HEADER METAL BINDING PROTEIN 15-FEB-07 2EEJ TITLE SOLUTION STRUCTURE OF FOURTH PDZ DOMAIN OF PDZ DOMAIN TITLE 2 CONTAINING PROTEIN 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PDZ DOMAIN-CONTAINING PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PDZ DOMAIN; COMPND 5 SYNONYM: CFTR-ASSOCIATED PROTEIN OF 70 KDA, NA/PI COMPND 6 COTRANSPORTER C-TERMINAL-ASSOCIATED PROTEIN, NAPI-CAP1, COMPND 7 NA(+)/H(+) EXCHANGER REGULATORY FACTOR 3, SODIUM-HYDROGEN COMPND 8 EXCHANGER REGULATORY FACTOR 3; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PDZK1; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P050905-18; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS PDZ DOMAIN, REGULATORY FACTOR, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, KEYWDS 4 RSGI, METAL BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.N.NIRAULA,T.TOMIZAWA,K.KOSHIBA,M.INOUE,T.KIGAWA, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 3 (RSGI) REVDAT 2 24-FEB-09 2EEJ 1 VERSN REVDAT 1 26-FEB-08 2EEJ 0 JRNL AUTH T.N.NIRAULA,T.TOMIZAWA,K.KOSHIBA,M.INOUE,T.KIGAWA, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF FOURTH PDZ DOMAIN OF PDZ JRNL TITL 2 DOMAIN CONTAINING PROTEIN 1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EEJ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-FEB-07. REMARK 100 THE RCSB ID CODE IS RCSB026566. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2.65MM PDZ DOMAIN U-13C,15N; REMARK 210 20MM D-TRIS-HCL(PH 7.0); 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; REMARK 210 10% D20, 90% H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, NMRPIPE REMARK 210 20031121, NMR VIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 8 -174.25 -69.82 REMARK 500 1 ASN A 18 36.40 39.57 REMARK 500 1 VAL A 58 109.08 -161.41 REMARK 500 1 ASN A 59 35.51 70.81 REMARK 500 1 PRO A 67 -172.76 -69.77 REMARK 500 1 LYS A 89 153.27 -47.46 REMARK 500 1 LYS A 90 -55.93 -132.51 REMARK 500 2 SER A 6 30.09 37.02 REMARK 500 2 PRO A 8 -165.23 -69.80 REMARK 500 2 ASN A 18 42.03 38.68 REMARK 500 2 TYR A 20 -176.28 -53.74 REMARK 500 2 VAL A 61 122.66 -174.18 REMARK 500 2 LYS A 89 79.93 -111.28 REMARK 500 3 PRO A 8 -173.81 -69.79 REMARK 500 3 ASN A 18 46.12 -87.02 REMARK 500 3 PRO A 31 -179.07 -69.80 REMARK 500 3 GLU A 52 -33.07 -131.68 REMARK 500 3 ASP A 53 155.59 -49.53 REMARK 500 4 ASN A 18 -70.43 -93.55 REMARK 500 4 TYR A 20 130.63 -37.14 REMARK 500 4 ILE A 56 -70.41 -82.59 REMARK 500 4 VAL A 61 128.23 -171.68 REMARK 500 4 PRO A 67 -169.55 -69.72 REMARK 500 5 SER A 3 42.42 34.52 REMARK 500 5 PRO A 8 -179.47 -69.82 REMARK 500 5 ASN A 18 96.67 -47.09 REMARK 500 5 ARG A 28 49.51 -85.06 REMARK 500 5 GLU A 52 -31.70 -130.28 REMARK 500 5 VAL A 61 125.94 -173.63 REMARK 500 5 GLU A 66 146.90 -39.53 REMARK 500 5 PRO A 67 -163.73 -69.78 REMARK 500 6 PRO A 8 -163.99 -69.83 REMARK 500 6 GLU A 17 -62.01 -123.25 REMARK 500 6 GLU A 37 38.05 72.35 REMARK 500 6 PRO A 67 -170.02 -69.70 REMARK 500 6 PRO A 93 91.02 -69.75 REMARK 500 7 PRO A 8 -179.09 -69.78 REMARK 500 7 ARG A 28 77.83 -109.48 REMARK 500 7 SER A 33 -179.35 -62.46 REMARK 500 7 GLU A 52 -31.56 -130.14 REMARK 500 7 ASN A 59 29.67 48.43 REMARK 500 7 SER A 78 -29.94 -36.62 REMARK 500 7 SER A 91 125.93 -37.04 REMARK 500 7 SER A 95 106.68 -51.87 REMARK 500 8 SER A 6 175.35 -50.71 REMARK 500 8 ARG A 28 113.09 -34.18 REMARK 500 8 PRO A 31 -179.01 -69.83 REMARK 500 8 ASN A 59 26.63 39.46 REMARK 500 8 GLU A 66 149.22 -37.86 REMARK 500 8 PRO A 67 -164.43 -69.77 REMARK 500 8 SER A 91 47.45 -82.99 REMARK 500 9 PRO A 8 -176.23 -69.70 REMARK 500 9 TYR A 20 117.24 -33.95 REMARK 500 9 ILE A 56 -70.06 -68.51 REMARK 500 9 GLU A 66 143.93 -36.47 REMARK 500 9 ASN A 81 133.64 -175.21 REMARK 500 10 SER A 6 44.44 -87.95 REMARK 500 10 PRO A 8 -174.59 -69.72 REMARK 500 10 GLU A 17 26.34 43.33 REMARK 500 10 TYR A 20 115.14 -34.24 REMARK 500 10 ARG A 28 116.05 -38.12 REMARK 500 10 ASN A 62 90.39 -65.94 REMARK 500 10 VAL A 63 38.71 -94.39 REMARK 500 11 PRO A 8 -175.14 -69.80 REMARK 500 11 ARG A 28 133.92 -35.21 REMARK 500 11 ILE A 56 -63.55 -91.30 REMARK 500 11 VAL A 61 140.73 -170.14 REMARK 500 12 PRO A 8 -175.31 -69.80 REMARK 500 12 ARG A 28 109.68 -34.40 REMARK 500 12 PRO A 31 -177.08 -69.74 REMARK 500 12 ASP A 51 35.99 -83.56 REMARK 500 12 GLU A 52 -33.54 -133.20 REMARK 500 12 VAL A 61 131.44 -170.94 REMARK 500 12 PRO A 93 1.73 -69.76 REMARK 500 13 SER A 2 86.75 -65.66 REMARK 500 13 ASN A 18 -63.06 -98.23 REMARK 500 13 ARG A 28 84.08 -65.00 REMARK 500 14 SER A 5 -56.56 -126.99 REMARK 500 14 LYS A 15 142.50 -34.20 REMARK 500 14 ASN A 59 25.18 39.25 REMARK 500 14 SER A 91 95.40 -55.43 REMARK 500 14 PRO A 93 0.83 -69.80 REMARK 500 15 SER A 2 63.03 -111.67 REMARK 500 15 PRO A 8 -168.46 -69.70 REMARK 500 15 ARG A 28 133.19 -34.29 REMARK 500 15 PRO A 31 -178.73 -69.80 REMARK 500 15 VAL A 61 132.21 -170.99 REMARK 500 15 PRO A 67 -169.74 -69.77 REMARK 500 16 ASN A 18 43.79 -93.69 REMARK 500 16 TYR A 20 170.49 -45.56 REMARK 500 16 ARG A 28 42.59 -91.92 REMARK 500 16 VAL A 61 121.01 -174.65 REMARK 500 16 PRO A 67 -173.19 -69.70 REMARK 500 16 LYS A 89 171.74 -57.42 REMARK 500 16 PRO A 93 93.98 -69.70 REMARK 500 17 SER A 5 106.27 -47.79 REMARK 500 17 LYS A 40 151.90 -45.75 REMARK 500 17 ILE A 55 94.90 -66.10 REMARK 500 17 PRO A 67 -163.58 -69.76 REMARK 500 18 PRO A 31 -172.36 -69.75 REMARK 500 18 ILE A 56 -71.17 -67.84 REMARK 500 18 GLU A 66 150.49 -42.21 REMARK 500 18 PRO A 67 -168.41 -69.75 REMARK 500 18 LYS A 89 142.44 -174.57 REMARK 500 19 SER A 2 165.00 -46.46 REMARK 500 19 SER A 3 100.84 -47.39 REMARK 500 19 ASN A 18 43.78 -103.61 REMARK 500 19 ILE A 55 90.68 -67.63 REMARK 500 19 GLU A 66 151.33 -42.66 REMARK 500 19 PRO A 67 -163.74 -69.74 REMARK 500 19 SER A 94 87.49 -50.04 REMARK 500 19 SER A 95 146.60 -38.62 REMARK 500 20 PRO A 8 -168.45 -69.75 REMARK 500 20 ASN A 18 -70.14 -76.11 REMARK 500 20 SER A 33 -177.06 -68.84 REMARK 500 20 ALA A 44 -72.09 -60.72 REMARK 500 20 ILE A 56 -70.98 -73.25 REMARK 500 20 LYS A 89 45.35 -104.80 REMARK 500 20 LYS A 90 39.65 -84.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2EEI RELATED DB: PDB REMARK 900 DIFFERENT DOMAIN OF THE SAME PROTEIN REMARK 900 RELATED ID: HSS001001614.3 RELATED DB: TARGETDB DBREF 2EEJ A 8 90 UNP Q5T2W1 PDZD1_HUMAN 376 458 SEQADV 2EEJ GLY A 1 UNP Q5T2W1 EXPRESSION TAG SEQADV 2EEJ SER A 2 UNP Q5T2W1 EXPRESSION TAG SEQADV 2EEJ SER A 3 UNP Q5T2W1 EXPRESSION TAG SEQADV 2EEJ GLY A 4 UNP Q5T2W1 EXPRESSION TAG SEQADV 2EEJ SER A 5 UNP Q5T2W1 EXPRESSION TAG SEQADV 2EEJ SER A 6 UNP Q5T2W1 EXPRESSION TAG SEQADV 2EEJ GLY A 7 UNP Q5T2W1 EXPRESSION TAG SEQADV 2EEJ SER A 91 UNP Q5T2W1 EXPRESSION TAG SEQADV 2EEJ GLY A 92 UNP Q5T2W1 EXPRESSION TAG SEQADV 2EEJ PRO A 93 UNP Q5T2W1 EXPRESSION TAG SEQADV 2EEJ SER A 94 UNP Q5T2W1 EXPRESSION TAG SEQADV 2EEJ SER A 95 UNP Q5T2W1 EXPRESSION TAG SEQADV 2EEJ GLY A 96 UNP Q5T2W1 EXPRESSION TAG SEQRES 1 A 96 GLY SER SER GLY SER SER GLY PRO LYS LEU CYS ARG LEU SEQRES 2 A 96 ALA LYS GLY GLU ASN GLY TYR GLY PHE HIS LEU ASN ALA SEQRES 3 A 96 ILE ARG GLY LEU PRO GLY SER PHE ILE LYS GLU VAL GLN SEQRES 4 A 96 LYS GLY GLY PRO ALA ASP LEU ALA GLY LEU GLU ASP GLU SEQRES 5 A 96 ASP VAL ILE ILE GLU VAL ASN GLY VAL ASN VAL LEU ASP SEQRES 6 A 96 GLU PRO TYR GLU LYS VAL VAL ASP ARG ILE GLN SER SER SEQRES 7 A 96 GLY LYS ASN VAL THR LEU LEU VAL CYS GLY LYS LYS SER SEQRES 8 A 96 GLY PRO SER SER GLY HELIX 1 1 GLY A 42 GLY A 48 1 7 HELIX 2 2 PRO A 67 GLY A 79 1 13 SHEET 1 A 3 LYS A 9 ALA A 14 0 SHEET 2 A 3 ASN A 81 VAL A 86 -1 O VAL A 82 N LEU A 13 SHEET 3 A 3 GLU A 57 VAL A 58 -1 N GLU A 57 O LEU A 85 SHEET 1 B 3 HIS A 23 LEU A 24 0 SHEET 2 B 3 SER A 33 LYS A 36 -1 O LYS A 36 N HIS A 23 SHEET 3 B 3 VAL A 54 ILE A 55 -1 O ILE A 55 N SER A 33 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 194 0 0 2 6 0 0 6 0 0 0 8 END