HEADER RNA BINDING PROTEIN 15-MAR-06 2DGP TITLE SOLUTION STRUCTURE OF THE N-TERMINAL RNA BINDING DOMAIN IN TITLE 2 BRUNO-LIKE 4 RNA-BINDING PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: BRUNO-LIKE 4, RNA BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RNA RECOGNITION MOTIF; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BRUNOL4; SOURCE 6 EXPRESSION_SYSTEM: CELL FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P050704-05; SOURCE 9 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS RRM DOMAIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT KEYWDS 2 ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, RNA KEYWDS 4 BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.ABE,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 3 (RSGI) REVDAT 2 24-FEB-09 2DGP 1 VERSN REVDAT 1 15-SEP-06 2DGP 0 JRNL AUTH C.ABE,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE N-TERMINAL RNA BINDING JRNL TITL 2 DOMAIN IN BRUNO-LIKE 4 RNA-BINDING PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DGP COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-MAR-06. REMARK 100 THE RCSB ID CODE IS RCSB025397. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 100MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20MM D-TRIS-HCL(PH7.0), 100MM REMARK 210 NACL, 1MM D-DTT, 0.02% NAN3, REMARK 210 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.932, CYANA 2.0 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINTED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 60 42.89 72.22 REMARK 500 1 ARG A 63 41.97 -86.73 REMARK 500 1 LEU A 86 103.98 -49.52 REMARK 500 1 PHE A 90 -71.63 -105.89 REMARK 500 1 MET A 93 -36.96 -33.86 REMARK 500 1 LYS A 95 35.76 -83.34 REMARK 500 1 HIS A 116 137.40 -34.88 REMARK 500 1 GLU A 117 37.36 34.63 REMARK 500 1 PRO A 127 -178.44 -69.70 REMARK 500 1 ALA A 133 48.80 -79.29 REMARK 500 2 SER A 46 173.46 -56.31 REMARK 500 2 HIS A 51 -36.29 -36.17 REMARK 500 2 ARG A 63 42.35 -88.63 REMARK 500 2 LEU A 73 -70.61 -43.76 REMARK 500 2 ILE A 80 162.01 -40.20 REMARK 500 2 TYR A 81 -35.89 -131.95 REMARK 500 2 GLU A 82 114.32 -166.73 REMARK 500 2 LEU A 86 113.57 -39.03 REMARK 500 2 PHE A 90 -73.03 -120.35 REMARK 500 2 LYS A 95 151.74 -49.50 REMARK 500 2 GLN A 118 -43.45 -130.59 REMARK 500 2 PRO A 127 -177.51 -69.69 REMARK 500 2 ALA A 133 -36.18 -37.47 REMARK 500 2 SER A 135 116.45 -173.22 REMARK 500 2 ARG A 138 43.57 36.09 REMARK 500 2 SER A 144 44.66 -82.60 REMARK 500 3 LYS A 49 140.56 -34.79 REMARK 500 3 ASP A 50 -60.43 -108.02 REMARK 500 3 HIS A 51 -60.63 -98.69 REMARK 500 3 ASP A 52 148.93 -171.12 REMARK 500 3 ARG A 63 40.18 -81.58 REMARK 500 3 LEU A 73 -72.14 -42.89 REMARK 500 3 GLU A 82 114.34 -170.74 REMARK 500 3 LEU A 86 101.07 -45.05 REMARK 500 3 PHE A 90 -64.49 -106.66 REMARK 500 3 THR A 91 -33.30 -134.36 REMARK 500 3 MET A 93 -39.90 -35.23 REMARK 500 3 LYS A 95 36.50 -91.27 REMARK 500 3 PRO A 127 -176.57 -69.82 REMARK 500 3 PRO A 143 97.00 -69.74 REMARK 500 4 HIS A 51 -56.64 -121.83 REMARK 500 4 ARG A 63 43.03 -79.92 REMARK 500 4 LEU A 73 -71.82 -42.98 REMARK 500 4 GLU A 75 -30.47 -36.00 REMARK 500 4 ILE A 80 146.48 -36.19 REMARK 500 4 GLU A 82 112.86 -167.84 REMARK 500 4 MET A 93 101.64 -53.97 REMARK 500 4 LEU A 121 150.80 -41.62 REMARK 500 4 PRO A 127 -172.92 -69.74 REMARK 500 4 SER A 137 -54.09 -126.70 REMARK 500 5 SER A 46 149.49 -39.84 REMARK 500 5 ARG A 63 41.29 -81.27 REMARK 500 5 LEU A 73 -72.21 -41.86 REMARK 500 5 GLU A 75 -29.64 -39.18 REMARK 500 5 ILE A 80 149.43 -39.80 REMARK 500 5 GLU A 82 113.07 -162.70 REMARK 500 5 LEU A 86 104.58 -53.41 REMARK 500 5 THR A 91 -31.65 -131.91 REMARK 500 5 GLU A 117 38.48 39.21 REMARK 500 5 PRO A 127 -178.90 -69.77 REMARK 500 5 ALA A 133 80.96 -69.80 REMARK 500 5 SER A 137 44.69 -82.11 REMARK 500 5 PRO A 143 1.07 -69.84 REMARK 500 6 ASP A 50 109.07 -34.34 REMARK 500 6 ARG A 63 41.39 -80.01 REMARK 500 6 LEU A 73 -72.13 -43.91 REMARK 500 6 ILE A 80 149.82 -37.98 REMARK 500 6 GLU A 82 112.97 -165.95 REMARK 500 6 ASP A 88 179.62 -49.71 REMARK 500 6 PHE A 90 -70.25 -111.39 REMARK 500 6 MET A 93 101.91 -53.13 REMARK 500 6 HIS A 94 55.04 74.21 REMARK 500 6 LYS A 110 -70.21 -41.91 REMARK 500 6 LEU A 121 152.54 -46.99 REMARK 500 6 PRO A 127 -174.53 -69.75 REMARK 500 6 GLU A 136 42.82 -84.82 REMARK 500 7 LYS A 49 101.76 -58.88 REMARK 500 7 ASP A 52 132.30 -174.38 REMARK 500 7 ARG A 63 42.08 -84.57 REMARK 500 7 LEU A 73 -72.62 -37.70 REMARK 500 7 GLU A 75 -28.95 -36.52 REMARK 500 7 GLU A 82 112.87 -168.26 REMARK 500 7 PHE A 90 -74.64 -104.55 REMARK 500 7 LYS A 110 -70.06 -44.82 REMARK 500 7 PRO A 127 -179.95 -69.75 REMARK 500 7 ASP A 134 158.96 -41.62 REMARK 500 7 PRO A 143 86.01 -69.70 REMARK 500 7 SER A 144 59.42 -92.61 REMARK 500 8 ASP A 52 100.16 -47.92 REMARK 500 8 ARG A 63 43.15 -79.54 REMARK 500 8 LEU A 73 -72.81 -42.15 REMARK 500 8 GLU A 75 -28.25 -37.16 REMARK 500 8 LYS A 79 80.36 -65.68 REMARK 500 8 ILE A 80 151.21 -36.86 REMARK 500 8 GLU A 82 112.91 -160.32 REMARK 500 8 PHE A 90 -68.97 -100.32 REMARK 500 8 MET A 93 -29.81 -36.50 REMARK 500 8 HIS A 94 111.05 -163.97 REMARK 500 8 PRO A 143 99.01 -69.78 REMARK 500 9 SER A 43 109.92 -43.72 REMARK 500 9 ASP A 52 102.49 -56.13 REMARK 500 9 ARG A 63 42.56 -85.05 REMARK 500 9 LEU A 73 -72.74 -39.80 REMARK 500 9 GLU A 75 -27.05 -39.69 REMARK 500 9 ILE A 80 155.77 -49.51 REMARK 500 9 GLU A 82 112.87 -172.03 REMARK 500 9 LEU A 86 109.59 -51.18 REMARK 500 9 GLN A 112 -70.35 -58.24 REMARK 500 9 GLN A 118 -33.71 -131.65 REMARK 500 9 LEU A 121 151.32 -48.35 REMARK 500 9 PRO A 127 -178.21 -69.70 REMARK 500 9 ALA A 133 84.69 -53.87 REMARK 500 9 SER A 144 148.57 -171.03 REMARK 500 10 SER A 42 98.96 -52.42 REMARK 500 10 MET A 48 -72.13 -80.47 REMARK 500 10 ASP A 52 142.06 -173.12 REMARK 500 10 ARG A 63 44.87 -98.34 REMARK 500 10 LEU A 73 -72.75 -41.96 REMARK 500 10 GLU A 82 112.85 -171.58 REMARK 500 10 ASP A 88 -179.45 -66.43 REMARK 500 10 PHE A 90 -71.51 -128.86 REMARK 500 10 GLU A 117 36.02 38.75 REMARK 500 10 LEU A 121 152.94 -41.39 REMARK 500 10 PRO A 127 -169.52 -69.74 REMARK 500 11 SER A 43 118.27 -172.18 REMARK 500 11 MET A 48 121.51 -174.00 REMARK 500 11 ALA A 53 151.93 -36.41 REMARK 500 11 PRO A 62 -176.80 -69.78 REMARK 500 11 LEU A 73 -72.44 -44.62 REMARK 500 11 ILE A 80 160.09 -48.71 REMARK 500 11 GLU A 82 112.63 -169.76 REMARK 500 11 PHE A 90 -74.43 -107.91 REMARK 500 11 MET A 93 -37.51 -30.99 REMARK 500 11 GLU A 117 47.19 39.92 REMARK 500 11 GLN A 118 -51.82 -130.49 REMARK 500 12 MET A 48 109.28 -162.94 REMARK 500 12 LYS A 49 162.65 -44.90 REMARK 500 12 PRO A 62 -168.24 -69.79 REMARK 500 12 LEU A 73 -71.87 -45.33 REMARK 500 12 ILE A 80 143.16 -36.50 REMARK 500 12 LEU A 86 92.68 -56.08 REMARK 500 12 PHE A 90 -70.43 -116.94 REMARK 500 12 MET A 93 -38.83 -34.07 REMARK 500 12 HIS A 116 128.15 -35.45 REMARK 500 12 GLU A 117 46.91 39.55 REMARK 500 12 GLN A 118 -53.70 -133.99 REMARK 500 12 PRO A 127 -179.42 -69.77 REMARK 500 12 SER A 144 149.74 -39.72 REMARK 500 13 ASP A 52 90.02 -64.44 REMARK 500 13 ARG A 63 44.26 -92.93 REMARK 500 13 LEU A 73 -73.97 -38.78 REMARK 500 13 GLU A 75 -30.13 -36.17 REMARK 500 13 GLU A 82 112.76 -160.85 REMARK 500 13 LEU A 86 100.99 -48.78 REMARK 500 13 PHE A 90 -69.55 -105.03 REMARK 500 13 GLN A 118 -42.24 -134.93 REMARK 500 14 GLN A 60 45.30 71.10 REMARK 500 14 ARG A 63 41.15 -80.94 REMARK 500 14 LEU A 73 -72.32 -43.28 REMARK 500 14 ILE A 80 154.24 -44.13 REMARK 500 14 GLU A 82 112.74 -164.02 REMARK 500 14 PHE A 90 -75.04 -121.25 REMARK 500 14 MET A 93 -36.58 -35.77 REMARK 500 14 GLU A 117 33.88 36.22 REMARK 500 15 ARG A 63 42.17 -79.52 REMARK 500 15 LEU A 73 -70.67 -40.31 REMARK 500 15 GLU A 75 -35.74 -37.79 REMARK 500 15 ILE A 80 152.99 -41.38 REMARK 500 15 GLU A 82 113.10 -168.44 REMARK 500 15 LEU A 86 104.27 -55.06 REMARK 500 15 PHE A 90 -75.27 -105.28 REMARK 500 15 MET A 93 97.11 -59.94 REMARK 500 15 HIS A 94 54.93 71.64 REMARK 500 15 LYS A 110 -70.18 -54.73 REMARK 500 15 GLU A 117 40.33 36.38 REMARK 500 15 GLU A 136 39.03 34.45 REMARK 500 16 SER A 42 -53.61 -134.87 REMARK 500 16 ARG A 63 43.38 -79.53 REMARK 500 16 LEU A 73 -72.77 -52.55 REMARK 500 16 LEU A 86 109.50 -37.19 REMARK 500 16 PHE A 90 -73.64 -134.98 REMARK 500 16 THR A 91 -39.34 -135.04 REMARK 500 16 MET A 93 119.47 -36.74 REMARK 500 16 HIS A 94 54.91 70.75 REMARK 500 16 SER A 107 -37.01 -39.55 REMARK 500 16 GLU A 117 45.22 35.66 REMARK 500 16 GLN A 118 -42.11 -133.69 REMARK 500 16 PRO A 127 -175.35 -69.72 REMARK 500 16 ALA A 133 90.08 -63.29 REMARK 500 16 ASP A 134 76.44 -118.22 REMARK 500 17 ARG A 63 42.50 -86.54 REMARK 500 17 GLU A 75 -33.98 -37.13 REMARK 500 17 ILE A 80 157.55 -37.92 REMARK 500 17 GLU A 82 113.18 -171.90 REMARK 500 17 PHE A 90 -71.93 -112.08 REMARK 500 17 GLN A 118 -39.49 -133.69 REMARK 500 17 SER A 135 111.46 -161.55 REMARK 500 18 SER A 43 42.24 37.92 REMARK 500 18 MET A 48 142.29 -171.66 REMARK 500 18 PRO A 62 -172.39 -69.86 REMARK 500 18 LEU A 73 -73.01 -38.28 REMARK 500 18 GLU A 75 -31.97 -35.75 REMARK 500 18 ILE A 80 153.43 -41.63 REMARK 500 18 GLU A 82 112.76 -174.89 REMARK 500 18 PHE A 90 -65.52 -109.88 REMARK 500 18 THR A 91 -31.99 -133.54 REMARK 500 18 MET A 93 94.40 -52.36 REMARK 500 18 HIS A 94 53.87 71.23 REMARK 500 18 GLU A 117 45.11 37.15 REMARK 500 18 GLN A 118 -47.57 -130.20 REMARK 500 18 PRO A 127 -167.43 -69.77 REMARK 500 19 ARG A 63 41.99 -80.95 REMARK 500 19 LEU A 73 -74.77 -42.10 REMARK 500 19 GLU A 82 114.08 -167.57 REMARK 500 19 LEU A 86 85.22 -65.29 REMARK 500 19 THR A 91 -41.01 -133.17 REMARK 500 19 MET A 93 109.52 -59.50 REMARK 500 19 GLN A 112 -71.24 -70.18 REMARK 500 19 GLN A 118 -45.99 -133.48 REMARK 500 19 PRO A 127 -169.93 -69.77 REMARK 500 19 SER A 144 41.67 -95.37 REMARK 500 20 SER A 42 174.44 -52.99 REMARK 500 20 SER A 43 -61.08 -122.13 REMARK 500 20 ASP A 52 98.12 -54.46 REMARK 500 20 GLN A 60 38.93 34.83 REMARK 500 20 ARG A 63 42.57 -87.78 REMARK 500 20 LEU A 73 -72.44 -45.54 REMARK 500 20 LYS A 79 82.01 -69.39 REMARK 500 20 ILE A 80 153.83 -41.23 REMARK 500 20 LEU A 86 91.94 -41.42 REMARK 500 20 PHE A 90 -73.47 -114.91 REMARK 500 20 MET A 93 -32.74 -35.43 REMARK 500 20 PRO A 127 -167.22 -69.81 REMARK 500 20 ALA A 133 97.26 -41.68 REMARK 500 20 PRO A 143 -176.46 -69.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSI002003720.1 RELATED DB: TARGETDB DBREF 2DGP A 48 141 UNP Q9BQ96 Q9BQ96_HUMAN 48 141 SEQADV 2DGP GLY A 41 UNP Q9BQ96 CLONING ARTIFACT SEQADV 2DGP SER A 42 UNP Q9BQ96 CLONING ARTIFACT SEQADV 2DGP SER A 43 UNP Q9BQ96 CLONING ARTIFACT SEQADV 2DGP GLY A 44 UNP Q9BQ96 CLONING ARTIFACT SEQADV 2DGP SER A 45 UNP Q9BQ96 CLONING ARTIFACT SEQADV 2DGP SER A 46 UNP Q9BQ96 CLONING ARTIFACT SEQADV 2DGP GLY A 47 UNP Q9BQ96 CLONING ARTIFACT SEQADV 2DGP GLY A 142 UNP Q9BQ96 CLONING ARTIFACT SEQADV 2DGP PRO A 143 UNP Q9BQ96 CLONING ARTIFACT SEQADV 2DGP SER A 144 UNP Q9BQ96 CLONING ARTIFACT SEQADV 2DGP SER A 145 UNP Q9BQ96 CLONING ARTIFACT SEQADV 2DGP GLY A 146 UNP Q9BQ96 CLONING ARTIFACT SEQRES 1 A 106 GLY SER SER GLY SER SER GLY MET LYS ASP HIS ASP ALA SEQRES 2 A 106 ILE LYS LEU PHE ILE GLY GLN ILE PRO ARG ASN LEU ASP SEQRES 3 A 106 GLU LYS ASP LEU LYS PRO LEU PHE GLU GLU PHE GLY LYS SEQRES 4 A 106 ILE TYR GLU LEU THR VAL LEU LYS ASP ARG PHE THR GLY SEQRES 5 A 106 MET HIS LYS GLY CYS ALA PHE LEU THR TYR CYS GLU ARG SEQRES 6 A 106 GLU SER ALA LEU LYS ALA GLN SER ALA LEU HIS GLU GLN SEQRES 7 A 106 LYS THR LEU PRO GLY MET ASN ARG PRO ILE GLN VAL LYS SEQRES 8 A 106 PRO ALA ASP SER GLU SER ARG GLY GLY SER GLY PRO SER SEQRES 9 A 106 SER GLY HELIX 1 1 ASP A 66 GLY A 78 1 13 HELIX 2 2 GLU A 104 HIS A 116 1 13 SHEET 1 A 4 GLU A 82 THR A 84 0 SHEET 2 A 4 CYS A 97 TYR A 102 -1 O PHE A 99 N THR A 84 SHEET 3 A 4 ILE A 54 GLY A 59 -1 N LEU A 56 O LEU A 100 SHEET 4 A 4 GLN A 129 PRO A 132 -1 O LYS A 131 N PHE A 57 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 309 0 0 2 4 0 0 6 0 0 0 9 END