HEADER ISOMERASE 03-MAR-06 2DFU TITLE CRYSTAL STRUCTURE OF THE 2-HYDROXYHEPTA-2,4-DIENE-1,7-DIOATE ISOMERASE TITLE 2 FROM THERMUS THERMOPHILUS HB8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE 2-HYDROXYHEPTA-2,4-DIENE-1,7-DIOATE ISOMERASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 5.3.3.10; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET11A KEYWDS 2-HYDROXYHEPTA-2,4-DIENE-1,7-DIOATE ISOMERASE, STRUCTURAL GENOMICS, KEYWDS 2 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.MIZUTANI,N.KUNISHIMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 3 13-JUL-11 2DFU 1 VERSN REVDAT 2 24-FEB-09 2DFU 1 VERSN REVDAT 1 03-SEP-06 2DFU 0 JRNL AUTH H.MIZUTANI,N.KUNISHIMA JRNL TITL CRYSTAL STRUCTURE OF THE 2-HYDROXYHEPTA-2,4-DIENE-1,7-DIOATE JRNL TITL 2 ISOMERASE FROM THERMUS THERMOPHILUS HB8 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1853439.850 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 78392 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3956 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.34 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 12329 REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE : 0.2640 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 635 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7795 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 643 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.36000 REMARK 3 B22 (A**2) : 5.54000 REMARK 3 B33 (A**2) : -4.18000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 4.45000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.25 REMARK 3 ESD FROM SIGMAA (A) : 0.22 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.25 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.40 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.92 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.320 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.130 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.070 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.120 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.33 REMARK 3 BSOL : 41.02 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DFU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-MAR-06. REMARK 100 THE RCSB ID CODE IS RCSB025367. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-OCT-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : BENDING MAGNET REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS V REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78745 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : 0.07500 REMARK 200 FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.33400 REMARK 200 R SYM FOR SHELL (I) : 0.29000 REMARK 200 FOR SHELL : 4.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1WZO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM CHLORIDE, LITHIUM SULFATE, REMARK 280 SODIUM CITRATE, PH 5.4, MICROBATCH, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.70600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMMER. THERE ARE TWO DIMMERS REMARK 300 IN THE ASYMMETRIC UNIT,WHICH IS CHAIN A & B AND CHAIN C & D, REMARK 300 RESPECTIVELY. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 59 REMARK 465 HIS A 60 REMARK 465 ILE A 61 REMARK 465 ARG A 62 REMARK 465 GLU A 63 REMARK 465 MET A 64 REMARK 465 GLY A 65 REMARK 465 HIS A 66 REMARK 465 ASP A 67 REMARK 465 PHE A 68 REMARK 465 GLY A 69 REMARK 465 GLU A 70 REMARK 465 ASP A 71 REMARK 465 ARG B 58 REMARK 465 GLU B 59 REMARK 465 HIS B 60 REMARK 465 ILE B 61 REMARK 465 ARG B 62 REMARK 465 GLU B 63 REMARK 465 MET B 64 REMARK 465 GLY B 65 REMARK 465 HIS B 66 REMARK 465 ASP B 67 REMARK 465 PHE B 68 REMARK 465 GLY B 69 REMARK 465 GLU B 70 REMARK 465 ASP B 71 REMARK 465 LEU B 72 REMARK 465 ARG C 58 REMARK 465 GLU C 59 REMARK 465 HIS C 60 REMARK 465 ILE C 61 REMARK 465 ARG C 62 REMARK 465 GLU C 63 REMARK 465 MET C 64 REMARK 465 GLY C 65 REMARK 465 HIS C 66 REMARK 465 ASP C 67 REMARK 465 PHE C 68 REMARK 465 GLY C 69 REMARK 465 GLU C 70 REMARK 465 ASP C 71 REMARK 465 LEU C 72 REMARK 465 ARG D 58 REMARK 465 GLU D 59 REMARK 465 HIS D 60 REMARK 465 ILE D 61 REMARK 465 ARG D 62 REMARK 465 GLU D 63 REMARK 465 MET D 64 REMARK 465 GLY D 65 REMARK 465 HIS D 66 REMARK 465 ASP D 67 REMARK 465 PHE D 68 REMARK 465 GLY D 69 REMARK 465 GLU D 70 REMARK 465 ASP D 71 REMARK 465 LEU D 72 REMARK 465 PRO D 73 REMARK 465 LYS D 74 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP A 173 NE1 TRP A 173 CE2 0.112 REMARK 500 TRP A 264 NE1 TRP A 264 CE2 0.108 REMARK 500 TRP D 173 NE1 TRP D 173 CE2 0.110 REMARK 500 TRP D 264 NE1 TRP D 264 CE2 0.113 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 95 C - N - CA ANGL. DEV. = 9.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 7 -126.93 48.18 REMARK 500 PRO A 44 40.93 -73.35 REMARK 500 ASN A 56 4.32 -150.92 REMARK 500 ASP A 94 68.51 -168.98 REMARK 500 PRO A 95 -71.81 -43.60 REMARK 500 GLU A 109 18.94 -141.07 REMARK 500 TRP A 158 37.85 -76.93 REMARK 500 PHE A 216 -18.55 -141.42 REMARK 500 ARG A 262 128.04 -36.72 REMARK 500 ASN B 7 -128.47 47.11 REMARK 500 PRO B 44 48.20 -76.69 REMARK 500 ASP B 94 67.63 -165.04 REMARK 500 PRO B 95 -72.35 -43.22 REMARK 500 TRP B 158 30.81 -75.23 REMARK 500 PRO B 230 -167.67 -70.44 REMARK 500 ASN C 7 -121.05 46.98 REMARK 500 GLU C 8 46.99 -80.76 REMARK 500 ASN C 56 6.98 -152.86 REMARK 500 ASP C 94 70.08 -164.27 REMARK 500 TRP C 158 38.96 -81.53 REMARK 500 GLU C 196 98.85 -168.04 REMARK 500 ASN D 7 -125.66 47.06 REMARK 500 PRO D 44 48.05 -77.08 REMARK 500 ARG D 55 87.86 55.11 REMARK 500 ASP D 94 63.93 -169.40 REMARK 500 TRP D 158 34.64 -74.15 REMARK 500 LYS D 166 15.64 59.78 REMARK 500 PHE D 216 -17.53 -140.46 REMARK 500 VAL D 233 98.84 -58.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 332 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH A 356 DISTANCE = 5.14 ANGSTROMS REMARK 525 HOH B 321 DISTANCE = 5.31 ANGSTROMS REMARK 525 HOH B 384 DISTANCE = 5.54 ANGSTROMS REMARK 525 HOH C 318 DISTANCE = 5.09 ANGSTROMS REMARK 525 HOH C 325 DISTANCE = 5.22 ANGSTROMS REMARK 525 HOH C 359 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH C 364 DISTANCE = 5.50 ANGSTROMS REMARK 525 HOH D 317 DISTANCE = 5.03 ANGSTROMS REMARK 525 HOH D 331 DISTANCE = 5.25 ANGSTROMS REMARK 525 HOH D 377 DISTANCE = 5.12 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: TTK003000360.1 RELATED DB: TARGETDB DBREF 2DFU A 1 264 UNP Q5SK43 Q5SK43_THET8 1 264 DBREF 2DFU B 1 264 UNP Q5SK43 Q5SK43_THET8 1 264 DBREF 2DFU C 1 264 UNP Q5SK43 Q5SK43_THET8 1 264 DBREF 2DFU D 1 264 UNP Q5SK43 Q5SK43_THET8 1 264 SEQRES 1 A 264 MET LYS ILE LEU ARG PHE ASN GLU GLY ARG TRP GLY VAL SEQRES 2 A 264 LEU GLU GLY GLU LEU VAL LEU GLU THR ASP GLY PRO GLY SEQRES 3 A 264 GLY ASN PRO THR GLY ARG ARG TYR ASP LEU ALA SER VAL SEQRES 4 A 264 THR LEU LEU PRO PRO ALA THR PRO THR LYS ILE VAL CYS SEQRES 5 A 264 VAL GLY ARG ASN TYR ARG GLU HIS ILE ARG GLU MET GLY SEQRES 6 A 264 HIS ASP PHE GLY GLU ASP LEU PRO LYS GLU PRO GLY LEU SEQRES 7 A 264 PHE LEU LYS GLY PRO ASN ALA LEU ALA ARG PRO GLY ASN SEQRES 8 A 264 PRO ARG ASP PRO TRP GLY THR ALA GLU PRO VAL PRO TYR SEQRES 9 A 264 PRO PHE PHE THR GLU GLU LEU HIS TYR GLU GLY GLU LEU SEQRES 10 A 264 ALA VAL VAL VAL GLY ASP ARG MET ARG HIS VAL PRO PRO SEQRES 11 A 264 GLU LYS ALA LEU ASP HIS VAL LEU GLY TYR THR VAL ALA SEQRES 12 A 264 VAL ASP ILE THR ALA ARG ASP VAL GLN LYS LYS ASP LEU SEQRES 13 A 264 GLN TRP VAL ARG ALA LYS SER ALA ASP LYS PHE LEU PRO SEQRES 14 A 264 LEU GLY PRO TRP LEU GLU THR ASP LEU ASN PRO GLN ASP SEQRES 15 A 264 THR TRP VAL ARG THR TYR VAL ASN GLY THR LEU ARG GLN SEQRES 16 A 264 GLU GLY HIS THR SER GLN MET ILE PHE SER VAL ALA GLU SEQRES 17 A 264 ILE LEU SER TYR ILE SER THR PHE MET THR LEU GLU PRO SEQRES 18 A 264 LEU ASP VAL VAL LEU THR GLY THR PRO GLU GLY VAL GLY SEQRES 19 A 264 ALA LEU ARG PRO GLY ASP ARG LEU GLU VAL ALA VAL GLU SEQRES 20 A 264 GLY VAL GLY THR LEU PHE THR LEU ILE GLY PRO LYS GLU SEQRES 21 A 264 GLU ARG PRO TRP SEQRES 1 B 264 MET LYS ILE LEU ARG PHE ASN GLU GLY ARG TRP GLY VAL SEQRES 2 B 264 LEU GLU GLY GLU LEU VAL LEU GLU THR ASP GLY PRO GLY SEQRES 3 B 264 GLY ASN PRO THR GLY ARG ARG TYR ASP LEU ALA SER VAL SEQRES 4 B 264 THR LEU LEU PRO PRO ALA THR PRO THR LYS ILE VAL CYS SEQRES 5 B 264 VAL GLY ARG ASN TYR ARG GLU HIS ILE ARG GLU MET GLY SEQRES 6 B 264 HIS ASP PHE GLY GLU ASP LEU PRO LYS GLU PRO GLY LEU SEQRES 7 B 264 PHE LEU LYS GLY PRO ASN ALA LEU ALA ARG PRO GLY ASN SEQRES 8 B 264 PRO ARG ASP PRO TRP GLY THR ALA GLU PRO VAL PRO TYR SEQRES 9 B 264 PRO PHE PHE THR GLU GLU LEU HIS TYR GLU GLY GLU LEU SEQRES 10 B 264 ALA VAL VAL VAL GLY ASP ARG MET ARG HIS VAL PRO PRO SEQRES 11 B 264 GLU LYS ALA LEU ASP HIS VAL LEU GLY TYR THR VAL ALA SEQRES 12 B 264 VAL ASP ILE THR ALA ARG ASP VAL GLN LYS LYS ASP LEU SEQRES 13 B 264 GLN TRP VAL ARG ALA LYS SER ALA ASP LYS PHE LEU PRO SEQRES 14 B 264 LEU GLY PRO TRP LEU GLU THR ASP LEU ASN PRO GLN ASP SEQRES 15 B 264 THR TRP VAL ARG THR TYR VAL ASN GLY THR LEU ARG GLN SEQRES 16 B 264 GLU GLY HIS THR SER GLN MET ILE PHE SER VAL ALA GLU SEQRES 17 B 264 ILE LEU SER TYR ILE SER THR PHE MET THR LEU GLU PRO SEQRES 18 B 264 LEU ASP VAL VAL LEU THR GLY THR PRO GLU GLY VAL GLY SEQRES 19 B 264 ALA LEU ARG PRO GLY ASP ARG LEU GLU VAL ALA VAL GLU SEQRES 20 B 264 GLY VAL GLY THR LEU PHE THR LEU ILE GLY PRO LYS GLU SEQRES 21 B 264 GLU ARG PRO TRP SEQRES 1 C 264 MET LYS ILE LEU ARG PHE ASN GLU GLY ARG TRP GLY VAL SEQRES 2 C 264 LEU GLU GLY GLU LEU VAL LEU GLU THR ASP GLY PRO GLY SEQRES 3 C 264 GLY ASN PRO THR GLY ARG ARG TYR ASP LEU ALA SER VAL SEQRES 4 C 264 THR LEU LEU PRO PRO ALA THR PRO THR LYS ILE VAL CYS SEQRES 5 C 264 VAL GLY ARG ASN TYR ARG GLU HIS ILE ARG GLU MET GLY SEQRES 6 C 264 HIS ASP PHE GLY GLU ASP LEU PRO LYS GLU PRO GLY LEU SEQRES 7 C 264 PHE LEU LYS GLY PRO ASN ALA LEU ALA ARG PRO GLY ASN SEQRES 8 C 264 PRO ARG ASP PRO TRP GLY THR ALA GLU PRO VAL PRO TYR SEQRES 9 C 264 PRO PHE PHE THR GLU GLU LEU HIS TYR GLU GLY GLU LEU SEQRES 10 C 264 ALA VAL VAL VAL GLY ASP ARG MET ARG HIS VAL PRO PRO SEQRES 11 C 264 GLU LYS ALA LEU ASP HIS VAL LEU GLY TYR THR VAL ALA SEQRES 12 C 264 VAL ASP ILE THR ALA ARG ASP VAL GLN LYS LYS ASP LEU SEQRES 13 C 264 GLN TRP VAL ARG ALA LYS SER ALA ASP LYS PHE LEU PRO SEQRES 14 C 264 LEU GLY PRO TRP LEU GLU THR ASP LEU ASN PRO GLN ASP SEQRES 15 C 264 THR TRP VAL ARG THR TYR VAL ASN GLY THR LEU ARG GLN SEQRES 16 C 264 GLU GLY HIS THR SER GLN MET ILE PHE SER VAL ALA GLU SEQRES 17 C 264 ILE LEU SER TYR ILE SER THR PHE MET THR LEU GLU PRO SEQRES 18 C 264 LEU ASP VAL VAL LEU THR GLY THR PRO GLU GLY VAL GLY SEQRES 19 C 264 ALA LEU ARG PRO GLY ASP ARG LEU GLU VAL ALA VAL GLU SEQRES 20 C 264 GLY VAL GLY THR LEU PHE THR LEU ILE GLY PRO LYS GLU SEQRES 21 C 264 GLU ARG PRO TRP SEQRES 1 D 264 MET LYS ILE LEU ARG PHE ASN GLU GLY ARG TRP GLY VAL SEQRES 2 D 264 LEU GLU GLY GLU LEU VAL LEU GLU THR ASP GLY PRO GLY SEQRES 3 D 264 GLY ASN PRO THR GLY ARG ARG TYR ASP LEU ALA SER VAL SEQRES 4 D 264 THR LEU LEU PRO PRO ALA THR PRO THR LYS ILE VAL CYS SEQRES 5 D 264 VAL GLY ARG ASN TYR ARG GLU HIS ILE ARG GLU MET GLY SEQRES 6 D 264 HIS ASP PHE GLY GLU ASP LEU PRO LYS GLU PRO GLY LEU SEQRES 7 D 264 PHE LEU LYS GLY PRO ASN ALA LEU ALA ARG PRO GLY ASN SEQRES 8 D 264 PRO ARG ASP PRO TRP GLY THR ALA GLU PRO VAL PRO TYR SEQRES 9 D 264 PRO PHE PHE THR GLU GLU LEU HIS TYR GLU GLY GLU LEU SEQRES 10 D 264 ALA VAL VAL VAL GLY ASP ARG MET ARG HIS VAL PRO PRO SEQRES 11 D 264 GLU LYS ALA LEU ASP HIS VAL LEU GLY TYR THR VAL ALA SEQRES 12 D 264 VAL ASP ILE THR ALA ARG ASP VAL GLN LYS LYS ASP LEU SEQRES 13 D 264 GLN TRP VAL ARG ALA LYS SER ALA ASP LYS PHE LEU PRO SEQRES 14 D 264 LEU GLY PRO TRP LEU GLU THR ASP LEU ASN PRO GLN ASP SEQRES 15 D 264 THR TRP VAL ARG THR TYR VAL ASN GLY THR LEU ARG GLN SEQRES 16 D 264 GLU GLY HIS THR SER GLN MET ILE PHE SER VAL ALA GLU SEQRES 17 D 264 ILE LEU SER TYR ILE SER THR PHE MET THR LEU GLU PRO SEQRES 18 D 264 LEU ASP VAL VAL LEU THR GLY THR PRO GLU GLY VAL GLY SEQRES 19 D 264 ALA LEU ARG PRO GLY ASP ARG LEU GLU VAL ALA VAL GLU SEQRES 20 D 264 GLY VAL GLY THR LEU PHE THR LEU ILE GLY PRO LYS GLU SEQRES 21 D 264 GLU ARG PRO TRP FORMUL 5 HOH *643(H2 O) HELIX 1 1 ALA A 37 VAL A 39 5 3 HELIX 2 2 GLY A 82 ASN A 84 5 3 HELIX 3 3 ASP A 94 ALA A 99 1 6 HELIX 4 4 PRO A 129 LEU A 134 1 6 HELIX 5 5 ARG A 149 ASP A 155 1 7 HELIX 6 6 TRP A 158 SER A 163 1 6 HELIX 7 7 SER A 200 MET A 202 5 3 HELIX 8 8 SER A 205 THR A 215 1 11 HELIX 9 9 ALA B 37 VAL B 39 5 3 HELIX 10 10 GLY B 82 ASN B 84 5 3 HELIX 11 11 ASP B 94 ALA B 99 1 6 HELIX 12 12 PRO B 129 LEU B 134 1 6 HELIX 13 13 ARG B 149 ASP B 155 1 7 HELIX 14 14 TRP B 158 SER B 163 1 6 HELIX 15 15 SER B 200 MET B 202 5 3 HELIX 16 16 SER B 205 THR B 215 1 11 HELIX 17 17 ALA C 37 VAL C 39 5 3 HELIX 18 18 GLY C 82 ASN C 84 5 3 HELIX 19 19 ASP C 94 ALA C 99 1 6 HELIX 20 20 PRO C 129 LEU C 134 1 6 HELIX 21 21 ASP C 150 ASP C 155 1 6 HELIX 22 22 TRP C 158 SER C 163 1 6 HELIX 23 23 SER C 200 MET C 202 5 3 HELIX 24 24 SER C 205 MET C 217 1 13 HELIX 25 25 ALA D 37 VAL D 39 5 3 HELIX 26 26 GLY D 82 ASN D 84 5 3 HELIX 27 27 PRO D 129 LEU D 134 1 6 HELIX 28 28 ARG D 149 ASP D 155 1 7 HELIX 29 29 TRP D 158 SER D 163 1 6 HELIX 30 30 SER D 200 MET D 202 5 3 HELIX 31 31 SER D 205 THR D 215 1 11 SHEET 1 A10 PRO A 29 ASP A 35 0 SHEET 2 A10 LEU A 18 THR A 22 -1 N VAL A 19 O TYR A 34 SHEET 3 A10 ARG A 10 GLU A 15 -1 N VAL A 13 O LEU A 20 SHEET 4 A10 LYS A 2 PHE A 6 -1 N LEU A 4 O GLY A 12 SHEET 5 A10 LEU A 168 GLU A 175 -1 O LEU A 174 N ILE A 3 SHEET 6 A10 VAL A 137 VAL A 144 -1 N TYR A 140 O GLU A 175 SHEET 7 A10 GLY A 115 VAL A 121 -1 N ALA A 118 O THR A 141 SHEET 8 A10 VAL A 224 LEU A 226 -1 O VAL A 225 N VAL A 119 SHEET 9 A10 ILE A 50 VAL A 53 1 N VAL A 51 O LEU A 226 SHEET 10 A10 LEU A 78 LYS A 81 -1 O PHE A 79 N CYS A 52 SHEET 1 B 4 LEU A 41 LEU A 42 0 SHEET 2 B 4 LYS A 2 PHE A 6 -1 N ARG A 5 O LEU A 42 SHEET 3 B 4 LEU A 168 GLU A 175 -1 O LEU A 174 N ILE A 3 SHEET 4 B 4 LEU A 86 ALA A 87 1 N ALA A 87 O LEU A 170 SHEET 1 C 5 VAL A 102 TYR A 104 0 SHEET 2 C 5 GLY A 250 LYS A 259 1 O GLY A 257 N VAL A 102 SHEET 3 C 5 ARG A 241 VAL A 246 -1 N LEU A 242 O THR A 254 SHEET 4 C 5 TRP A 184 VAL A 189 -1 N ARG A 186 O ALA A 245 SHEET 5 C 5 THR A 192 HIS A 198 -1 O ARG A 194 N THR A 187 SHEET 1 D 2 LEU A 111 HIS A 112 0 SHEET 2 D 2 THR A 147 ALA A 148 -1 O THR A 147 N HIS A 112 SHEET 1 E10 PRO B 29 ASP B 35 0 SHEET 2 E10 LEU B 18 THR B 22 -1 N VAL B 19 O TYR B 34 SHEET 3 E10 ARG B 10 GLU B 15 -1 N GLU B 15 O LEU B 18 SHEET 4 E10 LYS B 2 PHE B 6 -1 N PHE B 6 O ARG B 10 SHEET 5 E10 LEU B 168 GLU B 175 -1 O LEU B 174 N ILE B 3 SHEET 6 E10 VAL B 137 VAL B 144 -1 N TYR B 140 O GLU B 175 SHEET 7 E10 GLY B 115 VAL B 121 -1 N ALA B 118 O THR B 141 SHEET 8 E10 VAL B 224 LEU B 226 -1 O VAL B 225 N VAL B 119 SHEET 9 E10 ILE B 50 VAL B 53 1 N VAL B 51 O LEU B 226 SHEET 10 E10 LEU B 78 LYS B 81 -1 O PHE B 79 N CYS B 52 SHEET 1 F 4 LEU B 41 LEU B 42 0 SHEET 2 F 4 LYS B 2 PHE B 6 -1 N ARG B 5 O LEU B 42 SHEET 3 F 4 LEU B 168 GLU B 175 -1 O LEU B 174 N ILE B 3 SHEET 4 F 4 LEU B 86 ALA B 87 1 N ALA B 87 O LEU B 170 SHEET 1 G 5 VAL B 102 TYR B 104 0 SHEET 2 G 5 GLY B 250 LYS B 259 1 O LEU B 255 N VAL B 102 SHEET 3 G 5 ARG B 241 VAL B 246 -1 N LEU B 242 O THR B 254 SHEET 4 G 5 TRP B 184 VAL B 189 -1 N TYR B 188 O GLU B 243 SHEET 5 G 5 THR B 192 HIS B 198 -1 O THR B 192 N VAL B 189 SHEET 1 H 2 LEU B 111 HIS B 112 0 SHEET 2 H 2 THR B 147 ALA B 148 -1 O THR B 147 N HIS B 112 SHEET 1 I10 PRO C 29 ASP C 35 0 SHEET 2 I10 LEU C 18 THR C 22 -1 N VAL C 19 O TYR C 34 SHEET 3 I10 ARG C 10 GLU C 15 -1 N VAL C 13 O LEU C 20 SHEET 4 I10 LYS C 2 PHE C 6 -1 N PHE C 6 O ARG C 10 SHEET 5 I10 LEU C 168 GLU C 175 -1 O LEU C 174 N ILE C 3 SHEET 6 I10 VAL C 137 VAL C 144 -1 N TYR C 140 O GLU C 175 SHEET 7 I10 GLY C 115 VAL C 121 -1 N VAL C 120 O GLY C 139 SHEET 8 I10 VAL C 224 LEU C 226 -1 O VAL C 225 N VAL C 119 SHEET 9 I10 ILE C 50 VAL C 53 1 N VAL C 51 O LEU C 226 SHEET 10 I10 LEU C 78 LYS C 81 -1 O PHE C 79 N CYS C 52 SHEET 1 J 4 LEU C 41 LEU C 42 0 SHEET 2 J 4 LYS C 2 PHE C 6 -1 N ARG C 5 O LEU C 42 SHEET 3 J 4 LEU C 168 GLU C 175 -1 O LEU C 174 N ILE C 3 SHEET 4 J 4 LEU C 86 ALA C 87 1 N ALA C 87 O LEU C 170 SHEET 1 K 5 VAL C 102 TYR C 104 0 SHEET 2 K 5 GLY C 250 LYS C 259 1 O LEU C 255 N VAL C 102 SHEET 3 K 5 ARG C 241 VAL C 246 -1 N LEU C 242 O THR C 254 SHEET 4 K 5 TRP C 184 VAL C 189 -1 N TYR C 188 O GLU C 243 SHEET 5 K 5 THR C 192 HIS C 198 -1 O ARG C 194 N THR C 187 SHEET 1 L 3 THR C 147 ALA C 148 0 SHEET 2 L 3 LEU C 111 TYR C 113 -1 N HIS C 112 O THR C 147 SHEET 3 L 3 GLY C 234 ALA C 235 -1 O GLY C 234 N TYR C 113 SHEET 1 M10 PRO D 29 ASP D 35 0 SHEET 2 M10 LEU D 18 THR D 22 -1 N VAL D 19 O TYR D 34 SHEET 3 M10 ARG D 10 GLU D 15 -1 N GLU D 15 O LEU D 18 SHEET 4 M10 LYS D 2 PHE D 6 -1 N PHE D 6 O ARG D 10 SHEET 5 M10 LEU D 168 GLU D 175 -1 O LEU D 174 N ILE D 3 SHEET 6 M10 VAL D 137 VAL D 144 -1 N TYR D 140 O GLU D 175 SHEET 7 M10 GLY D 115 VAL D 121 -1 N ALA D 118 O THR D 141 SHEET 8 M10 VAL D 224 LEU D 226 -1 O VAL D 225 N VAL D 119 SHEET 9 M10 ILE D 50 GLY D 54 1 N VAL D 51 O VAL D 224 SHEET 10 M10 GLY D 77 LYS D 81 -1 O PHE D 79 N CYS D 52 SHEET 1 N 4 LEU D 41 LEU D 42 0 SHEET 2 N 4 LYS D 2 PHE D 6 -1 N ARG D 5 O LEU D 42 SHEET 3 N 4 LEU D 168 GLU D 175 -1 O LEU D 174 N ILE D 3 SHEET 4 N 4 LEU D 86 ALA D 87 1 N ALA D 87 O LEU D 170 SHEET 1 O 5 VAL D 102 TYR D 104 0 SHEET 2 O 5 GLY D 250 LYS D 259 1 O LEU D 255 N VAL D 102 SHEET 3 O 5 ARG D 241 VAL D 246 -1 N VAL D 244 O LEU D 252 SHEET 4 O 5 TRP D 184 VAL D 189 -1 N TYR D 188 O GLU D 243 SHEET 5 O 5 THR D 192 HIS D 198 -1 O ARG D 194 N THR D 187 SHEET 1 P 2 LEU D 111 HIS D 112 0 SHEET 2 P 2 THR D 147 ALA D 148 -1 O THR D 147 N HIS D 112 CISPEP 1 GLY A 171 PRO A 172 0 -0.06 CISPEP 2 GLY B 171 PRO B 172 0 0.14 CISPEP 3 GLY C 171 PRO C 172 0 0.23 CISPEP 4 GLY D 171 PRO D 172 0 0.44 CRYST1 93.340 73.412 122.632 90.00 111.78 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010714 0.000000 0.004282 0.00000 SCALE2 0.000000 0.013622 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008782 0.00000 MASTER 404 0 0 31 85 0 0 6 0 0 0 84 END