HEADER RNA BINDING PROTEIN 15-MAR-06 2DGO TITLE SOLUTION STRUCTURE OF THE RNA BINDING DOMAIN IN CYTOTOXIC TITLE 2 GRANULE-ASSOCIATED RNA BINDING PROTEIN 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOTOXIC GRANULE-ASSOCIATED RNA BINDING PROTEIN COMPND 3 1; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: RNA RECOGNITION MOTIF; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: TIA1; SOURCE 6 EXPRESSION_SYSTEM: CELL FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P050425-20; SOURCE 9 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS RRM DOMAIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT KEYWDS 2 ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, RNA KEYWDS 4 BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.ABE,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 3 (RSGI) REVDAT 2 24-FEB-09 2DGO 1 VERSN REVDAT 1 15-SEP-06 2DGO 0 JRNL AUTH C.ABE,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE RNA BINDING DOMAIN IN JRNL TITL 2 CYTOTOXIC GRANULE-ASSOCIATED RNA BINDING PROTEIN 1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0 REMARK 3 AUTHORS : GUNTERT,P REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DGO COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-MAR-06. REMARK 100 THE RCSB ID CODE IS RCSB025396. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 100MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20MM D-TRIS-HCL(PH7.0), 100MM REMARK 210 NACL, 1MM D-DTT, 0.02% NAN3, REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.932, CYANA 2.0 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINTED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION,STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 65 106.41 -52.24 REMARK 500 1 GLN A 70 91.77 -57.18 REMARK 500 1 ASP A 73 73.91 -115.10 REMARK 500 1 THR A 74 45.43 36.63 REMARK 500 1 ASN A 76 50.13 -98.72 REMARK 500 1 SER A 105 -64.53 -103.28 REMARK 500 1 ILE A 136 -34.45 -38.60 REMARK 500 2 THR A 74 46.58 -104.39 REMARK 500 2 ASN A 76 47.44 -104.98 REMARK 500 2 SER A 105 -63.73 -109.68 REMARK 500 2 SER A 118 105.64 -51.80 REMARK 500 2 PRO A 159 -176.29 -69.77 REMARK 500 2 TYR A 165 143.02 -173.79 REMARK 500 3 ASP A 73 43.75 -107.05 REMARK 500 3 THR A 74 45.30 35.80 REMARK 500 3 ASN A 76 54.65 -109.03 REMARK 500 3 SER A 105 -61.83 -107.33 REMARK 500 3 ASP A 131 -39.11 -35.80 REMARK 500 3 ILE A 136 -36.40 -38.76 REMARK 500 3 GLU A 166 145.51 -171.94 REMARK 500 4 ASN A 76 51.96 -113.02 REMARK 500 4 SER A 105 -62.91 -106.73 REMARK 500 4 ALA A 154 41.58 -85.67 REMARK 500 4 LYS A 162 108.36 -37.43 REMARK 500 4 SER A 175 122.61 -170.60 REMARK 500 5 LYS A 72 43.21 -96.33 REMARK 500 5 PRO A 161 93.99 -69.75 REMARK 500 5 SER A 167 43.04 -107.27 REMARK 500 6 SER A 65 -61.70 -90.38 REMARK 500 6 LYS A 72 133.89 -174.93 REMARK 500 6 THR A 74 53.26 35.22 REMARK 500 6 ASN A 76 50.38 -110.33 REMARK 500 6 SER A 118 109.03 -51.77 REMARK 500 6 ASN A 168 129.24 -173.65 REMARK 500 7 SER A 64 42.16 34.60 REMARK 500 7 GLN A 70 170.03 -50.78 REMARK 500 7 SER A 105 -60.76 -109.86 REMARK 500 7 ILE A 136 -35.32 -37.76 REMARK 500 7 GLN A 142 -177.26 -56.64 REMARK 500 7 ASN A 168 170.61 -59.27 REMARK 500 8 SER A 65 115.89 -36.71 REMARK 500 8 SER A 105 -61.98 -102.50 REMARK 500 8 GLN A 142 179.88 -55.01 REMARK 500 8 PRO A 161 98.26 -69.76 REMARK 500 9 THR A 74 39.72 -90.93 REMARK 500 9 SER A 118 102.09 -54.92 REMARK 500 9 ASN A 168 118.82 -165.88 REMARK 500 10 SER A 67 -50.51 -123.45 REMARK 500 10 LYS A 72 49.40 -80.19 REMARK 500 10 ASP A 73 33.99 -94.91 REMARK 500 10 THR A 74 75.74 -64.54 REMARK 500 10 ILE A 136 -37.74 -37.67 REMARK 500 10 GLN A 142 179.82 -49.41 REMARK 500 10 THR A 155 160.28 -42.36 REMARK 500 10 SER A 163 122.05 -173.75 REMARK 500 10 TYR A 165 110.88 -168.65 REMARK 500 11 GLN A 70 97.46 -62.60 REMARK 500 11 ASN A 76 41.56 -99.20 REMARK 500 11 SER A 105 -62.30 -105.10 REMARK 500 11 ILE A 136 -36.57 -38.62 REMARK 500 11 GLN A 142 178.89 -50.63 REMARK 500 11 PRO A 174 -171.68 -69.75 REMARK 500 12 LYS A 71 170.59 -51.05 REMARK 500 12 THR A 74 78.70 -119.17 REMARK 500 12 SER A 105 -62.72 -107.61 REMARK 500 12 ILE A 136 -33.46 -39.20 REMARK 500 12 GLN A 142 173.22 -49.33 REMARK 500 12 ARG A 156 119.92 -174.28 REMARK 500 12 TYR A 165 -177.99 -69.29 REMARK 500 12 GLU A 166 135.77 -174.67 REMARK 500 13 LYS A 72 44.86 -87.16 REMARK 500 13 ASP A 84 38.92 72.43 REMARK 500 13 SER A 105 -65.10 -104.02 REMARK 500 13 SER A 118 108.30 -50.38 REMARK 500 13 GLN A 148 173.37 -59.68 REMARK 500 13 TRP A 153 104.50 -54.77 REMARK 500 13 THR A 164 139.31 -171.35 REMARK 500 13 TYR A 165 119.13 -169.52 REMARK 500 13 SER A 175 51.01 72.05 REMARK 500 14 SER A 75 -60.53 -97.98 REMARK 500 14 ASN A 76 41.46 -104.68 REMARK 500 14 ASP A 131 -39.91 -35.91 REMARK 500 14 ILE A 136 -30.41 -38.92 REMARK 500 14 ALA A 160 150.88 -49.27 REMARK 500 14 GLU A 166 99.87 -57.56 REMARK 500 14 SER A 175 39.75 35.19 REMARK 500 15 ASP A 73 155.87 -45.81 REMARK 500 15 THR A 115 -34.28 -131.14 REMARK 500 15 ILE A 136 -36.76 -37.01 REMARK 500 15 SER A 167 131.37 -171.78 REMARK 500 15 SER A 176 106.89 -165.72 REMARK 500 16 LYS A 71 53.68 -91.00 REMARK 500 16 SER A 105 -62.94 -107.33 REMARK 500 16 SER A 118 111.76 -37.70 REMARK 500 16 ILE A 136 -35.50 -38.73 REMARK 500 16 THR A 155 41.42 34.95 REMARK 500 16 ALA A 160 161.65 -46.07 REMARK 500 16 GLU A 166 147.05 -172.05 REMARK 500 16 THR A 169 141.52 -172.88 REMARK 500 16 LYS A 170 136.12 -170.68 REMARK 500 16 SER A 175 137.37 -36.71 REMARK 500 17 ILE A 136 -35.82 -38.17 REMARK 500 17 GLN A 142 -179.92 -56.55 REMARK 500 17 PRO A 159 -172.09 -69.72 REMARK 500 17 LYS A 162 147.78 -174.95 REMARK 500 17 SER A 175 124.06 -173.92 REMARK 500 18 SER A 64 98.66 -64.84 REMARK 500 18 SER A 68 115.54 -166.47 REMARK 500 18 ILE A 136 -36.37 -38.44 REMARK 500 18 ARG A 156 50.17 -116.50 REMARK 500 18 PRO A 159 -174.45 -69.82 REMARK 500 18 TYR A 165 157.91 -39.15 REMARK 500 18 PRO A 174 97.55 -69.81 REMARK 500 19 THR A 74 43.06 -106.37 REMARK 500 19 ASN A 76 46.56 -105.55 REMARK 500 19 PRO A 174 95.66 -69.73 REMARK 500 19 SER A 175 166.60 -43.09 REMARK 500 19 SER A 176 -54.61 -121.22 REMARK 500 20 ASN A 76 42.02 -108.33 REMARK 500 20 ILE A 136 -37.35 -39.83 REMARK 500 20 GLN A 142 -177.94 -67.69 REMARK 500 20 THR A 164 136.60 -39.75 REMARK 500 20 PRO A 174 97.35 -69.80 REMARK 500 20 SER A 176 -61.02 -125.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMT008000372.1 RELATED DB: TARGETDB DBREF 2DGO A 70 171 UNP P52912 TIA1_MOUSE 105 199 SEQADV 2DGO GLY A 63 UNP P52912 CLONING ARTIFACT SEQADV 2DGO SER A 64 UNP P52912 CLONING ARTIFACT SEQADV 2DGO SER A 65 UNP P52912 CLONING ARTIFACT SEQADV 2DGO GLY A 66 UNP P52912 CLONING ARTIFACT SEQADV 2DGO SER A 67 UNP P52912 CLONING ARTIFACT SEQADV 2DGO SER A 68 UNP P52912 CLONING ARTIFACT SEQADV 2DGO GLY A 69 UNP P52912 CLONING ARTIFACT SEQADV 2DGO SER A 172 UNP P52912 CLONING ARTIFACT SEQADV 2DGO GLY A 173 UNP P52912 CLONING ARTIFACT SEQADV 2DGO PRO A 174 UNP P52912 CLONING ARTIFACT SEQADV 2DGO SER A 175 UNP P52912 CLONING ARTIFACT SEQADV 2DGO SER A 176 UNP P52912 CLONING ARTIFACT SEQADV 2DGO GLY A 177 UNP P52912 CLONING ARTIFACT SEQRES 1 A 115 GLY SER SER GLY SER SER GLY GLN LYS LYS ASP THR SER SEQRES 2 A 115 ASN HIS PHE HIS VAL PHE VAL GLY ASP LEU SER PRO GLU SEQRES 3 A 115 ILE THR THR GLU ASP ILE LYS ALA ALA PHE ALA PRO PHE SEQRES 4 A 115 GLY ARG ILE SER ASP ALA ARG VAL VAL LYS ASP MET ALA SEQRES 5 A 115 THR GLY LYS SER LYS GLY TYR GLY PHE VAL SER PHE PHE SEQRES 6 A 115 ASN LYS TRP ASP ALA GLU ASN ALA ILE GLN GLN MET GLY SEQRES 7 A 115 GLY GLN TRP LEU GLY GLY ARG GLN ILE ARG THR ASN TRP SEQRES 8 A 115 ALA THR ARG LYS PRO PRO ALA PRO LYS SER THR TYR GLU SEQRES 9 A 115 SER ASN THR LYS GLN SER GLY PRO SER SER GLY HELIX 1 1 THR A 90 ALA A 99 1 10 HELIX 2 2 PRO A 100 GLY A 102 5 3 HELIX 3 3 ASN A 128 MET A 139 1 12 SHEET 1 A 4 ILE A 104 LYS A 111 0 SHEET 2 A 4 SER A 118 PHE A 126 -1 O SER A 125 N ASP A 106 SHEET 3 A 4 PHE A 78 GLY A 83 -1 N VAL A 82 O GLY A 122 SHEET 4 A 4 ARG A 150 TRP A 153 -1 O ASN A 152 N PHE A 81 SHEET 1 B 2 TRP A 143 LEU A 144 0 SHEET 2 B 2 ARG A 147 GLN A 148 -1 O ARG A 147 N LEU A 144 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 198 0 0 3 6 0 0 6 0 0 0 9 END