HEADER LIGASE 23-MAY-05 2CSW TITLE SOLUTION STRUCTURE OF THE FHA DOMAIN OF HUMAN UBIQUITIN TITLE 2 LIGASE PROTEIN RNF8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN LIGASE PROTEIN RNF8; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FHA DOMAIN; COMPND 5 SYNONYM: RING FINGER PROTEIN 8; COMPND 6 EC: 6.3.2.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RNF8; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040322-86; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS 11-STRANDED BETA SANDWICH, RING FINGER PROTEIN 8, KEYWDS 2 STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 3 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 4 GENOMICS/PROTEOMICS INITIATIVE, RSGI, LIGASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR F.HAYASHI,T.NAGASHIMA,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 2 24-FEB-09 2CSW 1 VERSN REVDAT 1 23-NOV-05 2CSW 0 JRNL AUTH F.HAYASHI,T.NAGASHIMA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE FHA DOMAIN OF HUMAN JRNL TITL 2 UBIQUITIN LIGASE PROTEIN RNF8 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CSW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB024585. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.1MM 13C,15N-LABELED REMARK 210 PROTEIN; 20MM D-TRISHCL; 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ, 900 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, NMRPIPE 20031121, REMARK 210 NMRVIEW 5.0.4, KUJIRA 0.9297, REMARK 210 CYANA 2.0 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 CYS A 19 -170.90 -172.89 REMARK 500 1 LEU A 32 68.37 -116.73 REMARK 500 1 LYS A 67 149.81 -175.01 REMARK 500 1 CYS A 135 60.50 -110.86 REMARK 500 1 PRO A 138 95.57 -69.73 REMARK 500 2 LEU A 20 71.51 -112.80 REMARK 500 2 ARG A 21 105.45 -51.60 REMARK 500 2 LYS A 67 145.33 -174.61 REMARK 500 2 LEU A 112 -175.87 -61.44 REMARK 500 2 VAL A 124 109.61 -51.60 REMARK 500 2 CYS A 135 60.52 -110.78 REMARK 500 2 PRO A 142 -173.84 -69.73 REMARK 500 3 CYS A 19 -177.96 -172.42 REMARK 500 3 LEU A 32 70.52 -117.88 REMARK 500 3 LYS A 80 77.62 51.79 REMARK 500 3 CYS A 135 61.14 -111.71 REMARK 500 3 PRO A 142 -178.05 -69.69 REMARK 500 4 ASP A 11 139.93 -175.37 REMARK 500 4 CYS A 19 -179.59 -173.70 REMARK 500 4 LEU A 20 71.90 -115.11 REMARK 500 4 ASN A 62 62.82 -115.60 REMARK 500 4 LYS A 80 82.98 50.31 REMARK 500 4 LEU A 112 -178.44 -62.69 REMARK 500 4 CYS A 135 61.65 -112.44 REMARK 500 4 PRO A 138 85.31 -69.73 REMARK 500 4 PRO A 142 -174.36 -69.76 REMARK 500 4 SER A 144 122.56 -171.58 REMARK 500 5 CYS A 19 -175.77 -173.79 REMARK 500 5 LEU A 20 73.87 -116.40 REMARK 500 5 GLN A 102 97.94 -65.73 REMARK 500 5 CYS A 135 60.68 -111.58 REMARK 500 5 PRO A 138 87.95 -69.72 REMARK 500 6 ARG A 16 170.33 -56.53 REMARK 500 6 LEU A 20 71.43 -110.84 REMARK 500 6 ARG A 21 109.32 -51.55 REMARK 500 6 LEU A 32 70.32 -118.94 REMARK 500 6 PHE A 44 32.75 -96.64 REMARK 500 6 LEU A 82 -64.34 -105.50 REMARK 500 6 CYS A 135 59.91 -108.96 REMARK 500 7 SER A 6 -73.54 -122.38 REMARK 500 7 ALA A 13 55.56 -105.01 REMARK 500 7 LEU A 20 73.94 -118.42 REMARK 500 7 LEU A 32 75.57 -117.37 REMARK 500 7 ILE A 54 -71.57 -79.94 REMARK 500 7 LYS A 80 83.73 50.46 REMARK 500 7 CYS A 135 60.60 -111.27 REMARK 500 8 ASP A 11 112.50 -164.24 REMARK 500 8 CYS A 19 -178.32 -173.72 REMARK 500 8 CYS A 55 72.98 -154.34 REMARK 500 8 LYS A 67 148.04 -175.39 REMARK 500 8 TYR A 122 -169.76 -124.95 REMARK 500 8 GLU A 123 116.62 -163.66 REMARK 500 8 CYS A 135 59.36 -107.70 REMARK 500 8 PRO A 138 91.22 -69.79 REMARK 500 9 ASP A 11 114.58 -172.92 REMARK 500 9 CYS A 19 -177.05 -171.67 REMARK 500 9 LEU A 32 76.63 -115.05 REMARK 500 9 ILE A 54 -72.29 -66.72 REMARK 500 9 LYS A 67 147.41 -173.85 REMARK 500 9 ASN A 79 68.11 -102.45 REMARK 500 9 LEU A 82 -66.05 -104.95 REMARK 500 9 CYS A 135 59.40 -109.15 REMARK 500 10 ALA A 13 76.74 -109.63 REMARK 500 10 CYS A 19 -173.89 -172.80 REMARK 500 10 LEU A 32 70.78 -116.82 REMARK 500 10 PHE A 44 33.11 -96.75 REMARK 500 10 LYS A 80 83.47 51.65 REMARK 500 10 CYS A 135 61.53 -112.92 REMARK 500 10 PRO A 142 -176.78 -69.80 REMARK 500 11 CYS A 19 -172.75 -173.09 REMARK 500 11 LEU A 20 71.27 -119.87 REMARK 500 11 ARG A 21 104.10 -51.72 REMARK 500 11 LEU A 32 68.72 -118.93 REMARK 500 11 ILE A 54 -71.14 -78.54 REMARK 500 11 LYS A 67 149.60 -172.82 REMARK 500 11 ASN A 79 57.27 -91.84 REMARK 500 11 LEU A 82 -63.48 -91.90 REMARK 500 11 ALA A 118 172.10 -55.24 REMARK 500 11 CYS A 135 60.11 -109.01 REMARK 500 12 ALA A 13 149.16 -178.27 REMARK 500 12 CYS A 19 -173.50 -172.20 REMARK 500 12 SER A 26 46.89 -90.23 REMARK 500 12 LEU A 32 70.76 -112.86 REMARK 500 12 LYS A 80 74.11 51.93 REMARK 500 12 TYR A 122 -169.88 -122.47 REMARK 500 12 GLU A 123 109.78 -163.28 REMARK 500 12 CYS A 135 60.88 -111.25 REMARK 500 12 PRO A 138 98.98 -69.76 REMARK 500 13 SER A 3 93.73 -65.11 REMARK 500 13 ASP A 11 114.41 -175.14 REMARK 500 13 CYS A 19 -174.03 -173.73 REMARK 500 13 ARG A 21 106.03 -51.79 REMARK 500 13 LEU A 32 71.03 -115.00 REMARK 500 13 LEU A 82 -66.01 -100.64 REMARK 500 13 CYS A 135 61.34 -112.49 REMARK 500 13 PRO A 138 97.41 -69.74 REMARK 500 14 ASP A 11 114.09 -170.29 REMARK 500 14 LEU A 20 76.09 -117.85 REMARK 500 14 PHE A 44 33.85 -99.93 REMARK 500 14 CYS A 55 72.70 -151.42 REMARK 500 14 GLN A 102 105.25 -52.38 REMARK 500 14 CYS A 135 59.27 -108.48 REMARK 500 14 PRO A 138 97.61 -69.77 REMARK 500 15 SER A 2 -62.68 -91.95 REMARK 500 15 ASP A 11 52.03 -110.94 REMARK 500 15 CYS A 19 -177.56 -173.85 REMARK 500 15 LEU A 20 73.91 -114.92 REMARK 500 15 LYS A 80 86.78 51.22 REMARK 500 15 GLN A 102 105.19 -55.28 REMARK 500 15 CYS A 135 61.85 -112.80 REMARK 500 16 LEU A 20 74.78 -114.19 REMARK 500 16 ARG A 21 108.34 -51.91 REMARK 500 16 LYS A 67 148.17 -176.39 REMARK 500 16 ASN A 79 67.09 -101.92 REMARK 500 16 VAL A 124 106.71 -56.44 REMARK 500 16 CYS A 135 61.95 -113.13 REMARK 500 17 VAL A 8 75.54 54.50 REMARK 500 17 ASP A 11 38.63 -95.44 REMARK 500 17 LEU A 20 77.95 -117.95 REMARK 500 17 LEU A 32 69.09 -115.42 REMARK 500 17 PHE A 44 30.25 -97.16 REMARK 500 17 LYS A 80 75.65 51.92 REMARK 500 17 GLN A 102 106.90 -57.55 REMARK 500 17 CYS A 135 59.93 -109.60 REMARK 500 17 SER A 140 60.55 -102.97 REMARK 500 17 SER A 143 -74.29 -123.30 REMARK 500 18 ALA A 13 103.21 -160.11 REMARK 500 18 LEU A 20 79.63 -116.87 REMARK 500 18 PHE A 44 52.26 -100.57 REMARK 500 18 ILE A 54 -72.44 -74.96 REMARK 500 18 CYS A 135 60.15 -109.78 REMARK 500 19 CYS A 19 -170.19 -173.16 REMARK 500 19 ARG A 21 107.48 -51.50 REMARK 500 19 LEU A 32 69.60 -116.14 REMARK 500 19 ILE A 54 -72.27 -69.41 REMARK 500 19 LYS A 80 82.40 51.92 REMARK 500 19 LEU A 82 -62.99 -97.02 REMARK 500 19 LEU A 112 -178.80 -61.45 REMARK 500 19 CYS A 135 61.72 -112.49 REMARK 500 19 PRO A 142 98.70 -69.74 REMARK 500 20 ALA A 13 68.36 62.51 REMARK 500 20 CYS A 19 -171.47 -171.54 REMARK 500 20 ARG A 21 109.10 -51.61 REMARK 500 20 LYS A 80 87.09 52.71 REMARK 500 20 GLN A 102 91.02 -69.35 REMARK 500 20 CYS A 135 60.88 -111.98 REMARK 500 20 PRO A 142 -172.26 -69.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSS001001223.1 RELATED DB: TARGETDB DBREF 2CSW A 8 139 UNP O76064 RNF8_HUMAN 8 139 SEQADV 2CSW GLY A 1 UNP O76064 CLONING ARTIFACT SEQADV 2CSW SER A 2 UNP O76064 CLONING ARTIFACT SEQADV 2CSW SER A 3 UNP O76064 CLONING ARTIFACT SEQADV 2CSW GLY A 4 UNP O76064 CLONING ARTIFACT SEQADV 2CSW SER A 5 UNP O76064 CLONING ARTIFACT SEQADV 2CSW SER A 6 UNP O76064 CLONING ARTIFACT SEQADV 2CSW GLY A 7 UNP O76064 CLONING ARTIFACT SEQADV 2CSW SER A 140 UNP O76064 CLONING ARTIFACT SEQADV 2CSW GLY A 141 UNP O76064 CLONING ARTIFACT SEQADV 2CSW PRO A 142 UNP O76064 CLONING ARTIFACT SEQADV 2CSW SER A 143 UNP O76064 CLONING ARTIFACT SEQADV 2CSW SER A 144 UNP O76064 CLONING ARTIFACT SEQADV 2CSW GLY A 145 UNP O76064 CLONING ARTIFACT SEQRES 1 A 145 GLY SER SER GLY SER SER GLY VAL THR GLY ASP ARG ALA SEQRES 2 A 145 GLY GLY ARG SER TRP CYS LEU ARG ARG VAL GLY MET SER SEQRES 3 A 145 ALA GLY TRP LEU LEU LEU GLU ASP GLY CYS GLU VAL THR SEQRES 4 A 145 VAL GLY ARG GLY PHE GLY VAL THR TYR GLN LEU VAL SER SEQRES 5 A 145 LYS ILE CYS PRO LEU MET ILE SER ARG ASN HIS CYS VAL SEQRES 6 A 145 LEU LYS GLN ASN PRO GLU GLY GLN TRP THR ILE MET ASP SEQRES 7 A 145 ASN LYS SER LEU ASN GLY VAL TRP LEU ASN ARG ALA ARG SEQRES 8 A 145 LEU GLU PRO LEU ARG VAL TYR SER ILE HIS GLN GLY ASP SEQRES 9 A 145 TYR ILE GLN LEU GLY VAL PRO LEU GLU ASN LYS GLU ASN SEQRES 10 A 145 ALA GLU TYR GLU TYR GLU VAL THR GLU GLU ASP TRP GLU SEQRES 11 A 145 THR ILE TYR PRO CYS LEU SER PRO LYS SER GLY PRO SER SEQRES 12 A 145 SER GLY HELIX 1 1 CYS A 55 ILE A 59 5 5 HELIX 2 2 TRP A 129 TYR A 133 1 5 SHEET 1 A 3 LEU A 30 LEU A 31 0 SHEET 2 A 3 ARG A 16 LEU A 20 -1 N LEU A 20 O LEU A 30 SHEET 3 A 3 VAL A 124 ASP A 128 -1 O THR A 125 N CYS A 19 SHEET 1 B 5 TYR A 48 GLN A 49 0 SHEET 2 B 5 VAL A 38 GLY A 41 1 N THR A 39 O TYR A 48 SHEET 3 B 5 CYS A 64 GLN A 68 -1 O LEU A 66 N VAL A 38 SHEET 4 B 5 TRP A 74 MET A 77 -1 O MET A 77 N VAL A 65 SHEET 5 B 5 TYR A 98 SER A 99 -1 O TYR A 98 N ILE A 76 SHEET 1 C 2 VAL A 85 LEU A 87 0 SHEET 2 C 2 ILE A 106 LEU A 108 -1 O GLN A 107 N TRP A 86 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 221 0 0 2 10 0 0 6 0 0 0 12 END