HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 27-MAY-05 2CUQ TITLE SOLUTION STRUCTURE OF SECOND LIM DOMAIN FROM HUMAN SKELETAL TITLE 2 MUSCLE LIM-PROTEIN 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FOUR AND A HALF LIM DOMAINS 3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: LIM DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FHL3; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040830-08; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS FOUR AND A HALF LIM DOMAINS 3, LIM DOMAIN, STRUCTURAL KEYWDS 2 GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL KEYWDS 3 AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 4 GENOMICS/PROTEOMICS INITIATIVE, RSGI, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.N.NIRAULA,K.SAITO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA, AUTHOR 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 2 24-FEB-09 2CUQ 1 VERSN REVDAT 1 27-NOV-05 2CUQ 0 JRNL AUTH T.N.NIRAULA,K.SAITO,S.KOSHIBA,M.INOUE,T.KIGAWA, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF SECOND LIM DOMAIN FROM HUMAN JRNL TITL 2 SKELETAL MUSCLE LIM-PROTEIN 2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CUQ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JUN-05. REMARK 100 THE RCSB ID CODE IS RCSB024641. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.40MM LIM DOMAIN U-13C 15N; REMARK 210 20MM D-TRIS-HCL; 100MM NACL; 1 REMARK 210 MM D-DTT; 0.02% NAN3; 0.01MM REMARK 210 ZNCL2; 90% H2O; 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, NMRPIPE REMARK 210 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.913, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 23 -75.23 -94.67 REMARK 500 1 THR A 24 146.40 -173.53 REMARK 500 1 GLN A 27 47.75 -83.03 REMARK 500 1 LEU A 42 93.58 -47.75 REMARK 500 1 ALA A 52 99.65 -44.74 REMARK 500 1 GLU A 71 -38.10 -134.97 REMARK 500 1 ALA A 74 41.02 -86.64 REMARK 500 1 SER A 75 174.82 -58.80 REMARK 500 2 ASN A 12 42.80 -85.16 REMARK 500 2 ARG A 20 -62.65 -90.90 REMARK 500 2 LYS A 23 -71.70 -100.30 REMARK 500 2 THR A 26 -61.93 -129.31 REMARK 500 2 ARG A 39 -39.31 -38.52 REMARK 500 2 LEU A 42 101.26 -50.56 REMARK 500 2 ALA A 52 104.26 -46.23 REMARK 500 2 GLU A 71 -39.66 -132.46 REMARK 500 2 SER A 75 42.59 -105.75 REMARK 500 3 SER A 2 42.57 -81.17 REMARK 500 3 TYR A 10 109.24 -48.12 REMARK 500 3 LYS A 23 -75.82 -91.90 REMARK 500 3 THR A 24 145.18 -171.63 REMARK 500 3 LEU A 42 89.40 -49.42 REMARK 500 3 ALA A 52 98.42 -45.13 REMARK 500 3 GLU A 71 -42.59 -135.01 REMARK 500 4 SER A 3 110.66 -160.90 REMARK 500 4 SER A 6 -52.55 -130.83 REMARK 500 4 LYS A 23 -75.84 -95.85 REMARK 500 4 ARG A 39 -39.86 -38.77 REMARK 500 4 LEU A 42 88.70 -52.41 REMARK 500 4 ALA A 52 97.34 -46.57 REMARK 500 4 GLU A 71 -38.25 -134.90 REMARK 500 4 PRO A 77 -174.61 -69.79 REMARK 500 5 ALA A 15 148.68 -172.78 REMARK 500 5 LYS A 23 -72.72 -102.16 REMARK 500 5 ARG A 39 -37.57 -34.47 REMARK 500 5 LEU A 42 103.63 -52.47 REMARK 500 5 ALA A 52 99.14 -47.78 REMARK 500 5 GLU A 71 -47.18 -134.30 REMARK 500 6 SER A 5 120.32 -172.87 REMARK 500 6 SER A 22 49.75 70.01 REMARK 500 6 LYS A 23 -75.86 -99.93 REMARK 500 6 LEU A 42 87.58 -48.88 REMARK 500 6 CYS A 44 158.75 -48.76 REMARK 500 6 ALA A 52 100.98 -45.85 REMARK 500 6 GLU A 71 -35.22 -135.02 REMARK 500 7 SER A 6 42.95 -80.71 REMARK 500 7 ASN A 12 146.72 -173.08 REMARK 500 7 ALA A 15 148.40 -175.00 REMARK 500 7 SER A 22 44.75 72.09 REMARK 500 7 LYS A 23 -75.22 -94.18 REMARK 500 7 THR A 24 148.16 -174.35 REMARK 500 7 ARG A 39 -35.44 -35.55 REMARK 500 7 LEU A 42 96.85 -51.14 REMARK 500 7 CYS A 44 159.36 -45.07 REMARK 500 7 ALA A 52 98.12 -44.01 REMARK 500 7 GLU A 61 40.42 72.01 REMARK 500 7 LEU A 72 -60.16 -93.79 REMARK 500 8 SER A 2 42.15 34.61 REMARK 500 8 PRO A 8 -177.28 -69.83 REMARK 500 8 LYS A 23 -74.92 -94.45 REMARK 500 8 ARG A 39 -33.67 -39.26 REMARK 500 8 LEU A 42 93.98 -50.47 REMARK 500 8 ALA A 52 98.36 -45.12 REMARK 500 8 GLU A 71 -39.17 -134.86 REMARK 500 8 LEU A 72 -70.42 -88.63 REMARK 500 9 SER A 3 148.06 -171.42 REMARK 500 9 ASN A 12 103.81 -58.40 REMARK 500 9 ARG A 20 -60.71 -90.77 REMARK 500 9 LYS A 23 -73.98 -98.91 REMARK 500 9 GLN A 27 110.50 -34.47 REMARK 500 9 LEU A 42 86.97 -51.08 REMARK 500 9 CYS A 44 159.90 -46.08 REMARK 500 9 ALA A 52 99.96 -44.22 REMARK 500 9 GLU A 71 -44.04 -134.98 REMARK 500 9 PRO A 77 93.40 -69.76 REMARK 500 10 PRO A 8 79.34 -69.80 REMARK 500 10 GLU A 11 40.32 -108.65 REMARK 500 10 ASN A 12 -57.08 -122.12 REMARK 500 10 LYS A 13 44.55 -90.82 REMARK 500 10 LYS A 23 -75.17 -92.36 REMARK 500 10 THR A 24 149.36 -170.21 REMARK 500 10 LEU A 42 104.59 -48.64 REMARK 500 10 ALA A 52 98.44 -43.59 REMARK 500 10 GLU A 71 -35.39 -135.00 REMARK 500 10 LEU A 72 -65.82 -91.95 REMARK 500 10 PRO A 77 9.00 -69.81 REMARK 500 11 SER A 5 -56.84 -125.40 REMARK 500 11 CYS A 9 108.92 -174.96 REMARK 500 11 SER A 22 49.70 74.36 REMARK 500 11 LYS A 23 -75.26 -100.53 REMARK 500 11 THR A 24 148.65 -173.58 REMARK 500 11 ARG A 39 -34.99 -36.61 REMARK 500 11 LEU A 42 100.25 -49.70 REMARK 500 11 ALA A 52 100.11 -37.22 REMARK 500 11 GLU A 71 -41.79 -134.97 REMARK 500 11 SER A 75 82.55 -66.59 REMARK 500 11 PRO A 77 88.61 -69.81 REMARK 500 12 PRO A 8 88.70 -69.76 REMARK 500 12 LYS A 23 -75.75 -96.13 REMARK 500 12 ARG A 39 -38.07 -38.35 REMARK 500 12 LEU A 42 94.49 -50.66 REMARK 500 12 ALA A 52 95.04 -45.97 REMARK 500 12 GLU A 71 -45.00 -135.00 REMARK 500 13 PRO A 8 5.13 -69.76 REMARK 500 13 PHE A 14 -18.60 -49.42 REMARK 500 13 SER A 22 50.49 70.60 REMARK 500 13 LYS A 23 -73.11 -98.65 REMARK 500 13 THR A 26 -62.10 -131.40 REMARK 500 13 GLN A 27 99.09 -62.11 REMARK 500 13 LEU A 42 103.00 -46.28 REMARK 500 13 ALA A 52 98.34 -48.70 REMARK 500 13 GLU A 71 -35.93 -134.85 REMARK 500 13 PRO A 77 3.99 -69.78 REMARK 500 13 SER A 79 43.23 37.95 REMARK 500 14 ARG A 20 -64.21 -92.51 REMARK 500 14 LYS A 23 -78.29 -96.90 REMARK 500 14 ARG A 39 -36.83 -33.81 REMARK 500 14 LEU A 42 95.26 -46.53 REMARK 500 14 ALA A 52 98.59 -48.62 REMARK 500 14 GLU A 71 -45.64 -135.03 REMARK 500 14 SER A 78 42.00 -107.39 REMARK 500 15 ASN A 12 -61.03 -90.89 REMARK 500 15 SER A 22 49.86 71.38 REMARK 500 15 LYS A 23 -75.02 -95.63 REMARK 500 15 THR A 26 -38.18 -134.17 REMARK 500 15 ARG A 39 -32.82 -39.92 REMARK 500 15 LEU A 42 96.49 -50.74 REMARK 500 15 ALA A 52 98.19 -47.90 REMARK 500 15 SER A 79 42.44 -100.70 REMARK 500 16 PRO A 8 89.22 -69.83 REMARK 500 16 CYS A 9 115.76 -171.86 REMARK 500 16 GLU A 11 42.63 -99.57 REMARK 500 16 LYS A 23 -73.86 -100.12 REMARK 500 16 LEU A 42 99.46 -46.77 REMARK 500 16 ALA A 52 98.60 -48.46 REMARK 500 16 GLU A 71 -42.68 -134.91 REMARK 500 16 PRO A 77 1.45 -69.80 REMARK 500 17 ASN A 12 48.19 -76.42 REMARK 500 17 LYS A 23 -75.03 -95.48 REMARK 500 17 GLN A 27 108.95 -33.20 REMARK 500 17 LEU A 42 97.48 -50.59 REMARK 500 17 ALA A 52 100.23 -45.22 REMARK 500 17 GLU A 71 -36.84 -135.00 REMARK 500 17 LEU A 72 -63.73 -90.02 REMARK 500 17 SER A 75 140.42 -174.62 REMARK 500 17 PRO A 77 16.44 -69.78 REMARK 500 17 SER A 78 48.24 -76.18 REMARK 500 18 SER A 2 106.00 -170.93 REMARK 500 18 SER A 3 42.11 -102.17 REMARK 500 18 SER A 22 50.31 71.10 REMARK 500 18 LYS A 23 -71.13 -104.20 REMARK 500 18 ARG A 39 -36.06 -36.10 REMARK 500 18 LEU A 42 92.17 -49.26 REMARK 500 18 ALA A 52 100.47 -45.98 REMARK 500 18 GLU A 71 -39.05 -134.77 REMARK 500 19 SER A 3 130.55 -173.15 REMARK 500 19 ALA A 15 147.80 -174.63 REMARK 500 19 CYS A 18 126.84 -39.83 REMARK 500 19 SER A 22 49.60 72.36 REMARK 500 19 LYS A 23 -75.47 -93.72 REMARK 500 19 THR A 24 146.05 -173.75 REMARK 500 19 ARG A 39 -35.07 -33.14 REMARK 500 19 LEU A 42 99.52 -49.85 REMARK 500 19 CYS A 44 156.16 -48.71 REMARK 500 19 ALA A 52 94.76 -46.28 REMARK 500 19 GLU A 71 -45.18 -133.68 REMARK 500 20 SER A 2 111.50 -167.78 REMARK 500 20 PRO A 8 98.23 -69.76 REMARK 500 20 GLU A 11 118.86 -164.01 REMARK 500 20 ARG A 20 -63.46 -92.46 REMARK 500 20 LYS A 23 -75.70 -93.33 REMARK 500 20 THR A 24 144.77 -171.04 REMARK 500 20 ARG A 39 -39.20 -36.72 REMARK 500 20 LEU A 42 89.93 -49.35 REMARK 500 20 ALA A 52 101.09 -48.44 REMARK 500 20 GLU A 71 -34.99 -134.99 REMARK 500 20 LEU A 72 -62.99 -94.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 18 SG REMARK 620 2 CYS A 21 SG 120.4 REMARK 620 3 HIS A 38 ND1 86.5 113.6 REMARK 620 4 CYS A 41 SG 114.9 107.1 113.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 44 SG REMARK 620 2 CYS A 47 SG 103.2 REMARK 620 3 CYS A 65 SG 116.7 111.0 REMARK 620 4 CYS A 68 SG 86.0 118.7 117.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSI002003711.2 RELATED DB: TARGETDB DBREF 2CUQ A 8 74 UNP Q13643 FHL3_HUMAN 152 218 SEQADV 2CUQ GLY A 1 UNP Q13643 CLONING ARTIFACT SEQADV 2CUQ SER A 2 UNP Q13643 CLONING ARTIFACT SEQADV 2CUQ SER A 3 UNP Q13643 CLONING ARTIFACT SEQADV 2CUQ GLY A 4 UNP Q13643 CLONING ARTIFACT SEQADV 2CUQ SER A 5 UNP Q13643 CLONING ARTIFACT SEQADV 2CUQ SER A 6 UNP Q13643 CLONING ARTIFACT SEQADV 2CUQ GLY A 7 UNP Q13643 CLONING ARTIFACT SEQADV 2CUQ SER A 75 UNP Q13643 CLONING ARTIFACT SEQADV 2CUQ GLY A 76 UNP Q13643 CLONING ARTIFACT SEQADV 2CUQ PRO A 77 UNP Q13643 CLONING ARTIFACT SEQADV 2CUQ SER A 78 UNP Q13643 CLONING ARTIFACT SEQADV 2CUQ SER A 79 UNP Q13643 CLONING ARTIFACT SEQADV 2CUQ GLY A 80 UNP Q13643 CLONING ARTIFACT SEQRES 1 A 80 GLY SER SER GLY SER SER GLY PRO CYS TYR GLU ASN LYS SEQRES 2 A 80 PHE ALA PRO ARG CYS ALA ARG CYS SER LYS THR LEU THR SEQRES 3 A 80 GLN GLY GLY VAL THR TYR ARG ASP GLN PRO TRP HIS ARG SEQRES 4 A 80 GLU CYS LEU VAL CYS THR GLY CYS GLN THR PRO LEU ALA SEQRES 5 A 80 GLY GLN GLN PHE THR SER ARG ASP GLU ASP PRO TYR CYS SEQRES 6 A 80 VAL ALA CYS PHE GLY GLU LEU PHE ALA SER GLY PRO SER SEQRES 7 A 80 SER GLY HET ZN A 201 1 HET ZN A 401 1 HETNAM ZN ZINC ION FORMUL 2 ZN 2(ZN 2+) HELIX 1 1 VAL A 66 PHE A 73 1 8 SHEET 1 A 2 VAL A 30 THR A 31 0 SHEET 2 A 2 PRO A 36 TRP A 37 -1 O TRP A 37 N VAL A 30 SHEET 1 B 2 PHE A 56 SER A 58 0 SHEET 2 B 2 PRO A 63 CYS A 65 -1 O TYR A 64 N THR A 57 LINK ZN ZN A 201 SG CYS A 18 1555 1555 2.32 LINK ZN ZN A 201 SG CYS A 21 1555 1555 2.31 LINK ZN ZN A 201 ND1 HIS A 38 1555 1555 2.37 LINK ZN ZN A 201 SG CYS A 41 1555 1555 2.30 LINK ZN ZN A 401 SG CYS A 44 1555 1555 2.37 LINK ZN ZN A 401 SG CYS A 47 1555 1555 2.33 LINK ZN ZN A 401 SG CYS A 65 1555 1555 2.33 LINK ZN ZN A 401 SG CYS A 68 1555 1555 2.33 SITE 1 AC1 4 CYS A 18 CYS A 21 HIS A 38 CYS A 41 SITE 1 AC2 4 CYS A 44 CYS A 47 CYS A 65 CYS A 68 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 280 0 2 1 4 0 2 6 0 0 0 7 END