HEADER METAL BINDING PROTEIN 27-MAY-05 2CUR TITLE SOLUTION STRUCTURE OF SKELETAL MUSCLE LIM-PROTEIN 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SKELETAL MUSCLE LIM-PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: LIM DOMAIN; COMPND 5 SYNONYM: SLIM 1, SLIM, FOUR AND A HALF LIM DOMAINS PROTEIN COMPND 6 1, FHL-1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FHL1; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040816-02; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS LIM, FOUR AND A HALF LIM DOMAINS PROTEIN 1, STRUCTURAL KEYWDS 2 GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL KEYWDS 3 AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 4 GENOMICS/PROTEOMICS INITIATIVE, RSGI, METAL BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.N.NIRAULA,T.TOMIZAWA,S.KOSHIBA,M.INOUE,T.KIGAWA, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 3 (RSGI) REVDAT 2 24-FEB-09 2CUR 1 VERSN REVDAT 1 27-NOV-05 2CUR 0 JRNL AUTH T.N.NIRAULA,T.TOMIZAWA,S.KOSHIBA,M.INOUE,T.KIGAWA, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF SKELETAL MUSCLE LIM-PROTEIN 1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CUR COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB024642. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.70MM LIM DOMAIN U-13C 15N; REMARK 210 20MM D-TRIS-HCL(PH 7.0); 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; REMARK 210 0.01MM ZNCL2; 90% H2O; 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, NMRPIPE REMARK 210 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.913, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 CYS A 8 -178.94 -58.21 REMARK 500 1 LYS A 10 -75.88 -78.72 REMARK 500 1 THR A 16 -179.67 -64.53 REMARK 500 1 SER A 17 37.09 -83.28 REMARK 500 1 PHE A 32 30.11 -85.40 REMARK 500 1 VAL A 35 35.53 -84.17 REMARK 500 1 THR A 36 -76.04 -132.30 REMARK 500 1 LYS A 40 99.99 -66.87 REMARK 500 1 ASP A 51 -72.23 -70.77 REMARK 500 2 SER A 2 168.09 -48.78 REMARK 500 2 CYS A 8 -178.98 -55.34 REMARK 500 2 LYS A 10 -76.69 -81.51 REMARK 500 2 SER A 17 39.10 -82.41 REMARK 500 2 PHE A 32 39.40 -83.04 REMARK 500 2 VAL A 35 34.10 -93.09 REMARK 500 2 THR A 36 -75.03 -129.31 REMARK 500 2 ASP A 51 -73.94 -71.06 REMARK 500 2 SER A 67 106.05 -37.90 REMARK 500 3 CYS A 8 -178.16 -51.73 REMARK 500 3 LYS A 10 -75.07 -70.06 REMARK 500 3 SER A 17 39.17 -82.03 REMARK 500 3 CYS A 34 164.24 -44.71 REMARK 500 3 VAL A 35 35.61 -99.10 REMARK 500 3 THR A 36 -73.61 -131.43 REMARK 500 3 LYS A 40 81.08 -68.20 REMARK 500 3 GLU A 50 -32.76 -34.67 REMARK 500 4 CYS A 8 -178.18 -54.35 REMARK 500 4 LYS A 10 -75.98 -78.06 REMARK 500 4 THR A 16 177.23 -57.44 REMARK 500 4 SER A 17 39.15 -82.08 REMARK 500 4 VAL A 35 37.04 -95.86 REMARK 500 4 THR A 36 -72.98 -132.81 REMARK 500 4 LYS A 40 97.73 -55.05 REMARK 500 4 PRO A 66 -174.59 -69.76 REMARK 500 4 SER A 67 101.00 -48.08 REMARK 500 5 SER A 5 173.77 -54.65 REMARK 500 5 CYS A 8 -178.84 -56.24 REMARK 500 5 LYS A 10 -75.35 -83.23 REMARK 500 5 ALA A 14 153.70 -48.69 REMARK 500 5 THR A 16 177.62 -55.51 REMARK 500 5 SER A 17 39.15 -81.59 REMARK 500 5 THR A 36 -74.99 -133.00 REMARK 500 5 SER A 38 52.86 71.72 REMARK 500 5 GLU A 50 -33.64 -36.41 REMARK 500 5 ASP A 51 -74.68 -77.88 REMARK 500 6 CYS A 8 -178.52 -55.22 REMARK 500 6 LYS A 10 -75.76 -75.83 REMARK 500 6 SER A 17 39.96 -78.48 REMARK 500 6 VAL A 35 35.37 -88.81 REMARK 500 6 THR A 36 -75.93 -129.78 REMARK 500 6 ALA A 42 109.47 -47.26 REMARK 500 6 GLU A 50 -37.28 -35.16 REMARK 500 6 ASP A 51 -76.40 -86.05 REMARK 500 6 PRO A 66 3.81 -69.72 REMARK 500 7 CYS A 8 -179.00 -54.58 REMARK 500 7 LYS A 10 -75.28 -71.54 REMARK 500 7 ASN A 12 53.57 73.39 REMARK 500 7 SER A 17 39.60 -79.98 REMARK 500 7 PHE A 32 35.78 -83.14 REMARK 500 7 VAL A 35 36.57 -97.53 REMARK 500 7 THR A 36 -73.51 -133.59 REMARK 500 7 GLU A 50 -30.30 -36.90 REMARK 500 7 ASP A 51 -71.61 -79.80 REMARK 500 7 ASP A 57 -70.75 -49.79 REMARK 500 7 PRO A 66 3.35 -69.83 REMARK 500 7 SER A 67 40.72 -105.65 REMARK 500 8 SER A 6 40.03 34.36 REMARK 500 8 CYS A 8 -179.36 -52.01 REMARK 500 8 LYS A 10 -74.28 -72.73 REMARK 500 8 SER A 17 39.04 -81.64 REMARK 500 8 PHE A 32 30.34 -84.75 REMARK 500 8 VAL A 35 36.40 -94.83 REMARK 500 8 THR A 36 -75.19 -133.87 REMARK 500 8 GLU A 50 -38.80 -32.75 REMARK 500 8 SER A 68 106.73 -52.22 REMARK 500 9 CYS A 8 -178.18 -68.47 REMARK 500 9 LYS A 10 -75.51 -74.06 REMARK 500 9 SER A 17 39.32 -81.28 REMARK 500 9 VAL A 35 37.09 -92.90 REMARK 500 9 THR A 36 -70.44 -132.76 REMARK 500 9 SER A 64 173.83 -54.56 REMARK 500 9 SER A 67 121.16 -172.51 REMARK 500 10 SER A 2 41.37 -81.93 REMARK 500 10 SER A 3 42.67 -81.31 REMARK 500 10 CYS A 8 -178.15 -53.55 REMARK 500 10 LYS A 10 -75.87 -72.71 REMARK 500 10 SER A 17 39.20 -81.82 REMARK 500 10 PHE A 32 34.36 -83.94 REMARK 500 10 THR A 36 -74.76 -128.18 REMARK 500 10 GLU A 50 -43.44 -29.58 REMARK 500 10 ASP A 51 -72.57 -69.03 REMARK 500 11 CYS A 8 -178.78 -53.40 REMARK 500 11 LYS A 10 -75.80 -76.27 REMARK 500 11 SER A 17 39.12 -81.90 REMARK 500 11 VAL A 35 36.38 -95.84 REMARK 500 11 THR A 36 -72.25 -130.10 REMARK 500 11 ALA A 42 111.63 -39.55 REMARK 500 11 GLU A 50 -31.12 -36.06 REMARK 500 11 PRO A 66 85.25 -69.75 REMARK 500 12 SER A 6 176.55 -52.01 REMARK 500 12 CYS A 8 -178.74 -62.26 REMARK 500 12 LYS A 10 -75.03 -70.98 REMARK 500 12 ASN A 12 50.17 74.37 REMARK 500 12 THR A 16 175.42 -46.98 REMARK 500 12 SER A 17 39.64 -79.48 REMARK 500 12 PHE A 32 31.26 -84.16 REMARK 500 12 VAL A 35 36.36 -89.40 REMARK 500 12 THR A 36 -76.29 -133.42 REMARK 500 12 LYS A 40 96.80 -51.81 REMARK 500 12 ALA A 42 118.47 -39.45 REMARK 500 12 ASP A 51 -72.02 -63.74 REMARK 500 12 ASP A 57 -71.99 -51.25 REMARK 500 12 SER A 67 85.34 -64.99 REMARK 500 13 SER A 6 45.67 -78.50 REMARK 500 13 CYS A 8 -177.49 -60.80 REMARK 500 13 LYS A 10 -76.63 -76.17 REMARK 500 13 THR A 16 -179.73 -58.10 REMARK 500 13 SER A 17 39.06 -82.00 REMARK 500 13 PHE A 32 32.56 -85.07 REMARK 500 13 VAL A 35 36.32 -94.67 REMARK 500 13 THR A 36 -74.87 -132.25 REMARK 500 13 LYS A 40 93.60 -55.79 REMARK 500 13 GLU A 50 -34.06 -34.48 REMARK 500 13 ASP A 51 -73.62 -79.33 REMARK 500 13 PRO A 66 -179.16 -69.72 REMARK 500 13 SER A 68 -61.84 -105.23 REMARK 500 14 SER A 6 -62.28 -108.03 REMARK 500 14 CYS A 8 -178.81 -52.27 REMARK 500 14 LYS A 10 -76.18 -78.74 REMARK 500 14 SER A 17 39.88 -81.15 REMARK 500 14 PHE A 32 32.98 -84.06 REMARK 500 14 VAL A 35 34.60 -97.89 REMARK 500 14 THR A 36 -74.61 -131.29 REMARK 500 14 GLU A 50 -39.94 -32.56 REMARK 500 14 ASP A 51 -73.12 -73.40 REMARK 500 14 PRO A 66 96.53 -69.81 REMARK 500 15 SER A 6 42.09 -92.47 REMARK 500 15 CYS A 8 -178.19 -53.45 REMARK 500 15 LYS A 10 -76.02 -69.76 REMARK 500 15 THR A 16 -178.40 -51.26 REMARK 500 15 SER A 17 39.54 -76.65 REMARK 500 15 VAL A 35 36.69 -99.76 REMARK 500 15 THR A 36 -67.78 -132.79 REMARK 500 15 GLU A 50 -31.95 -34.90 REMARK 500 15 ASP A 51 -73.59 -79.57 REMARK 500 15 SER A 64 109.54 -57.63 REMARK 500 16 CYS A 8 -178.59 -53.29 REMARK 500 16 LYS A 10 -78.26 -87.38 REMARK 500 16 SER A 17 39.42 -80.37 REMARK 500 16 VAL A 35 30.61 -93.04 REMARK 500 16 THR A 36 -76.89 -128.77 REMARK 500 17 CYS A 8 -178.43 -66.70 REMARK 500 17 LYS A 10 -75.87 -72.93 REMARK 500 17 THR A 16 178.55 -56.99 REMARK 500 17 SER A 17 39.13 -81.18 REMARK 500 17 PHE A 32 33.52 -83.63 REMARK 500 17 VAL A 35 32.02 -94.18 REMARK 500 17 THR A 36 -74.78 -129.53 REMARK 500 17 PRO A 66 3.75 -69.78 REMARK 500 18 SER A 6 98.48 -61.82 REMARK 500 18 CYS A 8 -177.29 -52.27 REMARK 500 18 LYS A 10 -76.47 -74.05 REMARK 500 18 SER A 17 39.44 -81.32 REMARK 500 18 PHE A 32 36.25 -83.25 REMARK 500 18 VAL A 35 36.23 -93.98 REMARK 500 18 THR A 36 -74.97 -131.92 REMARK 500 18 ALA A 42 109.53 -48.12 REMARK 500 18 GLU A 50 -43.14 -29.32 REMARK 500 18 ASP A 51 -70.49 -65.61 REMARK 500 18 PRO A 66 94.36 -69.75 REMARK 500 19 SER A 2 166.43 -47.38 REMARK 500 19 SER A 5 120.17 -171.47 REMARK 500 19 CYS A 8 -179.41 -58.80 REMARK 500 19 LYS A 10 -74.56 -73.09 REMARK 500 19 THR A 16 172.21 -48.66 REMARK 500 19 SER A 17 40.20 -78.26 REMARK 500 19 PHE A 32 30.45 -84.81 REMARK 500 19 THR A 36 -77.30 -123.39 REMARK 500 19 LYS A 40 109.74 -48.74 REMARK 500 19 VAL A 56 -37.32 -35.39 REMARK 500 20 SER A 6 116.91 -37.75 REMARK 500 20 CYS A 8 -178.60 -52.62 REMARK 500 20 LYS A 10 -75.61 -74.32 REMARK 500 20 THR A 16 -178.33 -51.72 REMARK 500 20 SER A 17 37.73 -77.71 REMARK 500 20 PHE A 32 33.34 -83.38 REMARK 500 20 CYS A 34 171.36 -58.94 REMARK 500 20 THR A 36 -74.88 -132.63 REMARK 500 20 LYS A 40 84.58 -65.84 REMARK 500 20 ALA A 42 109.00 -46.62 REMARK 500 20 GLU A 50 -39.21 -36.13 REMARK 500 20 TYR A 59 -39.11 -38.72 REMARK 500 20 PRO A 66 88.25 -69.73 REMARK 500 20 SER A 67 112.18 -164.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 8 SG REMARK 620 2 CYS A 11 SG 89.5 REMARK 620 3 HIS A 28 ND1 115.0 104.7 REMARK 620 4 CYS A 31 SG 119.4 104.5 117.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 34 SG REMARK 620 2 CYS A 37 SG 89.3 REMARK 620 3 CYS A 55 SG 119.3 107.2 REMARK 620 4 CYS A 58 SG 119.0 109.2 109.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSS001003796.3 RELATED DB: TARGETDB DBREF 2CUR A 8 63 UNP Q13642 FHL1_HUMAN 161 216 SEQADV 2CUR GLY A 1 UNP Q13642 CLONING ARTIFACT SEQADV 2CUR SER A 2 UNP Q13642 CLONING ARTIFACT SEQADV 2CUR SER A 3 UNP Q13642 CLONING ARTIFACT SEQADV 2CUR GLY A 4 UNP Q13642 CLONING ARTIFACT SEQADV 2CUR SER A 5 UNP Q13642 CLONING ARTIFACT SEQADV 2CUR SER A 6 UNP Q13642 CLONING ARTIFACT SEQADV 2CUR GLY A 7 UNP Q13642 CLONING ARTIFACT SEQADV 2CUR SER A 64 UNP Q13642 CLONING ARTIFACT SEQADV 2CUR GLY A 65 UNP Q13642 CLONING ARTIFACT SEQADV 2CUR PRO A 66 UNP Q13642 CLONING ARTIFACT SEQADV 2CUR SER A 67 UNP Q13642 CLONING ARTIFACT SEQADV 2CUR SER A 68 UNP Q13642 CLONING ARTIFACT SEQADV 2CUR GLY A 69 UNP Q13642 CLONING ARTIFACT SEQRES 1 A 69 GLY SER SER GLY SER SER GLY CYS VAL LYS CYS ASN LYS SEQRES 2 A 69 ALA ILE THR SER GLY GLY ILE THR TYR GLN ASP GLN PRO SEQRES 3 A 69 TRP HIS ALA ASP CYS PHE VAL CYS VAL THR CYS SER LYS SEQRES 4 A 69 LYS LEU ALA GLY GLN ARG PHE THR ALA VAL GLU ASP GLN SEQRES 5 A 69 TYR TYR CYS VAL ASP CYS TYR LYS ASN PHE VAL SER GLY SEQRES 6 A 69 PRO SER SER GLY HET ZN A 201 1 HET ZN A 401 1 HETNAM ZN ZINC ION FORMUL 2 ZN 2(ZN 2+) HELIX 1 1 VAL A 56 SER A 64 1 9 SHEET 1 A 2 ILE A 20 TYR A 22 0 SHEET 2 A 2 GLN A 25 TRP A 27 -1 O TRP A 27 N ILE A 20 SHEET 1 B 2 PHE A 46 ALA A 48 0 SHEET 2 B 2 TYR A 53 CYS A 55 -1 O TYR A 54 N THR A 47 LINK ZN ZN A 201 SG CYS A 8 1555 1555 2.33 LINK ZN ZN A 201 SG CYS A 11 1555 1555 2.36 LINK ZN ZN A 201 ND1 HIS A 28 1555 1555 2.36 LINK ZN ZN A 201 SG CYS A 31 1555 1555 2.32 LINK ZN ZN A 401 SG CYS A 34 1555 1555 2.32 LINK ZN ZN A 401 SG CYS A 37 1555 1555 2.33 LINK ZN ZN A 401 SG CYS A 55 1555 1555 2.32 LINK ZN ZN A 401 SG CYS A 58 1555 1555 2.32 SITE 1 AC1 4 CYS A 8 CYS A 11 HIS A 28 CYS A 31 SITE 1 AC2 4 CYS A 34 CYS A 37 CYS A 55 CYS A 58 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 297 0 2 1 4 0 2 6 0 0 0 6 END