HEADER SUGAR BINDING PROTEIN 12-OCT-05 2C3W TITLE STRUCTURE OF CBM25 FROM BACILLUS HALODURANS AMYLASE IN COMPLEX WITH TITLE 2 MALTOTETRAOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-AMYLASE G-6; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: CARBOHYDRATE-BINDING MODULE, RESIDUES 863-958; COMPND 5 SYNONYM: FAMILY 25 CARBOHYDRATE-BINDING MODULE; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS HALODURANS; SOURCE 3 ORGANISM_TAXID: 272558; SOURCE 4 STRAIN: C-125; SOURCE 5 ATCC: BAA-125; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET 28A; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-BHCBM6 KEYWDS SUGAR-BINDING PROTEIN, CARBOHYDRATE-BINDING MODULE, STARCH BINDING, KEYWDS 2 CARBOHYDRATE BINDING, GLYCOSIDE HYDROLASE, AMYLOSE, AMYLOPECTIN, KEYWDS 3 MALTO-OLIGOSACCHARIDE, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.B.BORASTON,M.HEALEY,J.KLASSEN,E.FICKO-BLEAN,A.LAMMERTS VAN BUEREN, AUTHOR 2 V.LAW REVDAT 4 29-JUL-20 2C3W 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 24-FEB-09 2C3W 1 VERSN REVDAT 2 18-JAN-06 2C3W 1 JRNL REVDAT 1 17-OCT-05 2C3W 0 JRNL AUTH A.B.BORASTON,M.HEALEY,J.KLASSEN,E.FICKO-BLEAN, JRNL AUTH 2 A.LAMMERTS VAN BUEREN,V.LAW JRNL TITL A STRUCTURAL AND FUNCTIONAL ANALYSIS OF ALPHA-GLUCAN JRNL TITL 2 RECOGNITION BY FAMILY 25 AND 26 CARBOHYDRATE-BINDING MODULES JRNL TITL 3 REVEALS A CONSERVED MODE OF STARCH RECOGNITION JRNL REF J.BIOL.CHEM. V. 281 587 2006 JRNL REFN ISSN 0021-9258 JRNL PMID 16230347 JRNL DOI 10.1074/JBC.M509958200 REMARK 2 REMARK 2 RESOLUTION. 1.81 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 63.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 47599 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2544 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.81 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.86 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3517 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2260 REMARK 3 BIN FREE R VALUE SET COUNT : 182 REMARK 3 BIN FREE R VALUE : 0.2790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2959 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 414 REMARK 3 SOLVENT ATOMS : 783 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.29000 REMARK 3 B22 (A**2) : -1.24000 REMARK 3 B33 (A**2) : 1.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.86000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.107 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.110 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.368 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3486 ; 0.020 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2764 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4806 ; 1.975 ; 2.056 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6412 ; 1.375 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 376 ; 7.036 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 610 ; 0.149 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3485 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 635 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 578 ; 0.220 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3358 ; 0.273 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1865 ; 0.095 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 532 ; 0.170 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 7 ; 0.228 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 35 ; 0.358 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 52 ; 0.161 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1861 ; 1.184 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2986 ; 2.105 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1625 ; 3.200 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1819 ; 5.072 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2C3W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-OCT-05. REMARK 100 THE DEPOSITION ID IS D_1290025973. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 113.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47599 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.810 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 47.27650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, K, L, M REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 HIS A 3 REMARK 465 MET A 4 REMARK 465 ALA A 5 REMARK 465 SER A 6 REMARK 465 GLY A 7 REMARK 465 GLY B 1 REMARK 465 SER B 2 REMARK 465 HIS B 3 REMARK 465 MET B 4 REMARK 465 ALA B 5 REMARK 465 SER B 6 REMARK 465 GLY B 7 REMARK 465 GLY C 1 REMARK 465 SER C 2 REMARK 465 HIS C 3 REMARK 465 MET C 4 REMARK 465 ALA C 5 REMARK 465 SER C 6 REMARK 465 GLY C 7 REMARK 465 GLY D 1 REMARK 465 SER D 2 REMARK 465 HIS D 3 REMARK 465 MET D 4 REMARK 465 ALA D 5 REMARK 465 SER D 6 REMARK 465 GLY D 7 REMARK 465 ASP D 8 REMARK 465 LYS D 102 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 2151 O HOH C 2056 2645 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 8 CB - CG - OD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP A 11 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP B 11 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 10 -78.78 -121.60 REMARK 500 ASP A 81 166.60 69.55 REMARK 500 THR B 10 -70.97 -116.14 REMARK 500 ASP B 81 162.60 64.59 REMARK 500 THR C 10 -74.94 -118.86 REMARK 500 GLN C 31 18.97 59.61 REMARK 500 ASP C 81 168.62 64.54 REMARK 500 THR D 10 -63.94 -123.00 REMARK 500 GLN D 31 19.72 59.76 REMARK 500 ASP D 81 165.41 65.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2021 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH A2029 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH A2173 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH B2007 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH C2016 DISTANCE = 7.11 ANGSTROMS REMARK 525 HOH C2026 DISTANCE = 6.04 ANGSTROMS REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2C3G RELATED DB: PDB REMARK 900 STRUCTURE OF CBM26 FROM BACILLUS HALODURANS AMYLASE REMARK 900 RELATED ID: 2C3H RELATED DB: PDB REMARK 900 STRUCTURE OF CBM26 FROM BACILLUS HALODURANS AMYLASE IN COMPLEX WITH REMARK 900 MALTOSE REMARK 900 RELATED ID: 2C3V RELATED DB: PDB REMARK 900 STRUCTURE OF IODINATED CBM25 FROM BACILLUS HALODURANS AMYLASE REMARK 900 RELATED ID: 2C3X RELATED DB: PDB REMARK 900 STRUCTURE OF IODINATED CBM25 FROM BACILLUS HALODURANS AMYLASE IN REMARK 900 COMPLEX WITH MALTOTETRAOSE DBREF 2C3W A 1 6 PDB 2C3W 2C3W 1 6 DBREF 2C3W A 7 102 UNP Q9KFR4 Q9KFR4_BACHD 863 958 DBREF 2C3W B 1 6 PDB 2C3W 2C3W 1 6 DBREF 2C3W B 7 102 UNP Q9KFR4 Q9KFR4_BACHD 863 958 DBREF 2C3W C 1 6 PDB 2C3W 2C3W 1 6 DBREF 2C3W C 7 102 UNP Q9KFR4 Q9KFR4_BACHD 863 958 DBREF 2C3W D 1 6 PDB 2C3W 2C3W 1 6 DBREF 2C3W D 7 102 UNP Q9KFR4 Q9KFR4_BACHD 863 958 SEQRES 1 A 102 GLY SER HIS MET ALA SER GLY ASP ALA THR ASP ILE THR SEQRES 2 A 102 ILE TYR TYR LYS THR GLY TRP THR HIS PRO HIS ILE HIS SEQRES 3 A 102 TYR SER LEU ASN GLN GLY ALA TRP THR THR LEU PRO GLY SEQRES 4 A 102 VAL PRO LEU THR LYS SER GLU TYR GLU GLY TYR VAL LYS SEQRES 5 A 102 VAL THR ILE GLU ALA GLU GLU GLY SER GLN LEU ARG ALA SEQRES 6 A 102 ALA PHE ASN ASN GLY SER GLY GLN TRP ASP ASN ASN GLN SEQRES 7 A 102 GLY ARG ASP TYR ASP PHE SER SER GLY VAL HIS THR LEU SEQRES 8 A 102 ALA ASP GLY ARG ILE LEU SER GLY THR PRO LYS SEQRES 1 B 102 GLY SER HIS MET ALA SER GLY ASP ALA THR ASP ILE THR SEQRES 2 B 102 ILE TYR TYR LYS THR GLY TRP THR HIS PRO HIS ILE HIS SEQRES 3 B 102 TYR SER LEU ASN GLN GLY ALA TRP THR THR LEU PRO GLY SEQRES 4 B 102 VAL PRO LEU THR LYS SER GLU TYR GLU GLY TYR VAL LYS SEQRES 5 B 102 VAL THR ILE GLU ALA GLU GLU GLY SER GLN LEU ARG ALA SEQRES 6 B 102 ALA PHE ASN ASN GLY SER GLY GLN TRP ASP ASN ASN GLN SEQRES 7 B 102 GLY ARG ASP TYR ASP PHE SER SER GLY VAL HIS THR LEU SEQRES 8 B 102 ALA ASP GLY ARG ILE LEU SER GLY THR PRO LYS SEQRES 1 C 102 GLY SER HIS MET ALA SER GLY ASP ALA THR ASP ILE THR SEQRES 2 C 102 ILE TYR TYR LYS THR GLY TRP THR HIS PRO HIS ILE HIS SEQRES 3 C 102 TYR SER LEU ASN GLN GLY ALA TRP THR THR LEU PRO GLY SEQRES 4 C 102 VAL PRO LEU THR LYS SER GLU TYR GLU GLY TYR VAL LYS SEQRES 5 C 102 VAL THR ILE GLU ALA GLU GLU GLY SER GLN LEU ARG ALA SEQRES 6 C 102 ALA PHE ASN ASN GLY SER GLY GLN TRP ASP ASN ASN GLN SEQRES 7 C 102 GLY ARG ASP TYR ASP PHE SER SER GLY VAL HIS THR LEU SEQRES 8 C 102 ALA ASP GLY ARG ILE LEU SER GLY THR PRO LYS SEQRES 1 D 102 GLY SER HIS MET ALA SER GLY ASP ALA THR ASP ILE THR SEQRES 2 D 102 ILE TYR TYR LYS THR GLY TRP THR HIS PRO HIS ILE HIS SEQRES 3 D 102 TYR SER LEU ASN GLN GLY ALA TRP THR THR LEU PRO GLY SEQRES 4 D 102 VAL PRO LEU THR LYS SER GLU TYR GLU GLY TYR VAL LYS SEQRES 5 D 102 VAL THR ILE GLU ALA GLU GLU GLY SER GLN LEU ARG ALA SEQRES 6 D 102 ALA PHE ASN ASN GLY SER GLY GLN TRP ASP ASN ASN GLN SEQRES 7 D 102 GLY ARG ASP TYR ASP PHE SER SER GLY VAL HIS THR LEU SEQRES 8 D 102 ALA ASP GLY ARG ILE LEU SER GLY THR PRO LYS HET GLC E 1 12 HET GLC E 2 11 HET GLC E 3 11 HET GLC E 4 11 HET GLC F 1 12 HET GLC F 2 11 HET GLC F 3 11 HET GLC F 4 11 HET GLC G 1 12 HET GLC G 2 11 HET GLC G 3 11 HET GLC H 1 12 HET GLC H 2 11 HET GLC H 3 11 HET GLC H 4 11 HET GLC I 1 12 HET GLC I 2 11 HET GLC I 3 11 HET GLC I 4 11 HET GLC J 1 12 HET GLC J 2 11 HET GLC J 3 11 HET GLC J 4 11 HET GLC K 1 12 HET GLC K 2 11 HET GLC K 3 11 HET GLC K 4 11 HET GLC L 1 12 HET GLC L 2 11 HET GLC L 3 11 HET GLC L 4 11 HET GLC M 1 12 HET GLC M 2 11 HET GLC M 3 11 HET GLC M 4 11 HET SO4 A1112 5 HET SO4 B1110 5 HET SO4 C1110 5 HET SO4 D1114 5 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM SO4 SULFATE ION FORMUL 5 GLC 35(C6 H12 O6) FORMUL 14 SO4 4(O4 S 2-) FORMUL 18 HOH *783(H2 O) SHEET 1 AA 5 THR A 43 LYS A 44 0 SHEET 2 AA 5 TYR A 50 ILE A 55 -1 O LYS A 52 N THR A 43 SHEET 3 AA 5 ILE A 12 LYS A 17 -1 O ILE A 12 N ILE A 55 SHEET 4 AA 5 GLY A 87 ALA A 92 1 O GLY A 87 N THR A 13 SHEET 5 AA 5 ARG A 95 SER A 98 -1 O ARG A 95 N ALA A 92 SHEET 1 AB 4 VAL A 40 PRO A 41 0 SHEET 2 AB 4 HIS A 24 LEU A 29 -1 O ILE A 25 N VAL A 40 SHEET 3 AB 4 GLN A 62 ASN A 68 -1 O ARG A 64 N SER A 28 SHEET 4 AB 4 TYR A 82 SER A 85 -1 O TYR A 82 N ALA A 65 SHEET 1 AC 4 VAL A 40 PRO A 41 0 SHEET 2 AC 4 HIS A 24 LEU A 29 -1 O ILE A 25 N VAL A 40 SHEET 3 AC 4 GLN A 62 ASN A 68 -1 O ARG A 64 N SER A 28 SHEET 4 AC 4 TRP A 74 ASP A 75 -1 O ASP A 75 N PHE A 67 SHEET 1 BA 5 THR B 43 LYS B 44 0 SHEET 2 BA 5 TYR B 50 ILE B 55 -1 O LYS B 52 N THR B 43 SHEET 3 BA 5 ILE B 12 LYS B 17 -1 O ILE B 12 N ILE B 55 SHEET 4 BA 5 GLY B 87 ALA B 92 1 O GLY B 87 N THR B 13 SHEET 5 BA 5 ARG B 95 SER B 98 -1 O ARG B 95 N ALA B 92 SHEET 1 BB 4 VAL B 40 PRO B 41 0 SHEET 2 BB 4 HIS B 24 LEU B 29 -1 O ILE B 25 N VAL B 40 SHEET 3 BB 4 GLN B 62 ASN B 68 -1 O ARG B 64 N SER B 28 SHEET 4 BB 4 TYR B 82 SER B 85 -1 O TYR B 82 N ALA B 65 SHEET 1 BC 4 VAL B 40 PRO B 41 0 SHEET 2 BC 4 HIS B 24 LEU B 29 -1 O ILE B 25 N VAL B 40 SHEET 3 BC 4 GLN B 62 ASN B 68 -1 O ARG B 64 N SER B 28 SHEET 4 BC 4 TRP B 74 ASP B 75 -1 O ASP B 75 N PHE B 67 SHEET 1 CA 5 THR C 43 LYS C 44 0 SHEET 2 CA 5 TYR C 50 ILE C 55 -1 O LYS C 52 N THR C 43 SHEET 3 CA 5 ILE C 12 LYS C 17 -1 O ILE C 12 N ILE C 55 SHEET 4 CA 5 GLY C 87 ALA C 92 1 O GLY C 87 N THR C 13 SHEET 5 CA 5 ARG C 95 SER C 98 -1 O ARG C 95 N ALA C 92 SHEET 1 CB 4 VAL C 40 PRO C 41 0 SHEET 2 CB 4 HIS C 24 LEU C 29 -1 O ILE C 25 N VAL C 40 SHEET 3 CB 4 GLN C 62 ASN C 68 -1 O ARG C 64 N SER C 28 SHEET 4 CB 4 TYR C 82 SER C 85 -1 O TYR C 82 N ALA C 65 SHEET 1 CC 4 VAL C 40 PRO C 41 0 SHEET 2 CC 4 HIS C 24 LEU C 29 -1 O ILE C 25 N VAL C 40 SHEET 3 CC 4 GLN C 62 ASN C 68 -1 O ARG C 64 N SER C 28 SHEET 4 CC 4 TRP C 74 ASP C 75 -1 O ASP C 75 N PHE C 67 SHEET 1 DA 5 THR D 43 LYS D 44 0 SHEET 2 DA 5 TYR D 50 ILE D 55 -1 O LYS D 52 N THR D 43 SHEET 3 DA 5 ILE D 12 LYS D 17 -1 O ILE D 12 N ILE D 55 SHEET 4 DA 5 GLY D 87 ALA D 92 1 O GLY D 87 N THR D 13 SHEET 5 DA 5 ARG D 95 SER D 98 -1 O ARG D 95 N ALA D 92 SHEET 1 DB 7 VAL D 40 PRO D 41 0 SHEET 2 DB 7 HIS D 24 LEU D 29 -1 O ILE D 25 N VAL D 40 SHEET 3 DB 7 GLN D 62 ASN D 68 -1 O ARG D 64 N SER D 28 SHEET 4 DB 7 TRP D 74 ASP D 75 -1 O ASP D 75 N PHE D 67 SHEET 5 DB 7 GLN D 62 ASN D 68 -1 O PHE D 67 N ASP D 75 SHEET 6 DB 7 TYR D 82 SER D 85 -1 O TYR D 82 N ALA D 65 SHEET 7 DB 7 GLN D 62 ASN D 68 -1 O LEU D 63 N PHE D 84 LINK O4 GLC E 1 C1 GLC E 2 1555 1555 1.44 LINK O4 GLC E 2 C1 GLC E 3 1555 1555 1.44 LINK O4 GLC E 3 C1 GLC E 4 1555 1555 1.45 LINK O4 GLC F 1 C1 GLC F 2 1555 1555 1.47 LINK O4 GLC F 2 C1 GLC F 3 1555 1555 1.43 LINK O4 GLC F 3 C1 GLC F 4 1555 1555 1.46 LINK O4 GLC G 1 C1 GLC G 2 1555 1555 1.46 LINK O4 GLC G 2 C1 GLC G 3 1555 1555 1.45 LINK O4 GLC H 1 C1 GLC H 2 1555 1555 1.45 LINK O4 GLC H 2 C1 GLC H 3 1555 1555 1.45 LINK O4 GLC H 3 C1 GLC H 4 1555 1555 1.46 LINK O4 GLC I 1 C1 GLC I 2 1555 1555 1.47 LINK O4 GLC I 2 C1 GLC I 3 1555 1555 1.42 LINK O4 GLC I 3 C1 GLC I 4 1555 1555 1.48 LINK O4 GLC J 1 C1 GLC J 2 1555 1555 1.43 LINK O4 GLC J 2 C1 GLC J 3 1555 1555 1.44 LINK O4 GLC J 3 C1 GLC J 4 1555 1555 1.47 LINK O4 GLC K 1 C1 GLC K 2 1555 1555 1.43 LINK O4 GLC K 2 C1 GLC K 3 1555 1555 1.43 LINK O4 GLC K 3 C1 GLC K 4 1555 1555 1.42 LINK O4 GLC L 1 C1 GLC L 2 1555 1555 1.44 LINK O4 GLC L 2 C1 GLC L 3 1555 1555 1.43 LINK O4 GLC L 3 C1 GLC L 4 1555 1555 1.46 LINK O4 GLC M 1 C1 GLC M 2 1555 1555 1.43 LINK O4 GLC M 2 C1 GLC M 3 1555 1555 1.43 LINK O4 GLC M 3 C1 GLC M 4 1555 1555 1.47 CISPEP 1 LEU A 37 PRO A 38 0 10.49 CISPEP 2 LEU B 37 PRO B 38 0 -0.88 CISPEP 3 LEU C 37 PRO C 38 0 1.61 CISPEP 4 LEU D 37 PRO D 38 0 -0.98 CRYST1 47.533 94.553 64.868 90.00 104.65 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021038 0.000000 0.005500 0.00000 SCALE2 0.000000 0.010576 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015934 0.00000 MASTER 393 0 39 0 51 0 0 6 0 0 0 32 END