULE: POZ-, AT HOOK-, AND ZINC FINGER-CONTAINING COMPND 3 PROTEIN 1; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: ZINC FINGER DOMAIN; COMPND 6 SYNONYM: ZINC FINGER PROTEIN 278, ZINC FINGER SARCOMA GENE COMPND 7 PROTEIN, BTB-POZ DOMAIN ZINC FINGER TRANSCRIPTION FACTOR, COMPND 8 PROTEIN KINASE A RI-SUBUNIT ALPHA- ASSOCIATED PROTEIN, COMPND 9 ZINC FINGER AND BTB DOMAIN-CONTAINING PROTEIN 19; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PATZ1, PATZ, RIAZ, ZBTB19, ZNF278, ZSG; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P061204-01; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS C2H2, ZINC FINGER DOMAIN, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, KEYWDS 4 RSGI, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR W.TANABE,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, AUTHOR 2 M.SHIROUZU,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 3 INITIATIVE (RSGI) REVDAT 2 24-FEB-09 2EPP 1 VERSN REVDAT 1 12-FEB-08 2EPP 0 JRNL AUTH W.TANABE,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, JRNL AUTH 2 M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE FIRST C2H2 TYPE ZINC JRNL TITL 2 FINGER DOMAIN OF ZINC FINGER PROTEIN 278 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT,P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EPP COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-JUN-07. REMARK 100 THE RCSB ID CODE IS RCSB026954. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.89MM 13C-15N PROTEIN, 20MM REMARK 210 D-TRIS-HCL(PH7.0), 100MM NACL, REMARK 210 1MM D-DTT, 0.02% NAN3, 90% REMARK 210 H2O, 10% D2O, 0.05MM ZNCL2, REMARK 210 1MM IDA REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20060702, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 2.1 REMARK 210 METHOD USED : TORSION ANGLE DYANAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, REMARK 210 STRUCTURES WITH THE LOWEST REMARK 210 ENERGY, TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 289 -73.97 -86.41 REMARK 500 1 LEU A 296 -42.36 -130.07 REMARK 500 1 PRO A 337 -173.12 -69.76 REMARK 500 1 SER A 342 64.78 -107.45 REMARK 500 2 ALA A 289 65.49 -117.36 REMARK 500 2 CYS A 294 109.64 -52.02 REMARK 500 2 LEU A 296 -44.41 -134.23 REMARK 500 2 LEU A 326 73.31 55.54 REMARK 500 2 ASN A 334 116.57 -163.33 REMARK 500 2 PRO A 337 99.54 -69.72 REMARK 500 3 LEU A 296 -40.72 -131.68 REMARK 500 3 THR A 317 109.65 -55.05 REMARK 500 4 SER A 280 110.86 -169.04 REMARK 500 4 THR A 317 103.33 -59.99 REMARK 500 4 GLN A 320 109.78 -53.31 REMARK 500 4 ASN A 334 144.60 -174.11 REMARK 500 5 THR A 302 -44.07 -134.42 REMARK 500 5 LEU A 326 73.30 -154.01 REMARK 500 6 PRO A 337 98.59 -69.79 REMARK 500 6 PRO A 341 98.85 -69.72 REMARK 500 7 SER A 283 114.02 -175.03 REMARK 500 7 ARG A 287 36.70 -96.93 REMARK 500 7 VAL A 316 79.23 59.10 REMARK 500 7 LEU A 326 154.62 64.24 REMARK 500 8 LEU A 296 -49.21 -132.30 REMARK 500 8 SER A 318 91.67 -66.03 REMARK 500 8 LEU A 319 -41.80 -137.35 REMARK 500 8 ASP A 325 38.88 -97.35 REMARK 500 8 ASN A 334 41.99 -103.97 REMARK 500 8 PRO A 341 91.16 -69.80 REMARK 500 9 CYS A 294 107.84 -56.18 REMARK 500 9 LEU A 296 -44.42 -132.67 REMARK 500 9 LEU A 326 73.41 -114.38 REMARK 500 10 LEU A 319 66.45 -104.77 REMARK 500 10 LEU A 326 73.17 -150.27 REMARK 500 10 PRO A 337 -174.19 -69.73 REMARK 500 11 LEU A 326 71.42 -158.53 REMARK 500 12 SER A 284 87.75 -68.55 REMARK 500 12 ALA A 289 91.88 -66.15 REMARK 500 12 LEU A 326 70.20 -119.93 REMARK 500 12 PRO A 329 99.62 -69.73 REMARK 500 13 GLN A 320 101.63 -55.10 REMARK 500 13 LEU A 331 57.13 -93.90 REMARK 500 13 PRO A 341 -175.01 -69.75 REMARK 500 14 ARG A 287 -55.90 -121.62 REMARK 500 14 LEU A 326 72.33 -165.66 REMARK 500 15 LEU A 326 71.52 58.23 REMARK 500 15 PRO A 337 91.97 -69.73 REMARK 500 16 SER A 283 -50.19 -131.99 REMARK 500 16 LEU A 286 59.74 -91.55 REMARK 500 16 VAL A 316 -71.80 -78.32 REMARK 500 16 PRO A 329 95.63 -69.79 REMARK 500 16 LEU A 336 154.66 64.20 REMARK 500 18 ARG A 287 110.37 -174.05 REMARK 500 18 CYS A 294 107.69 -52.09 REMARK 500 18 LEU A 296 -42.23 -131.39 REMARK 500 18 GLN A 320 73.55 -113.55 REMARK 500 18 LEU A 326 73.36 61.01 REMARK 500 19 SER A 284 110.47 -171.96 REMARK 500 19 ARG A 287 43.42 -106.05 REMARK 500 19 LEU A 326 69.07 -119.48 REMARK 500 20 LEU A 326 70.87 54.77 REMARK 500 20 ARG A 330 64.36 -112.67 REMARK 500 20 LEU A 331 59.50 -105.66 REMARK 500 20 LEU A 336 154.13 64.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 294 SG REMARK 620 2 CYS A 297 SG 106.7 REMARK 620 3 HIS A 310 NE2 110.7 107.4 REMARK 620 4 HIS A 314 NE2 114.9 113.8 103.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSI002013231.3 RELATED DB: TARGETDB DBREF 2EPP A 286 338 UNP Q9HBE1 PATZ1_HUMAN 286 338 SEQADV 2EPP GLY A 279 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPP SER A 280 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPP SER A 281 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPP GLY A 282 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPP SER A 283 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPP SER A 284 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPP GLY A 285 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPP SER A 339 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPP GLY A 340 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPP PRO A 341 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPP SER A 342 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPP SER A 343 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPP GLY A 344 UNP Q9HBE1 EXPRESSION TAG SEQRES 1 A 66 GLY SER SER GLY SER SER GLY LEU ARG GLU ALA GLY ILE SEQRES 2 A 66 LEU PRO CYS GLY LEU CYS GLY LYS VAL PHE THR ASP ALA SEQRES 3 A 66 ASN ARG LEU ARG GLN HIS GLU ALA GLN HIS GLY VAL THR SEQRES 4 A 66 SER LEU GLN LEU GLY TYR ILE ASP LEU PRO PRO PRO ARG SEQRES 5 A 66 LEU GLY GLU ASN GLY LEU PRO ILE SER GLY PRO SER SER SEQRES 6 A 66 GLY HET ZN A 201 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ HELIX 1 1 ASP A 303 GLY A 315 1 13 LINK SG CYS A 294 ZN ZN A 201 1555 1555 2.29 LINK SG CYS A 297 ZN ZN A 201 1555 1555 2.23 LINK NE2 HIS A 310 ZN ZN A 201 1555 1555 1.95 LINK NE2 HIS A 314 ZN ZN A 201 1555 1555 1.96 SITE 1 AC1 4 CYS A 294 CYS A 297 HIS A 310 HIS A 314 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 159 0 1 1 0 0 1 6 0 0 0 6 END