HEADER ISOMERASE 30-MAR-06 2DIO TITLE CRYSTAL STRUCTURE OF THE ALLENE OXIDE CYCLASE 2 WITH BOUND INHIBITOR TITLE 2 VERNOLIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALLENE OXIDE CYCLASE 2; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: ALLENE OXIDE CYCLASE 2; COMPND 5 EC: 5.3.99.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: AT3G25770; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: M15; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE-30 KEYWDS BETA BARREL, INHIBITOR COMPLEX, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR E.HOFMANN,F.SCHALLER,P.ZERBE REVDAT 4 13-JUL-11 2DIO 1 VERSN REVDAT 3 24-FEB-09 2DIO 1 VERSN REVDAT 2 26-DEC-06 2DIO 1 JRNL REVDAT 1 21-NOV-06 2DIO 0 JRNL AUTH E.HOFMANN,P.ZERBE,F.SCHALLER JRNL TITL THE CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA ALLENE OXIDE JRNL TITL 2 CYCLASE: INSIGHTS INTO THE OXYLIPIN CYCLIZATION REACTION JRNL REF PLANT CELL V. 18 3201 2006 JRNL REFN ISSN 1040-4651 JRNL PMID 17085685 JRNL DOI 10.1105/TPC.106.043984 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.5 REMARK 3 NUMBER OF REFLECTIONS : 70876 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3583 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4688 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.32 REMARK 3 BIN R VALUE (WORKING SET) : 0.2970 REMARK 3 BIN FREE R VALUE SET COUNT : 245 REMARK 3 BIN FREE R VALUE : 0.3690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4092 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 51 REMARK 3 SOLVENT ATOMS : 368 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : -0.34000 REMARK 3 B33 (A**2) : 0.32000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.106 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.107 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.336 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4289 ; 0.021 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5819 ; 1.784 ; 2.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 531 ; 6.933 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 180 ;32.871 ;24.833 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 701 ;14.275 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ; 9.037 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 635 ; 0.234 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3249 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1982 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2916 ; 0.310 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 324 ; 0.144 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 48 ; 0.168 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 18 ; 0.144 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2690 ; 1.125 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4227 ; 1.693 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1826 ; 2.939 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1583 ; 4.134 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DIO COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-APR-06. REMARK 100 THE RCSB ID CODE IS RCSB025457. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-DEC-04; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N; NULL REMARK 200 RADIATION SOURCE : ROTATING ANODE; NULL REMARK 200 BEAMLINE : NULL; NULL REMARK 200 X-RAY GENERATOR MODEL : CU K-ALPHA; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54; NULL REMARK 200 MONOCHROMATOR : MONTEL MIRROR; NULL REMARK 200 OPTICS : MIRRORS; NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE; NULL REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70876 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 38.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.5 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07900 REMARK 200 FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.34500 REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 2BRJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG3350, 200MM NACL, 100MM REMARK 280 PHOSPHATE CITRATE, PH 4.2, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.25000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.95000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.90000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.95000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.25000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.90000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS A TRIMER CHAINS A,B,C REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 GLY A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 ARG A 11 REMARK 465 SER A 12 REMARK 465 PRO A 13 REMARK 465 SER A 14 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 GLY B 3 REMARK 465 SER B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 ARG B 11 REMARK 465 SER B 12 REMARK 465 PRO B 13 REMARK 465 SER B 14 REMARK 465 MET C 1 REMARK 465 ARG C 2 REMARK 465 GLY C 3 REMARK 465 SER C 4 REMARK 465 HIS C 5 REMARK 465 HIS C 6 REMARK 465 HIS C 7 REMARK 465 HIS C 8 REMARK 465 HIS C 9 REMARK 465 HIS C 10 REMARK 465 ARG C 11 REMARK 465 SER C 12 REMARK 465 PRO C 13 REMARK 465 SER C 14 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 588 O HOH C 616 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 18 CB GLU A 18 CG -0.115 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 84 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG A 84 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 LEU B 35 CB - CG - CD1 ANGL. DEV. = 14.1 DEGREES REMARK 500 ARG B 84 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG B 84 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG C 84 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 93 52.45 -119.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EOD B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2BRJ RELATED DB: PDB REMARK 900 HIGHER RESOLUTION STRUCTURE OF SEMET LABELLED AOC2 REMARK 900 RELATED ID: 2GIN RELATED DB: PDB REMARK 900 STRUCTURE OF UNLABELLED AOC2 REMARK 900 RELATED ID: 1Z8K RELATED DB: PDB REMARK 900 STRUCTURE OF AOC2 SOLVED BY THE CESG STRUCTURAL GENOMICS REMARK 900 CONSORTIUM DBREF 2DIO A 13 188 UNP Q9LS02 AOC2_ARATH 78 253 DBREF 2DIO B 13 188 UNP Q9LS02 AOC2_ARATH 78 253 DBREF 2DIO C 13 188 UNP Q9LS02 AOC2_ARATH 78 253 SEQADV 2DIO MET A 1 UNP Q9LS02 INITIATING METHIONINE SEQADV 2DIO ARG A 2 UNP Q9LS02 CLONING ARTIFACT SEQADV 2DIO GLY A 3 UNP Q9LS02 CLONING ARTIFACT SEQADV 2DIO SER A 4 UNP Q9LS02 CLONING ARTIFACT SEQADV 2DIO HIS A 5 UNP Q9LS02 EXPRESSION TAG SEQADV 2DIO HIS A 6 UNP Q9LS02 EXPRESSION TAG SEQADV 2DIO HIS A 7 UNP Q9LS02 EXPRESSION TAG SEQADV 2DIO HIS A 8 UNP Q9LS02 EXPRESSION TAG SEQADV 2DIO HIS A 9 UNP Q9LS02 EXPRESSION TAG SEQADV 2DIO HIS A 10 UNP Q9LS02 EXPRESSION TAG SEQADV 2DIO ARG A 11 UNP Q9LS02 CLONING ARTIFACT SEQADV 2DIO SER A 12 UNP Q9LS02 CLONING ARTIFACT SEQADV 2DIO MSE A 42 UNP Q9LS02 MET 107 MODIFIED RESIDUE SEQADV 2DIO MET B 1 UNP Q9LS02 INITIATING METHIONINE SEQADV 2DIO ARG B 2 UNP Q9LS02 CLONING ARTIFACT SEQADV 2DIO GLY B 3 UNP Q9LS02 CLONING ARTIFACT SEQADV 2DIO SER B 4 UNP Q9LS02 CLONING ARTIFACT SEQADV 2DIO HIS B 5 UNP Q9LS02 EXPRESSION TAG SEQADV 2DIO HIS B 6 UNP Q9LS02 EXPRESSION TAG SEQADV 2DIO HIS B 7 UNP Q9LS02 EXPRESSION TAG SEQADV 2DIO HIS B 8 UNP Q9LS02 EXPRESSION TAG SEQADV 2DIO HIS B 9 UNP Q9LS02 EXPRESSION TAG SEQADV 2DIO HIS B 10 UNP Q9LS02 EXPRESSION TAG SEQADV 2DIO ARG B 11 UNP Q9LS02 CLONING ARTIFACT SEQADV 2DIO SER B 12 UNP Q9LS02 CLONING ARTIFACT SEQADV 2DIO MSE B 42 UNP Q9LS02 MET 107 MODIFIED RESIDUE SEQADV 2DIO MET C 1 UNP Q9LS02 INITIATING METHIONINE SEQADV 2DIO ARG C 2 UNP Q9LS02 CLONING ARTIFACT SEQADV 2DIO GLY C 3 UNP Q9LS02 CLONING ARTIFACT SEQADV 2DIO SER C 4 UNP Q9LS02 CLONING ARTIFACT SEQADV 2DIO HIS C 5 UNP Q9LS02 EXPRESSION TAG SEQADV 2DIO HIS C 6 UNP Q9LS02 EXPRESSION TAG SEQADV 2DIO HIS C 7 UNP Q9LS02 EXPRESSION TAG SEQADV 2DIO HIS C 8 UNP Q9LS02 EXPRESSION TAG SEQADV 2DIO HIS C 9 UNP Q9LS02 EXPRESSION TAG SEQADV 2DIO HIS C 10 UNP Q9LS02 EXPRESSION TAG SEQADV 2DIO ARG C 11 UNP Q9LS02 CLONING ARTIFACT SEQADV 2DIO SER C 12 UNP Q9LS02 CLONING ARTIFACT SEQADV 2DIO MSE C 42 UNP Q9LS02 MET 107 MODIFIED RESIDUE SEQRES 1 A 188 MET ARG GLY SER HIS HIS HIS HIS HIS HIS ARG SER PRO SEQRES 2 A 188 SER LYS VAL GLN GLU LEU SER VAL TYR GLU ILE ASN GLU SEQRES 3 A 188 LEU ASP ARG HIS SER PRO LYS ILE LEU LYS ASN ALA PHE SEQRES 4 A 188 SER LEU MSE PHE GLY LEU GLY ASP LEU VAL PRO PHE THR SEQRES 5 A 188 ASN LYS LEU TYR THR GLY ASP LEU LYS LYS ARG VAL GLY SEQRES 6 A 188 ILE THR ALA GLY LEU CYS VAL VAL ILE GLU HIS VAL PRO SEQRES 7 A 188 GLU LYS LYS GLY GLU ARG PHE GLU ALA THR TYR SER PHE SEQRES 8 A 188 TYR PHE GLY ASP TYR GLY HIS LEU SER VAL GLN GLY PRO SEQRES 9 A 188 TYR LEU THR TYR GLU ASP SER PHE LEU ALA ILE THR GLY SEQRES 10 A 188 GLY ALA GLY ILE PHE GLU GLY ALA TYR GLY GLN VAL LYS SEQRES 11 A 188 LEU GLN GLN LEU VAL TYR PRO THR LYS LEU PHE TYR THR SEQRES 12 A 188 PHE TYR LEU LYS GLY LEU ALA ASN ASP LEU PRO LEU GLU SEQRES 13 A 188 LEU THR GLY THR PRO VAL PRO PRO SER LYS ASP ILE GLU SEQRES 14 A 188 PRO ALA PRO GLU ALA LYS ALA LEU GLU PRO SER GLY VAL SEQRES 15 A 188 ILE SER ASN TYR THR ASN SEQRES 1 B 188 MET ARG GLY SER HIS HIS HIS HIS HIS HIS ARG SER PRO SEQRES 2 B 188 SER LYS VAL GLN GLU LEU SER VAL TYR GLU ILE ASN GLU SEQRES 3 B 188 LEU ASP ARG HIS SER PRO LYS ILE LEU LYS ASN ALA PHE SEQRES 4 B 188 SER LEU MSE PHE GLY LEU GLY ASP LEU VAL PRO PHE THR SEQRES 5 B 188 ASN LYS LEU TYR THR GLY ASP LEU LYS LYS ARG VAL GLY SEQRES 6 B 188 ILE THR ALA GLY LEU CYS VAL VAL ILE GLU HIS VAL PRO SEQRES 7 B 188 GLU LYS LYS GLY GLU ARG PHE GLU ALA THR TYR SER PHE SEQRES 8 B 188 TYR PHE GLY ASP TYR GLY HIS LEU SER VAL GLN GLY PRO SEQRES 9 B 188 TYR LEU THR TYR GLU ASP SER PHE LEU ALA ILE THR GLY SEQRES 10 B 188 GLY ALA GLY ILE PHE GLU GLY ALA TYR GLY GLN VAL LYS SEQRES 11 B 188 LEU GLN GLN LEU VAL TYR PRO THR LYS LEU PHE TYR THR SEQRES 12 B 188 PHE TYR LEU LYS GLY LEU ALA ASN ASP LEU PRO LEU GLU SEQRES 13 B 188 LEU THR GLY THR PRO VAL PRO PRO SER LYS ASP ILE GLU SEQRES 14 B 188 PRO ALA PRO GLU ALA LYS ALA LEU GLU PRO SER GLY VAL SEQRES 15 B 188 ILE SER ASN TYR THR ASN SEQRES 1 C 188 MET ARG GLY SER HIS HIS HIS HIS HIS HIS ARG SER PRO SEQRES 2 C 188 SER LYS VAL GLN GLU LEU SER VAL TYR GLU ILE ASN GLU SEQRES 3 C 188 LEU ASP ARG HIS SER PRO LYS ILE LEU LYS ASN ALA PHE SEQRES 4 C 188 SER LEU MSE PHE GLY LEU GLY ASP LEU VAL PRO PHE THR SEQRES 5 C 188 ASN LYS LEU TYR THR GLY ASP LEU LYS LYS ARG VAL GLY SEQRES 6 C 188 ILE THR ALA GLY LEU CYS VAL VAL ILE GLU HIS VAL PRO SEQRES 7 C 188 GLU LYS LYS GLY GLU ARG PHE GLU ALA THR TYR SER PHE SEQRES 8 C 188 TYR PHE GLY ASP TYR GLY HIS LEU SER VAL GLN GLY PRO SEQRES 9 C 188 TYR LEU THR TYR GLU ASP SER PHE LEU ALA ILE THR GLY SEQRES 10 C 188 GLY ALA GLY ILE PHE GLU GLY ALA TYR GLY GLN VAL LYS SEQRES 11 C 188 LEU GLN GLN LEU VAL TYR PRO THR LYS LEU PHE TYR THR SEQRES 12 C 188 PHE TYR LEU LYS GLY LEU ALA ASN ASP LEU PRO LEU GLU SEQRES 13 C 188 LEU THR GLY THR PRO VAL PRO PRO SER LYS ASP ILE GLU SEQRES 14 C 188 PRO ALA PRO GLU ALA LYS ALA LEU GLU PRO SER GLY VAL SEQRES 15 C 188 ILE SER ASN TYR THR ASN MODRES 2DIO MSE A 42 MET SELENOMETHIONINE MODRES 2DIO MSE B 42 MET SELENOMETHIONINE MODRES 2DIO MSE C 42 MET SELENOMETHIONINE HET MSE A 42 13 HET MSE B 42 13 HET MSE C 42 13 HET EOD B 401 21 HET GOL C 501 6 HET GOL B 502 6 HET GOL A 503 6 HET GOL A 504 6 HET GOL C 505 6 HETNAM MSE SELENOMETHIONINE HETNAM EOD 11-[(2R,3S)-3-PENTYLOXIRAN-2-YL]UNDECANOIC ACID HETNAM GOL GLYCEROL HETSYN EOD (+-)-CIS-12,13-EPOXY-9(Z)-OCTADECANOIC ACID, LEUKOTOXIN HETSYN 2 EOD B, (+-)-VERNOLIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 4 EOD C18 H34 O3 FORMUL 5 GOL 5(C3 H8 O3) FORMUL 10 HOH *368(H2 O) HELIX 1 1 PRO A 78 LYS A 81 5 4 HELIX 2 2 PRO A 154 THR A 158 5 5 HELIX 3 3 ALA A 171 ALA A 176 1 6 HELIX 4 4 GLU A 178 VAL A 182 5 5 HELIX 5 5 PRO B 78 LYS B 81 5 4 HELIX 6 6 PRO B 154 THR B 158 5 5 HELIX 7 7 ALA B 171 ALA B 176 1 6 HELIX 8 8 GLU B 178 VAL B 182 5 5 HELIX 9 9 PRO C 78 LYS C 81 5 4 HELIX 10 10 PRO C 154 THR C 158 5 5 HELIX 11 11 ALA C 171 ALA C 176 1 6 HELIX 12 12 GLU C 178 VAL C 182 5 5 SHEET 1 A10 LEU A 48 PHE A 51 0 SHEET 2 A10 ARG A 63 VAL A 77 -1 O CYS A 71 N VAL A 49 SHEET 3 A10 GLY A 82 TYR A 92 -1 O TYR A 92 N ILE A 66 SHEET 4 A10 GLY A 97 LEU A 106 -1 O GLY A 103 N ALA A 87 SHEET 5 A10 SER A 111 GLY A 120 -1 O ALA A 114 N GLN A 102 SHEET 6 A10 TYR A 126 VAL A 135 -1 O LEU A 131 N SER A 111 SHEET 7 A10 LYS A 139 LYS A 147 -1 O PHE A 141 N GLN A 132 SHEET 8 A10 GLN A 17 ILE A 24 -1 N LEU A 19 O PHE A 144 SHEET 9 A10 LYS A 54 THR A 57 -1 O TYR A 56 N TYR A 22 SHEET 10 A10 ARG A 63 VAL A 77 -1 O VAL A 64 N LEU A 55 SHEET 1 B10 LEU B 48 PHE B 51 0 SHEET 2 B10 ARG B 63 VAL B 77 -1 O CYS B 71 N VAL B 49 SHEET 3 B10 GLY B 82 TYR B 92 -1 O GLU B 86 N VAL B 72 SHEET 4 B10 GLY B 97 LEU B 106 -1 O GLY B 103 N ALA B 87 SHEET 5 B10 SER B 111 GLY B 120 -1 O GLY B 117 N SER B 100 SHEET 6 B10 TYR B 126 VAL B 135 -1 O LEU B 131 N SER B 111 SHEET 7 B10 LYS B 139 LYS B 147 -1 O PHE B 141 N GLN B 132 SHEET 8 B10 GLN B 17 ILE B 24 -1 N LEU B 19 O PHE B 144 SHEET 9 B10 LYS B 54 THR B 57 -1 O TYR B 56 N TYR B 22 SHEET 10 B10 ARG B 63 VAL B 77 -1 O VAL B 64 N LEU B 55 SHEET 1 C10 LEU C 48 PHE C 51 0 SHEET 2 C10 ARG C 63 VAL C 77 -1 O CYS C 71 N VAL C 49 SHEET 3 C10 GLY C 82 TYR C 92 -1 O TYR C 92 N ILE C 66 SHEET 4 C10 GLY C 97 LEU C 106 -1 O TYR C 105 N PHE C 85 SHEET 5 C10 SER C 111 GLY C 120 -1 O GLY C 117 N SER C 100 SHEET 6 C10 TYR C 126 VAL C 135 -1 O LEU C 131 N SER C 111 SHEET 7 C10 LYS C 139 LYS C 147 -1 O PHE C 141 N GLN C 132 SHEET 8 C10 GLN C 17 ILE C 24 -1 N LEU C 19 O PHE C 144 SHEET 9 C10 LYS C 54 THR C 57 -1 O TYR C 56 N TYR C 22 SHEET 10 C10 ARG C 63 VAL C 77 -1 O GLY C 65 N LEU C 55 LINK C LEU A 41 N MSE A 42 1555 1555 1.34 LINK C MSE A 42 N PHE A 43 1555 1555 1.33 LINK C LEU B 41 N MSE B 42 1555 1555 1.33 LINK C MSE B 42 N PHE B 43 1555 1555 1.33 LINK C LEU C 41 N MSE C 42 1555 1555 1.35 LINK C MSE C 42 N PHE C 43 1555 1555 1.32 CISPEP 1 SER A 31 PRO A 32 0 3.23 CISPEP 2 TYR A 136 PRO A 137 0 -1.73 CISPEP 3 SER B 31 PRO B 32 0 -1.79 CISPEP 4 TYR B 136 PRO B 137 0 -9.49 CISPEP 5 SER C 31 PRO C 32 0 -3.35 CISPEP 6 TYR C 136 PRO C 137 0 -9.28 SITE 1 AC1 11 GLU B 23 PRO B 32 VAL B 49 PHE B 51 SITE 2 AC1 11 ASN B 53 PHE B 85 TYR B 89 TYR B 105 SITE 3 AC1 11 TYR B 136 TYR B 142 HOH B 530 SITE 1 AC2 7 ASN A 37 ASN B 37 LEU C 35 ASN C 37 SITE 2 AC2 7 HOH C 565 HOH C 569 HOH C 573 SITE 1 AC3 5 ASP B 28 ARG B 29 LYS B 54 ASN B 188 SITE 2 AC3 5 HOH B 602 SITE 1 AC4 4 ASP A 28 ARG A 29 LYS A 54 ASN A 188 SITE 1 AC5 9 GLU A 75 HIS A 76 PRO A 78 GLU A 79 SITE 2 AC5 9 HOH A 609 HOH A 619 ARG C 29 ASN C 188 SITE 3 AC5 9 GOL C 505 SITE 1 AC6 6 GOL A 504 ASP C 28 ARG C 29 LYS C 54 SITE 2 AC6 6 ASN C 188 HOH C 608 CRYST1 64.500 99.800 105.900 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015500 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010020 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009440 0.00000 MASTER 388 0 9 12 30 0 13 6 0 0 0 45 END