HEADER TRANSCRIPTION 22-MAR-07 2EK5 TITLE CRYSTAL STRUCTURE OF THE TRANSCRIPTIONAL FACTOR FROM C.GLUTAMICUM AT TITLE 2 2.2 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PREDICTED TRANSCRIPTIONAL REGULATORS; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: TRANSCRIPTION FACTOR, BACTERIAL REGULATORY PROTEIN, GNTR COMPND 5 FAMILY; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM GLUTAMICUM ATCC 13032; SOURCE 3 ORGANISM_TAXID: 196627; SOURCE 4 STRAIN: ATCC13032; SOURCE 5 GENE: CGL2947; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B834(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET26(B) KEYWDS HELIX-TURN-HELIX, INTERWINED ALPHA HELICES, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR Y.G.GAO,M.YAO,I.TANAKA REVDAT 4 09-SEP-20 2EK5 1 TITLE SEQADV LINK REVDAT 3 13-JUL-11 2EK5 1 VERSN REVDAT 2 24-FEB-09 2EK5 1 VERSN REVDAT 1 18-SEP-07 2EK5 0 JRNL AUTH Y.G.GAO,M.YAO,H.ITOU,Y.ZHOU,I.TANAKA JRNL TITL THE STRUCTURES OF TRANSCRIPTION FACTOR CGL2947 FROM JRNL TITL 2 CORYNEBACTERIUM GLUTAMICUM IN TWO CRYSTAL FORMS: A NOVEL JRNL TITL 3 HOMODIMER ASSEMBLING AND THE IMPLICATION FOR JRNL TITL 4 EFFECTOR-BINDING MODE JRNL REF PROTEIN SCI. V. 16 1878 2007 JRNL REFN ISSN 0961-8368 JRNL PMID 17766384 JRNL DOI 10.1110/PS.072976907 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 9.9 REMARK 3 NUMBER OF REFLECTIONS : 23916 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2376 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.28 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2688 REMARK 3 BIN FREE R VALUE : 0.2947 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 218 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3512 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 226 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.76 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.45200 REMARK 3 B22 (A**2) : 0.72600 REMARK 3 B33 (A**2) : 5.73200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.28 REMARK 3 ESD FROM SIGMAA (A) : 0.22 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.31 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.26 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EK5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-MAY-07. REMARK 100 THE DEPOSITION ID IS D_1000026763. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-NOV-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23916 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 48.622 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : 0.07500 REMARK 200 FOR THE DATA SET : 13.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.29900 REMARK 200 R SYM FOR SHELL (I) : 0.29900 REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M IMIDAZOLE PH8.0, 15% ETOH, 0.2M REMARK 280 MGCL2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 91.07600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 91.07600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 34.31900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.24700 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 34.31900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.24700 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 91.07600 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 34.31900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 37.24700 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 91.07600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 34.31900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 37.24700 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CHAIN A AND CHAIN B, CHAIN C AND CHAIN D IN AN ASYMMETRIC REMARK 300 UNIT FORM TWO HOMODIMERS, RESPECTIVELY. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 148.98800 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 182.15200 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -68.63800 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 91.07600 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 GLY A 118 REMARK 465 LEU A 119 REMARK 465 TYR A 120 REMARK 465 LYS A 121 REMARK 465 LEU A 122 REMARK 465 GLU A 123 REMARK 465 HIS A 124 REMARK 465 HIS A 125 REMARK 465 HIS A 126 REMARK 465 HIS A 127 REMARK 465 HIS A 128 REMARK 465 HIS A 129 REMARK 465 MSE B 1 REMARK 465 THR B 2 REMARK 465 VAL B 3 REMARK 465 PRO B 4 REMARK 465 LEU B 5 REMARK 465 TYR B 6 REMARK 465 LYS B 7 REMARK 465 GLN B 8 REMARK 465 ILE B 9 REMARK 465 LEU B 119 REMARK 465 TYR B 120 REMARK 465 LYS B 121 REMARK 465 LEU B 122 REMARK 465 GLU B 123 REMARK 465 HIS B 124 REMARK 465 HIS B 125 REMARK 465 HIS B 126 REMARK 465 HIS B 127 REMARK 465 HIS B 128 REMARK 465 HIS B 129 REMARK 465 MSE C 1 REMARK 465 THR C 2 REMARK 465 LYS C 121 REMARK 465 LEU C 122 REMARK 465 GLU C 123 REMARK 465 HIS C 124 REMARK 465 HIS C 125 REMARK 465 HIS C 126 REMARK 465 HIS C 127 REMARK 465 HIS C 128 REMARK 465 HIS C 129 REMARK 465 MSE D 1 REMARK 465 THR D 2 REMARK 465 GLY D 118 REMARK 465 LEU D 119 REMARK 465 TYR D 120 REMARK 465 LYS D 121 REMARK 465 LEU D 122 REMARK 465 GLU D 123 REMARK 465 HIS D 124 REMARK 465 HIS D 125 REMARK 465 HIS D 126 REMARK 465 HIS D 127 REMARK 465 HIS D 128 REMARK 465 HIS D 129 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 27 OE1 GLU A 33 1.98 REMARK 500 O HOH A 131 O HOH A 135 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 27 CG - CD - NE ANGL. DEV. = -21.9 DEGREES REMARK 500 ARG A 27 NE - CZ - NH1 ANGL. DEV. = -5.9 DEGREES REMARK 500 ARG A 27 NE - CZ - NH2 ANGL. DEV. = 4.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 62 121.82 -36.17 REMARK 500 GLU B 115 100.97 -54.52 REMARK 500 SER B 116 50.37 94.90 REMARK 500 ARG B 117 -164.50 -46.22 REMARK 500 ARG C 62 119.67 -34.62 REMARK 500 SER D 23 -159.97 -122.01 REMARK 500 ARG D 62 131.04 -33.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2DU9 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH MPD DBREF 2EK5 A 1 121 UNP Q8NLJ5 Q8NLJ5_CORGL 1 121 DBREF 2EK5 B 1 121 UNP Q8NLJ5 Q8NLJ5_CORGL 1 121 DBREF 2EK5 C 1 121 UNP Q8NLJ5 Q8NLJ5_CORGL 1 121 DBREF 2EK5 D 1 121 UNP Q8NLJ5 Q8NLJ5_CORGL 1 121 SEQADV 2EK5 LEU A 122 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 GLU A 123 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS A 124 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS A 125 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS A 126 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS A 127 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS A 128 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS A 129 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 LEU B 122 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 GLU B 123 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS B 124 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS B 125 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS B 126 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS B 127 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS B 128 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS B 129 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 LEU C 122 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 GLU C 123 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS C 124 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS C 125 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS C 126 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS C 127 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS C 128 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS C 129 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 LEU D 122 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 GLU D 123 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS D 124 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS D 125 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS D 126 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS D 127 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS D 128 UNP Q8NLJ5 EXPRESSION TAG SEQADV 2EK5 HIS D 129 UNP Q8NLJ5 EXPRESSION TAG SEQRES 1 A 129 MSE THR VAL PRO LEU TYR LYS GLN ILE ALA SER LEU ILE SEQRES 2 A 129 GLU ASP SER ILE VAL ASP GLY THR LEU SER ILE ASP GLN SEQRES 3 A 129 ARG VAL PRO SER THR ASN GLU LEU ALA ALA PHE HIS ARG SEQRES 4 A 129 ILE ASN PRO ALA THR ALA ARG ASN GLY LEU THR LEU LEU SEQRES 5 A 129 VAL GLU ALA GLY ILE LEU TYR LYS LYS ARG GLY ILE GLY SEQRES 6 A 129 MSE PHE VAL SER ALA GLN ALA PRO ALA LEU ILE ARG GLU SEQRES 7 A 129 ARG ARG ASP ALA ALA PHE ALA ALA THR TYR VAL ALA PRO SEQRES 8 A 129 LEU ILE ASP GLU SER ILE HIS LEU GLY PHE THR ARG ALA SEQRES 9 A 129 ARG ILE HIS ALA LEU LEU ASP GLN VAL ALA GLU SER ARG SEQRES 10 A 129 GLY LEU TYR LYS LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 129 MSE THR VAL PRO LEU TYR LYS GLN ILE ALA SER LEU ILE SEQRES 2 B 129 GLU ASP SER ILE VAL ASP GLY THR LEU SER ILE ASP GLN SEQRES 3 B 129 ARG VAL PRO SER THR ASN GLU LEU ALA ALA PHE HIS ARG SEQRES 4 B 129 ILE ASN PRO ALA THR ALA ARG ASN GLY LEU THR LEU LEU SEQRES 5 B 129 VAL GLU ALA GLY ILE LEU TYR LYS LYS ARG GLY ILE GLY SEQRES 6 B 129 MSE PHE VAL SER ALA GLN ALA PRO ALA LEU ILE ARG GLU SEQRES 7 B 129 ARG ARG ASP ALA ALA PHE ALA ALA THR TYR VAL ALA PRO SEQRES 8 B 129 LEU ILE ASP GLU SER ILE HIS LEU GLY PHE THR ARG ALA SEQRES 9 B 129 ARG ILE HIS ALA LEU LEU ASP GLN VAL ALA GLU SER ARG SEQRES 10 B 129 GLY LEU TYR LYS LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 129 MSE THR VAL PRO LEU TYR LYS GLN ILE ALA SER LEU ILE SEQRES 2 C 129 GLU ASP SER ILE VAL ASP GLY THR LEU SER ILE ASP GLN SEQRES 3 C 129 ARG VAL PRO SER THR ASN GLU LEU ALA ALA PHE HIS ARG SEQRES 4 C 129 ILE ASN PRO ALA THR ALA ARG ASN GLY LEU THR LEU LEU SEQRES 5 C 129 VAL GLU ALA GLY ILE LEU TYR LYS LYS ARG GLY ILE GLY SEQRES 6 C 129 MSE PHE VAL SER ALA GLN ALA PRO ALA LEU ILE ARG GLU SEQRES 7 C 129 ARG ARG ASP ALA ALA PHE ALA ALA THR TYR VAL ALA PRO SEQRES 8 C 129 LEU ILE ASP GLU SER ILE HIS LEU GLY PHE THR ARG ALA SEQRES 9 C 129 ARG ILE HIS ALA LEU LEU ASP GLN VAL ALA GLU SER ARG SEQRES 10 C 129 GLY LEU TYR LYS LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 D 129 MSE THR VAL PRO LEU TYR LYS GLN ILE ALA SER LEU ILE SEQRES 2 D 129 GLU ASP SER ILE VAL ASP GLY THR LEU SER ILE ASP GLN SEQRES 3 D 129 ARG VAL PRO SER THR ASN GLU LEU ALA ALA PHE HIS ARG SEQRES 4 D 129 ILE ASN PRO ALA THR ALA ARG ASN GLY LEU THR LEU LEU SEQRES 5 D 129 VAL GLU ALA GLY ILE LEU TYR LYS LYS ARG GLY ILE GLY SEQRES 6 D 129 MSE PHE VAL SER ALA GLN ALA PRO ALA LEU ILE ARG GLU SEQRES 7 D 129 ARG ARG ASP ALA ALA PHE ALA ALA THR TYR VAL ALA PRO SEQRES 8 D 129 LEU ILE ASP GLU SER ILE HIS LEU GLY PHE THR ARG ALA SEQRES 9 D 129 ARG ILE HIS ALA LEU LEU ASP GLN VAL ALA GLU SER ARG SEQRES 10 D 129 GLY LEU TYR LYS LEU GLU HIS HIS HIS HIS HIS HIS MODRES 2EK5 MSE A 66 MET SELENOMETHIONINE MODRES 2EK5 MSE B 66 MET SELENOMETHIONINE MODRES 2EK5 MSE C 66 MET SELENOMETHIONINE MODRES 2EK5 MSE D 66 MET SELENOMETHIONINE HET MSE A 66 8 HET MSE B 66 8 HET MSE C 66 8 HET MSE D 66 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 5 HOH *226(H2 O) HELIX 1 1 PRO A 4 ASP A 19 1 16 HELIX 2 2 SER A 30 HIS A 38 1 9 HELIX 3 3 ASN A 41 GLU A 54 1 14 HELIX 4 4 GLN A 71 VAL A 89 1 19 HELIX 5 5 VAL A 89 GLY A 100 1 12 HELIX 6 6 THR A 102 SER A 116 1 15 HELIX 7 7 ALA B 10 ASP B 19 1 10 HELIX 8 8 SER B 30 ARG B 39 1 10 HELIX 9 9 ASN B 41 ALA B 55 1 15 HELIX 10 10 GLN B 71 TYR B 88 1 18 HELIX 11 11 TYR B 88 GLY B 100 1 13 HELIX 12 12 THR B 102 GLU B 115 1 14 HELIX 13 13 PRO C 4 ASP C 19 1 16 HELIX 14 14 SER C 30 ARG C 39 1 10 HELIX 15 15 ASN C 41 ALA C 55 1 15 HELIX 16 16 GLN C 71 TYR C 88 1 18 HELIX 17 17 TYR C 88 LEU C 99 1 12 HELIX 18 18 THR C 102 ARG C 117 1 16 HELIX 19 19 PRO D 4 ASP D 19 1 16 HELIX 20 20 SER D 30 ARG D 39 1 10 HELIX 21 21 ASN D 41 ALA D 55 1 15 HELIX 22 22 GLN D 71 VAL D 89 1 19 HELIX 23 23 VAL D 89 GLY D 100 1 12 HELIX 24 24 THR D 102 SER D 116 1 15 SHEET 1 A 2 LEU A 58 LYS A 61 0 SHEET 2 A 2 GLY A 65 VAL A 68 -1 O GLY A 65 N LYS A 61 SHEET 1 B 2 LEU B 58 LYS B 61 0 SHEET 2 B 2 GLY B 65 VAL B 68 -1 O PHE B 67 N TYR B 59 SHEET 1 C 2 LEU C 58 LYS C 61 0 SHEET 2 C 2 GLY C 65 VAL C 68 -1 O PHE C 67 N TYR C 59 SHEET 1 D 2 LEU D 58 LYS D 61 0 SHEET 2 D 2 GLY D 65 VAL D 68 -1 O GLY D 65 N LYS D 61 LINK C GLY A 65 N MSE A 66 1555 1555 1.33 LINK C MSE A 66 N PHE A 67 1555 1555 1.33 LINK C GLY B 65 N MSE B 66 1555 1555 1.33 LINK C MSE B 66 N PHE B 67 1555 1555 1.33 LINK C GLY C 65 N MSE C 66 1555 1555 1.33 LINK C MSE C 66 N PHE C 67 1555 1555 1.33 LINK C GLY D 65 N MSE D 66 1555 1555 1.33 LINK C MSE D 66 N PHE D 67 1555 1555 1.33 CRYST1 68.638 74.494 182.152 90.00 90.00 90.00 C 2 2 21 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014569 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013424 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005490 0.00000 MASTER 391 0 4 24 8 0 0 6 0 0 0 40 END