HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 25-APR-06 2DNA TITLE SOLUTION STRUCTURE OF RSGI RUH-056, A UBA DOMAIN FROM MOUSE TITLE 2 CDNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNNAMED PROTEIN PRODUCT; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL OF DSK2 PROTEIN, RESIDUES 8-61; COMPND 5 SYNONYM: UBA DOMAIN, UBIQUITIN-ASSOCIATED DOMAIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: CELL FREE SYNTHESIS; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P050425-16; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS UBIQUITIN ASSOCIATED DOMAIN, DSK2 PROTEIN, PROTEASOME, KEYWDS 2 STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 3 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 4 GENOMICS/PROTEOMICS INITIATIVE, RSGI, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.Z.M.RUHUL MOMEN,H.HIROTA,F.HAYASHI,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 2 24-FEB-09 2DNA 1 VERSN REVDAT 1 25-OCT-06 2DNA 0 JRNL AUTH A.Z.M.RUHUL MOMEN,H.HIROTA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RSGI RUH-056, A UBA DOMAIN JRNL TITL 2 FROM MOUSE CDNA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 1.0.7 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DNA COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-APR-06. REMARK 100 THE RCSB ID CODE IS RCSB025616. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.03MM DOMAIN U-15N, 13C; REMARK 210 20MM D-TRIS-HCL(PH 7.0); 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; REMARK 210 10% D2O, 90% H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, NMRPIPE 20031121, REMARK 210 NMRVIEW 5.04, KUJIRA 0.955, REMARK 210 CYANA 1.0.7 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 5 109.63 62.17 REMARK 500 1 SER A 6 118.12 -164.30 REMARK 500 1 SER A 11 131.63 -178.68 REMARK 500 1 LEU A 12 85.85 65.80 REMARK 500 1 PHE A 31 75.55 -69.34 REMARK 500 1 ASN A 33 96.90 -44.35 REMARK 500 1 PHE A 61 98.70 51.56 REMARK 500 1 SER A 62 -58.14 -148.53 REMARK 500 2 SER A 2 98.38 -174.62 REMARK 500 2 LEU A 12 83.16 -154.88 REMARK 500 2 PHE A 19 41.53 -96.68 REMARK 500 2 PHE A 31 79.19 -68.78 REMARK 500 2 ASN A 33 92.96 -58.38 REMARK 500 2 PHE A 61 97.52 -68.35 REMARK 500 3 SER A 3 81.43 40.24 REMARK 500 3 SER A 9 121.21 63.54 REMARK 500 3 SER A 11 88.27 64.16 REMARK 500 3 LEU A 12 100.95 -173.11 REMARK 500 3 ALA A 14 154.56 -48.83 REMARK 500 3 PHE A 19 34.89 -96.81 REMARK 500 3 ASN A 33 95.38 -47.16 REMARK 500 3 PHE A 61 97.22 47.58 REMARK 500 3 SER A 65 -60.17 -104.89 REMARK 500 4 SER A 5 151.90 179.59 REMARK 500 4 HIS A 10 -59.86 -154.90 REMARK 500 4 ALA A 14 154.18 -47.18 REMARK 500 4 PHE A 19 30.72 -90.72 REMARK 500 4 PHE A 31 75.86 -68.33 REMARK 500 4 ASN A 33 84.67 -60.06 REMARK 500 4 ASP A 47 83.20 -160.27 REMARK 500 4 SER A 66 102.33 -50.00 REMARK 500 5 SER A 2 85.16 60.40 REMARK 500 5 SER A 3 -58.35 -142.09 REMARK 500 5 SER A 5 -57.89 74.58 REMARK 500 5 HIS A 10 95.33 64.62 REMARK 500 5 LEU A 12 -107.32 -80.04 REMARK 500 5 GLN A 13 158.75 66.06 REMARK 500 5 PHE A 31 71.44 -68.19 REMARK 500 5 ASN A 33 96.93 -43.93 REMARK 500 5 ASP A 47 85.01 -171.44 REMARK 500 5 SER A 66 161.34 -44.27 REMARK 500 6 SER A 9 -57.20 -134.88 REMARK 500 6 HIS A 10 -60.97 -98.90 REMARK 500 6 LEU A 12 175.00 56.65 REMARK 500 6 ALA A 14 154.82 -44.31 REMARK 500 6 PHE A 19 45.33 -105.08 REMARK 500 6 MET A 23 -36.24 -38.29 REMARK 500 6 PHE A 31 75.17 -68.83 REMARK 500 6 ASN A 33 97.94 -40.78 REMARK 500 6 ASP A 47 85.75 -157.15 REMARK 500 6 PHE A 61 106.06 -55.55 REMARK 500 6 SER A 65 81.36 46.31 REMARK 500 6 SER A 66 -57.94 -139.07 REMARK 500 7 SER A 2 83.29 55.24 REMARK 500 7 HIS A 10 80.65 44.11 REMARK 500 7 SER A 11 89.23 39.91 REMARK 500 7 LEU A 12 -107.10 59.85 REMARK 500 7 ASN A 33 96.10 -45.94 REMARK 500 7 ASP A 47 90.30 -170.60 REMARK 500 8 SER A 9 159.68 178.50 REMARK 500 8 HIS A 10 88.45 -151.53 REMARK 500 8 ALA A 14 153.85 -49.39 REMARK 500 8 PHE A 31 73.70 -67.46 REMARK 500 8 ASN A 33 97.82 -40.98 REMARK 500 8 GLN A 39 -35.36 -38.93 REMARK 500 8 SER A 58 109.09 -59.32 REMARK 500 8 PHE A 61 109.02 -44.52 REMARK 500 9 SER A 5 111.32 -169.59 REMARK 500 9 SER A 6 -56.70 -169.70 REMARK 500 9 SER A 9 148.75 -39.61 REMARK 500 9 HIS A 10 73.08 -173.40 REMARK 500 9 SER A 11 153.44 64.92 REMARK 500 9 LEU A 12 91.79 59.32 REMARK 500 9 PHE A 31 73.80 -65.69 REMARK 500 9 ASN A 33 89.69 -56.55 REMARK 500 9 PHE A 61 100.68 56.65 REMARK 500 9 SER A 65 -64.58 69.36 REMARK 500 9 SER A 66 97.30 -167.28 REMARK 500 10 SER A 2 93.52 45.42 REMARK 500 10 SER A 3 -58.51 -175.72 REMARK 500 10 HIS A 10 125.53 -172.26 REMARK 500 10 ALA A 14 154.26 -47.55 REMARK 500 10 PHE A 31 72.90 -68.96 REMARK 500 10 ASN A 33 97.63 -42.01 REMARK 500 10 ASP A 45 74.89 46.91 REMARK 500 10 GLN A 59 -58.91 -175.76 REMARK 500 10 SER A 65 97.71 63.16 REMARK 500 11 SER A 3 97.68 58.91 REMARK 500 11 SER A 11 87.13 43.68 REMARK 500 11 ALA A 14 154.05 -45.41 REMARK 500 11 PHE A 31 73.38 -66.26 REMARK 500 11 ASN A 33 89.65 -55.59 REMARK 500 11 SER A 65 88.30 52.43 REMARK 500 12 HIS A 10 89.91 69.70 REMARK 500 12 SER A 11 -57.89 176.29 REMARK 500 12 LEU A 12 76.55 42.72 REMARK 500 12 ALA A 14 152.59 -47.16 REMARK 500 12 PHE A 19 41.18 -107.20 REMARK 500 12 PHE A 31 73.26 -68.16 REMARK 500 12 ASN A 33 97.02 -43.84 REMARK 500 12 GLN A 59 92.23 56.48 REMARK 500 12 PHE A 61 95.92 51.86 REMARK 500 12 SER A 62 101.15 57.70 REMARK 500 13 SER A 2 98.29 61.07 REMARK 500 13 GLN A 13 162.42 56.70 REMARK 500 13 ALA A 14 154.72 -47.36 REMARK 500 13 PHE A 31 74.62 -69.51 REMARK 500 13 ASN A 33 90.78 -54.64 REMARK 500 13 ASP A 47 82.93 -159.46 REMARK 500 13 GLN A 59 -59.17 -160.17 REMARK 500 13 SER A 66 140.47 65.89 REMARK 500 14 SER A 3 127.29 63.26 REMARK 500 14 SER A 9 96.63 -176.33 REMARK 500 14 HIS A 10 77.21 -106.68 REMARK 500 14 SER A 11 82.26 -171.98 REMARK 500 14 LEU A 12 89.79 49.95 REMARK 500 14 PHE A 19 48.99 -109.48 REMARK 500 14 PHE A 31 76.31 -69.18 REMARK 500 14 ASN A 33 84.04 -60.58 REMARK 500 14 ASP A 45 29.44 41.49 REMARK 500 14 ASP A 47 85.67 -161.13 REMARK 500 14 SER A 58 104.47 -56.14 REMARK 500 14 GLN A 59 84.69 -168.03 REMARK 500 14 SER A 65 94.46 -161.43 REMARK 500 14 SER A 66 -58.17 78.87 REMARK 500 15 SER A 2 121.87 -174.94 REMARK 500 15 SER A 3 -58.61 -173.16 REMARK 500 15 ALA A 14 155.13 -47.72 REMARK 500 15 PHE A 31 75.97 -68.92 REMARK 500 15 ASN A 33 95.13 -48.36 REMARK 500 15 PHE A 61 100.74 52.58 REMARK 500 15 SER A 66 -71.23 67.34 REMARK 500 16 SER A 2 101.61 -165.36 REMARK 500 16 HIS A 10 91.37 50.85 REMARK 500 16 LEU A 12 79.14 -118.26 REMARK 500 16 ALA A 14 153.07 -46.64 REMARK 500 16 PHE A 19 54.08 -111.84 REMARK 500 16 PHE A 31 78.67 -69.02 REMARK 500 16 ASN A 33 93.02 -50.90 REMARK 500 16 PHE A 61 94.53 46.89 REMARK 500 16 SER A 62 148.38 65.31 REMARK 500 17 SER A 3 82.71 -179.48 REMARK 500 17 SER A 5 80.02 178.03 REMARK 500 17 SER A 6 90.27 -63.70 REMARK 500 17 SER A 9 86.10 -152.00 REMARK 500 17 LEU A 12 103.47 62.98 REMARK 500 17 ALA A 14 154.70 -41.42 REMARK 500 17 PRO A 15 -74.12 -74.89 REMARK 500 17 PHE A 19 57.63 -97.81 REMARK 500 17 PHE A 31 75.29 -67.16 REMARK 500 17 ASN A 33 91.31 -53.37 REMARK 500 17 GLN A 59 128.84 -174.46 REMARK 500 17 SER A 62 167.79 55.73 REMARK 500 18 SER A 2 -58.06 -168.74 REMARK 500 18 SER A 5 162.90 58.52 REMARK 500 18 PHE A 19 57.64 -97.46 REMARK 500 18 PHE A 31 74.43 -69.50 REMARK 500 18 ASN A 33 97.61 -40.98 REMARK 500 18 ASP A 47 111.74 -165.83 REMARK 500 18 PHE A 61 169.22 54.94 REMARK 500 18 SER A 65 95.64 -178.18 REMARK 500 19 SER A 3 100.53 53.72 REMARK 500 19 SER A 5 -58.48 -151.68 REMARK 500 19 SER A 11 159.56 60.99 REMARK 500 19 GLN A 13 173.57 -59.15 REMARK 500 19 ALA A 14 154.45 59.41 REMARK 500 19 PRO A 15 -74.17 -75.03 REMARK 500 19 PHE A 31 78.72 -65.52 REMARK 500 19 ASN A 33 91.87 -57.67 REMARK 500 19 ASP A 47 87.25 -174.27 REMARK 500 19 PHE A 61 97.63 47.36 REMARK 500 19 SER A 65 98.60 58.19 REMARK 500 20 SER A 5 156.04 61.58 REMARK 500 20 SER A 11 -54.18 -178.56 REMARK 500 20 GLN A 13 139.78 64.44 REMARK 500 20 ALA A 14 159.02 57.99 REMARK 500 20 PRO A 15 -71.01 -74.90 REMARK 500 20 PHE A 31 74.48 -69.93 REMARK 500 20 ASN A 33 97.52 -41.97 REMARK 500 20 SER A 62 117.32 63.20 REMARK 500 20 SER A 65 111.74 -174.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMT008001321.1 RELATED DB: TARGETDB DBREF 2DNA A 8 61 UNP Q14DR8 Q14DR8_MOUSE 556 609 SEQADV 2DNA GLY A 1 UNP Q14DR8 CLONING ARTIFACT SEQADV 2DNA SER A 2 UNP Q14DR8 CLONING ARTIFACT SEQADV 2DNA SER A 3 UNP Q14DR8 CLONING ARTIFACT SEQADV 2DNA GLY A 4 UNP Q14DR8 CLONING ARTIFACT SEQADV 2DNA SER A 5 UNP Q14DR8 CLONING ARTIFACT SEQADV 2DNA SER A 6 UNP Q14DR8 CLONING ARTIFACT SEQADV 2DNA GLY A 7 UNP Q14DR8 CLONING ARTIFACT SEQADV 2DNA SER A 62 UNP Q14DR8 CLONING ARTIFACT SEQADV 2DNA GLY A 63 UNP Q14DR8 CLONING ARTIFACT SEQADV 2DNA PRO A 64 UNP Q14DR8 CLONING ARTIFACT SEQADV 2DNA SER A 65 UNP Q14DR8 CLONING ARTIFACT SEQADV 2DNA SER A 66 UNP Q14DR8 CLONING ARTIFACT SEQADV 2DNA GLY A 67 UNP Q14DR8 CLONING ARTIFACT SEQRES 1 A 67 GLY SER SER GLY SER SER GLY PRO SER HIS SER LEU GLN SEQRES 2 A 67 ALA PRO GLU VAL ARG PHE SER LYS GLU MET GLU CYS LEU SEQRES 3 A 67 GLN ALA MET GLY PHE VAL ASN TYR ASN ALA ASN LEU GLN SEQRES 4 A 67 ALA LEU ILE ALA THR ASP GLY ASP THR ASN ALA ALA ILE SEQRES 5 A 67 TYR LYS LEU LYS SER SER GLN GLY PHE SER GLY PRO SER SEQRES 6 A 67 SER GLY HELIX 1 1 ALA A 14 PHE A 19 1 6 HELIX 2 2 PHE A 19 GLY A 30 1 12 HELIX 3 3 ASN A 33 THR A 44 1 12 HELIX 4 4 ASP A 47 SER A 58 1 12 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 255 0 0 4 0 0 0 6 0 0 0 6 END