HEADER HYDROLASE 18-APR-06 2DLE TITLE SOLUTION STRUCTURE OF THE FOURTH FN3 DOMAIN OF HUMAN TITLE 2 RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE ETA COMPND MOL_ID: 1; COMPND 2 MOLECULE: RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE ETA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FN3; COMPND 5 SYNONYM: PROTEIN-TYROSINE PHOSPHATASE ETA, R-PTP-ETA, HPTP COMPND 6 ETA, PROTEIN-TYROSINE PHOSPHATASE RECEPTOR TYPE J, DENSITY- COMPND 7 ENHANCED PHOSPHATASE 1, DEP-1, CD148 ANTIGEN; COMPND 8 EC: 3.1.3.48; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PTPRJ, DEP1; SOURCE 6 EXPRESSION_SYSTEM: CELL FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P050302-39; SOURCE 9 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS PROTEIN-TYROSINE PHOSPHATASE ETA, R-PTP-ETA, HPTP ETA, KEYWDS 2 PROTEIN-TYROSINE PHOSPHATASE RECEPTOR TYPE J, DENSITY- KEYWDS 3 ENHANCED PHOSPHATASE 1, CD148 ANTIGEN, STRUCTURAL GENOMICS, KEYWDS 4 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND KEYWDS 5 FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 6 INITIATIVE, RSGI, HYDROLASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.IZUMI,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 2 24-FEB-09 2DLE 1 VERSN REVDAT 1 18-OCT-06 2DLE 0 JRNL AUTH K.IZUMI,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE FOURTH FN3 DOMAIN OF JRNL TITL 2 HUMAN RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE JRNL TITL 3 ETA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT,P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DLE COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-APR-06. REMARK 100 THE RCSB ID CODE IS RCSB025552. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.05MM 13C, 15N-LABELED REMARK 210 PROTEIN; 20MM D-TRIS-HCL; REMARK 210 100MM NACL; 1MM DTT; 0.02% REMARK 210 NAN3; 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, NMRPIPE 20031121, REMARK 210 NMRVIEW 5.0.4, KUJIRA 0.932, REMARK 210 CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION,STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 13 33.15 71.40 REMARK 500 1 SER A 31 42.29 -84.42 REMARK 500 1 ASP A 32 108.27 -167.28 REMARK 500 1 SER A 36 48.74 -75.72 REMARK 500 1 PRO A 59 4.02 -69.76 REMARK 500 1 ALA A 61 114.58 -162.77 REMARK 500 1 PRO A 98 2.17 -69.71 REMARK 500 2 SER A 31 31.57 -87.13 REMARK 500 2 SER A 36 45.15 -81.88 REMARK 500 2 SER A 37 -66.25 -99.56 REMARK 500 2 ASN A 38 38.09 -84.95 REMARK 500 2 PRO A 59 3.83 -69.71 REMARK 500 2 PRO A 101 -177.55 -69.79 REMARK 500 3 SER A 23 144.91 -173.44 REMARK 500 3 SER A 31 44.83 -97.07 REMARK 500 3 ASP A 32 119.59 -172.29 REMARK 500 3 ASN A 38 40.63 -81.77 REMARK 500 3 PRO A 59 3.67 -69.81 REMARK 500 3 SER A 102 105.44 -43.00 REMARK 500 3 SER A 103 108.27 -35.89 REMARK 500 4 SER A 5 -53.00 -120.38 REMARK 500 4 SER A 31 91.07 -50.99 REMARK 500 4 ASP A 32 140.91 -34.15 REMARK 500 4 SER A 36 98.19 -45.10 REMARK 500 4 SER A 37 -71.22 -132.34 REMARK 500 4 GLU A 48 -73.35 -74.28 REMARK 500 4 PRO A 59 4.05 -69.72 REMARK 500 4 PRO A 64 -179.50 -69.77 REMARK 500 4 VAL A 97 133.59 -33.76 REMARK 500 4 PRO A 98 5.63 -69.73 REMARK 500 4 PRO A 101 -173.53 -69.74 REMARK 500 5 SER A 3 155.33 -44.84 REMARK 500 5 ILE A 9 125.58 -37.82 REMARK 500 5 SER A 23 141.08 -174.63 REMARK 500 5 ASP A 32 94.47 -36.94 REMARK 500 5 GLU A 34 -28.55 -37.36 REMARK 500 5 PRO A 59 3.88 -69.76 REMARK 500 5 PRO A 64 -179.12 -69.80 REMARK 500 5 VAL A 97 135.71 -34.19 REMARK 500 5 PRO A 98 3.31 -69.78 REMARK 500 5 SER A 102 94.26 -55.36 REMARK 500 6 SER A 31 42.76 -81.98 REMARK 500 6 ASP A 32 113.06 -174.44 REMARK 500 6 SER A 36 39.10 -97.69 REMARK 500 6 SER A 37 -70.02 -77.87 REMARK 500 6 PRO A 59 3.78 -69.71 REMARK 500 6 LEU A 80 48.51 -92.70 REMARK 500 6 PRO A 98 92.86 -69.72 REMARK 500 6 SER A 102 100.85 -56.92 REMARK 500 7 SER A 5 39.95 -85.29 REMARK 500 7 SER A 23 139.32 -175.16 REMARK 500 7 SER A 31 88.94 -57.67 REMARK 500 7 ASP A 32 51.04 34.22 REMARK 500 7 ASN A 33 96.78 -47.14 REMARK 500 7 SER A 35 43.17 -97.91 REMARK 500 7 SER A 36 48.83 -79.25 REMARK 500 7 GLU A 48 -53.30 -124.71 REMARK 500 7 PRO A 59 3.88 -69.76 REMARK 500 7 ALA A 61 118.77 -165.01 REMARK 500 7 VAL A 97 138.93 -36.87 REMARK 500 7 SER A 102 115.58 -38.40 REMARK 500 8 SER A 5 121.24 -171.92 REMARK 500 8 SER A 23 149.94 -175.11 REMARK 500 8 SER A 31 88.21 -49.30 REMARK 500 8 ASP A 32 49.45 34.32 REMARK 500 8 ASN A 33 93.09 -48.65 REMARK 500 8 SER A 35 43.18 -90.18 REMARK 500 8 SER A 36 47.47 -77.10 REMARK 500 8 PRO A 59 5.19 -69.82 REMARK 500 8 PRO A 64 -179.15 -69.77 REMARK 500 8 LEU A 80 51.20 -94.62 REMARK 500 8 LEU A 90 118.38 -162.25 REMARK 500 8 PRO A 98 2.63 -69.80 REMARK 500 9 SER A 3 46.46 -84.37 REMARK 500 9 SER A 23 131.91 -173.19 REMARK 500 9 SER A 31 47.37 -97.67 REMARK 500 9 SER A 36 41.29 -84.42 REMARK 500 9 SER A 37 -68.73 -96.42 REMARK 500 9 ASN A 38 44.95 -81.89 REMARK 500 9 PRO A 59 4.21 -69.77 REMARK 500 9 ALA A 61 118.92 -166.46 REMARK 500 9 PRO A 64 -179.39 -69.76 REMARK 500 9 SER A 102 97.46 -40.51 REMARK 500 10 SER A 5 41.74 -100.38 REMARK 500 10 SER A 23 149.49 -174.18 REMARK 500 10 ASP A 32 47.33 35.53 REMARK 500 10 ASN A 33 99.85 -34.50 REMARK 500 10 SER A 36 74.52 -63.57 REMARK 500 10 ASP A 50 145.26 -174.58 REMARK 500 10 PRO A 59 3.80 -69.82 REMARK 500 10 LEU A 80 49.94 -86.21 REMARK 500 10 PRO A 98 2.82 -69.74 REMARK 500 11 ALA A 8 144.74 -39.03 REMARK 500 11 ILE A 9 121.01 -36.12 REMARK 500 11 SER A 31 45.39 -81.93 REMARK 500 11 ASP A 32 115.20 -173.43 REMARK 500 11 SER A 36 51.57 -103.37 REMARK 500 11 SER A 37 -69.83 -93.47 REMARK 500 11 ASN A 38 38.64 -84.71 REMARK 500 11 ASP A 50 137.07 -170.45 REMARK 500 11 PRO A 59 4.02 -69.78 REMARK 500 11 ALA A 61 116.57 -165.73 REMARK 500 11 PRO A 64 -179.07 -69.80 REMARK 500 11 LEU A 80 49.85 -94.90 REMARK 500 12 ASP A 13 30.19 71.11 REMARK 500 12 SER A 23 138.14 -175.11 REMARK 500 12 SER A 31 34.08 -88.58 REMARK 500 12 ASN A 38 39.10 -82.26 REMARK 500 12 ASP A 50 -176.71 -171.92 REMARK 500 12 PRO A 59 3.86 -69.70 REMARK 500 12 PRO A 64 -172.70 -69.79 REMARK 500 13 ASP A 13 30.43 75.01 REMARK 500 13 SER A 23 149.20 -175.05 REMARK 500 13 SER A 31 39.08 -82.08 REMARK 500 13 ASP A 32 46.85 33.62 REMARK 500 13 GLU A 34 -38.57 -34.30 REMARK 500 13 SER A 36 40.26 -105.16 REMARK 500 13 PRO A 59 4.39 -69.76 REMARK 500 14 SER A 23 149.38 -175.22 REMARK 500 14 SER A 35 37.89 74.54 REMARK 500 14 SER A 36 41.35 -82.23 REMARK 500 14 PRO A 59 4.18 -69.77 REMARK 500 14 LEU A 80 44.95 -93.17 REMARK 500 14 PRO A 101 88.67 -69.73 REMARK 500 14 SER A 102 136.16 -38.87 REMARK 500 15 ASP A 32 93.97 -35.23 REMARK 500 15 GLU A 34 -39.42 -35.07 REMARK 500 15 PRO A 59 4.14 -69.76 REMARK 500 15 LEU A 80 47.85 -86.61 REMARK 500 15 PRO A 98 3.38 -69.81 REMARK 500 16 SER A 5 100.82 -47.83 REMARK 500 16 ILE A 9 102.66 -54.80 REMARK 500 16 SER A 23 144.37 -174.57 REMARK 500 16 SER A 31 46.16 -91.07 REMARK 500 16 ASN A 33 -35.72 -132.34 REMARK 500 16 SER A 36 44.00 -80.61 REMARK 500 16 SER A 37 -64.63 -103.47 REMARK 500 16 ASN A 38 38.38 -82.70 REMARK 500 16 PRO A 59 4.51 -69.81 REMARK 500 16 SER A 102 142.94 -172.71 REMARK 500 17 SER A 31 87.88 -49.37 REMARK 500 17 ASN A 33 44.13 35.18 REMARK 500 17 SER A 35 51.04 36.89 REMARK 500 17 THR A 49 38.77 35.49 REMARK 500 17 PRO A 59 4.55 -69.80 REMARK 500 17 PRO A 64 -177.00 -69.75 REMARK 500 17 LEU A 80 39.06 -98.66 REMARK 500 17 VAL A 97 124.37 -35.66 REMARK 500 17 PRO A 101 2.90 -69.76 REMARK 500 17 SER A 102 161.83 -40.60 REMARK 500 18 ALA A 8 158.42 -38.44 REMARK 500 18 ASP A 32 95.75 -34.97 REMARK 500 18 GLU A 34 -35.47 -39.45 REMARK 500 18 THR A 49 -38.63 -131.16 REMARK 500 18 SER A 57 32.00 -95.09 REMARK 500 18 PRO A 59 4.38 -69.81 REMARK 500 18 LEU A 80 46.81 -102.57 REMARK 500 18 PRO A 98 4.08 -69.69 REMARK 500 18 SER A 102 89.49 -66.79 REMARK 500 19 SER A 5 -61.16 -122.51 REMARK 500 19 SER A 23 149.73 -173.62 REMARK 500 19 SER A 31 43.80 -108.78 REMARK 500 19 ASP A 32 112.83 -175.29 REMARK 500 19 SER A 36 48.16 -77.58 REMARK 500 19 PRO A 59 4.16 -69.76 REMARK 500 19 PRO A 101 -179.84 -69.75 REMARK 500 20 ASP A 13 33.15 72.34 REMARK 500 20 SER A 36 46.88 -79.09 REMARK 500 20 GLU A 48 -34.83 -38.01 REMARK 500 20 PRO A 59 4.45 -69.73 REMARK 500 20 PRO A 64 -179.67 -69.79 REMARK 500 20 PRO A 98 7.60 -69.76 REMARK 500 20 PRO A 101 -178.43 -69.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSO002002643.1 RELATED DB: TARGETDB DBREF 2DLE A 8 98 UNP Q12913 PTPRJ_HUMAN 366 456 SEQADV 2DLE GLY A 1 UNP Q12913 CLONING ARTIFACT SEQADV 2DLE SER A 2 UNP Q12913 CLONING ARTIFACT SEQADV 2DLE SER A 3 UNP Q12913 CLONING ARTIFACT SEQADV 2DLE GLY A 4 UNP Q12913 CLONING ARTIFACT SEQADV 2DLE SER A 5 UNP Q12913 CLONING ARTIFACT SEQADV 2DLE SER A 6 UNP Q12913 CLONING ARTIFACT SEQADV 2DLE GLY A 7 UNP Q12913 CLONING ARTIFACT SEQADV 2DLE SER A 99 UNP Q12913 CLONING ARTIFACT SEQADV 2DLE GLY A 100 UNP Q12913 CLONING ARTIFACT SEQADV 2DLE PRO A 101 UNP Q12913 CLONING ARTIFACT SEQADV 2DLE SER A 102 UNP Q12913 CLONING ARTIFACT SEQADV 2DLE SER A 103 UNP Q12913 CLONING ARTIFACT SEQADV 2DLE GLY A 104 UNP Q12913 CLONING ARTIFACT SEQRES 1 A 104 GLY SER SER GLY SER SER GLY ALA ILE GLN VAL PHE ASP SEQRES 2 A 104 VAL THR ALA VAL ASN ILE SER ALA THR SER LEU THR LEU SEQRES 3 A 104 ILE TRP LYS VAL SER ASP ASN GLU SER SER SER ASN TYR SEQRES 4 A 104 THR TYR LYS ILE HIS VAL ALA GLY GLU THR ASP SER SER SEQRES 5 A 104 ASN LEU ASN VAL SER GLU PRO ARG ALA VAL ILE PRO GLY SEQRES 6 A 104 LEU ARG SER SER THR PHE TYR ASN ILE THR VAL CYS PRO SEQRES 7 A 104 VAL LEU GLY ASP ILE GLU GLY THR PRO GLY PHE LEU GLN SEQRES 8 A 104 VAL HIS THR PRO PRO VAL PRO SER GLY PRO SER SER GLY SHEET 1 A 3 VAL A 11 ILE A 19 0 SHEET 2 A 3 LEU A 24 VAL A 30 -1 O LYS A 29 N PHE A 12 SHEET 3 A 3 ARG A 60 VAL A 62 -1 O ALA A 61 N LEU A 26 SHEET 1 B 4 SER A 51 VAL A 56 0 SHEET 2 B 4 THR A 40 ALA A 46 -1 N ILE A 43 O LEU A 54 SHEET 3 B 4 PHE A 71 VAL A 79 -1 O VAL A 79 N THR A 40 SHEET 4 B 4 GLY A 88 HIS A 93 -1 O GLY A 88 N VAL A 76 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 247 0 0 0 7 0 0 6 0 0 0 8 END