HEADER HYDROLASE 21-OCT-05 2BDZ TITLE MEXICAIN FROM JACARATIA MEXICANA COMPND MOL_ID: 1; COMPND 2 MOLECULE: MEXICAIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 3.4.22.- SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: JACARATIA MEXICANA; SOURCE 3 ORGANISM_TAXID: 309130; SOURCE 4 OTHER_DETAILS: LATEX KEYWDS MEXICAIN, CYSTEINE PROTEASE, PEPTIDASE_C1, PAPAIN-LIKE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.A.GAVIRA,M.C.OLIVER-SALVADOR,L.A.GONZALEZ-RAMIREZ,M.SORIANO-GARCIA, AUTHOR 2 J.M.GARCIA-RUIZ REVDAT 4 24-JUL-19 2BDZ 1 REMARK LINK REVDAT 3 09-MAR-11 2BDZ 1 REMARK REVDAT 2 24-FEB-09 2BDZ 1 VERSN REVDAT 1 03-OCT-06 2BDZ 0 JRNL AUTH J.A.GAVIRA,M.C.OLIVER-SALVADOR,L.A.GONZALEZ-RAMIREZ, JRNL AUTH 2 M.SORIANO-GARCIA,J.M.GARCIA-RUIZ JRNL TITL CRYSTALLOGRAPHIC STRUCTURE OF MEXICAIN FROM JACARATIA JRNL TITL 2 MEXICANA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.C.OLIVER-SALVADOR,L.A.GONZALEZ-RAMIREZ,J.A.GAVIRA, REMARK 1 AUTH 2 M.SORIANO-GARCIA,J.M.GARCIA-RUIZ REMARK 1 TITL PURIFICATION, CRYSTALLIZATION AND PRELIMINARY X-RAY ANALYSIS REMARK 1 TITL 2 OF MEXICAIN REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 60 2058 2004 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 15502326 REMARK 1 DOI 10.1107/S0907444904021638 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 40977 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4576 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2707 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.1890 REMARK 3 BIN FREE R VALUE SET COUNT : 295 REMARK 3 BIN FREE R VALUE : 0.2970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6472 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 100 REMARK 3 SOLVENT ATOMS : 379 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.66000 REMARK 3 B22 (A**2) : 1.05000 REMARK 3 B33 (A**2) : -0.42000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.27000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.288 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.218 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.137 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.066 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.889 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6786 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9206 ; 1.092 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 844 ; 6.222 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 283 ;35.388 ;23.958 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1074 ;12.555 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;18.847 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 987 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5166 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3462 ; 0.203 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4695 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 607 ; 0.129 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 60 ; 0.152 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 18 ; 0.128 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4312 ; 1.235 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6742 ; 1.819 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2900 ; 1.300 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2464 ; 1.801 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: MOLPROBITY, XTALVIEW WERE ALSO USED FOR REMARK 3 THE REFINEMENT. REMARK 4 REMARK 4 2BDZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-NOV-05. REMARK 100 THE DEPOSITION ID IS D_1000034981. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-SEP-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 10.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NONIUS KAPPA CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47249 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 40.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.2710 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.29600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.495 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: THE INITIAL MODEL WAS CALCULATED USING THE SWISS REMARK 200 -MODEL SERVER USING PROMODII FOR MODELLING AND GROMOS96 FOR REMARK 200 ENERGY MINIMIZATION (SCHWEDE ET AL., 2000). INITIAL MODELS PDB REMARK 200 I.DS.: 1YAL, 1GEC, 1PPO, 1MEG AND 1PCI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 % (W/V) PEGL 6000, 0.1 M CITRATE, REMARK 280 15 % (V/V) ETHANOLAMINE, PH 10.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 45.22700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS THE MONOMER. THE ASYMETRIC UNIT REMARK 300 CONTAINS FOUR BIOLOGICAL UNITS NAMED A,B,C AND D. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR A 213 REMARK 465 ARG A 214 REMARK 465 TYR B 213 REMARK 465 ARG B 214 REMARK 465 TYR C 213 REMARK 465 ARG C 214 REMARK 465 TYR D 213 REMARK 465 ARG D 214 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 9 CD OE1 OE2 REMARK 470 ARG A 59 NE CZ NH1 NH2 REMARK 470 ARG A 84 CD NE CZ NH1 NH2 REMARK 470 LYS A 98 CD CE NZ REMARK 470 LYS A 101 CG CD CE NZ REMARK 470 LYS A 111 CD CE NZ REMARK 470 ARG A 139 CD NE CZ NH1 NH2 REMARK 470 LYS A 145 CG CD CE NZ REMARK 470 LYS A 168 CD CE NZ REMARK 470 LYS A 184 CD CE NZ REMARK 470 GLU B 3 CG CD OE1 OE2 REMARK 470 LYS B 10 NZ REMARK 470 GLN B 44 CD OE1 NE2 REMARK 470 ARG B 59 NH1 NH2 REMARK 470 ARG B 84 CD NE CZ NH1 NH2 REMARK 470 ARG B 96 CZ NH1 NH2 REMARK 470 LYS B 101 CG CD CE NZ REMARK 470 LYS B 111 CD CE NZ REMARK 470 LYS B 145 CD CE NZ REMARK 470 LYS B 168 CD CE NZ REMARK 470 LYS B 184 CD CE NZ REMARK 470 LYS B 190 NZ REMARK 470 GLU C 3 CG CD OE1 OE2 REMARK 470 GLU C 9 CD OE1 OE2 REMARK 470 ARG C 84 CD NE CZ NH1 NH2 REMARK 470 LYS C 101 CG CD CE NZ REMARK 470 LYS C 111 CD CE NZ REMARK 470 LYS C 168 NZ REMARK 470 LYS C 184 NZ REMARK 470 ARG C 195 NE CZ NH1 NH2 REMARK 470 TYR D 1 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU D 3 CG CD OE1 OE2 REMARK 470 ARG D 59 NH1 NH2 REMARK 470 ARG D 84 NE CZ NH1 NH2 REMARK 470 LYS D 98 NZ REMARK 470 LYS D 101 CG CD CE NZ REMARK 470 LYS D 145 CD CE NZ REMARK 470 LYS D 168 CG CD CE NZ REMARK 470 LYS D 190 CE NZ REMARK 470 ARG D 195 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 15 150.32 -49.88 REMARK 500 HIS A 61 40.87 -107.11 REMARK 500 CYS A 153 143.80 -171.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE E64 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE E64 B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE E64 C 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE E64 D 504 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1YAL RELATED DB: PDB REMARK 900 RELATED ID: 1GEC RELATED DB: PDB REMARK 900 RELATED ID: 1PPO RELATED DB: PDB REMARK 900 RELATED ID: 1MEG RELATED DB: PDB REMARK 900 RELATED ID: 1PCI RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 AMINOACIDS R58 AND T70 APPEAR IN THE DEPOSITED SEQUENCE REMARK 999 P84346 (NAME: MEX1_JACME) OF THE SWS DATA BASE AS Y58 REMARK 999 AND P70 RESPECTIVELY BUT THERE ARE CLEAR EVIDENCES FOR REMARK 999 THE CURRENT SUBSTITUTIONS POINTING TO SEQUENCIATION ERRORS. DBREF 2BDZ A 1 214 UNP P84346 MEX1_JACME 1 214 DBREF 2BDZ B 1 214 UNP P84346 MEX1_JACME 1 214 DBREF 2BDZ C 1 214 UNP P84346 MEX1_JACME 1 214 DBREF 2BDZ D 1 214 UNP P84346 MEX1_JACME 1 214 SEQADV 2BDZ ARG A 58 UNP P84346 TYR 58 SEE REMARK 999 SEQADV 2BDZ THR A 70 UNP P84346 PRO 70 SEE REMARK 999 SEQADV 2BDZ ARG B 58 UNP P84346 TYR 58 SEE REMARK 999 SEQADV 2BDZ THR B 70 UNP P84346 PRO 70 SEE REMARK 999 SEQADV 2BDZ ARG C 58 UNP P84346 TYR 58 SEE REMARK 999 SEQADV 2BDZ THR C 70 UNP P84346 PRO 70 SEE REMARK 999 SEQADV 2BDZ ARG D 58 UNP P84346 TYR 58 SEE REMARK 999 SEQADV 2BDZ THR D 70 UNP P84346 PRO 70 SEE REMARK 999 SEQRES 1 A 214 TYR PRO GLU SER ILE ASP TRP ARG GLU LYS GLY ALA VAL SEQRES 2 A 214 THR PRO VAL LYS ASN GLN ASN PRO CYS GLY SER CYS TRP SEQRES 3 A 214 ALA PHE SER THR VAL ALA THR ILE GLU GLY ILE ASN LYS SEQRES 4 A 214 ILE ILE THR GLY GLN LEU ILE SER LEU SER GLU GLN GLU SEQRES 5 A 214 LEU LEU ASP CYS GLU ARG ARG SER HIS GLY CYS ASP GLY SEQRES 6 A 214 GLY TYR GLN THR THR SER LEU GLN TYR VAL VAL ASP ASN SEQRES 7 A 214 GLY VAL HIS THR GLU ARG GLU TYR PRO TYR GLU LYS LYS SEQRES 8 A 214 GLN GLY ARG CYS ARG ALA LYS ASP LYS LYS GLY PRO LYS SEQRES 9 A 214 VAL TYR ILE THR GLY TYR LYS TYR VAL PRO ALA ASN ASP SEQRES 10 A 214 GLU ILE SER LEU ILE GLN ALA ILE ALA ASN GLN PRO VAL SEQRES 11 A 214 SER VAL VAL THR ASP SER ARG GLY ARG GLY PHE GLN PHE SEQRES 12 A 214 TYR LYS GLY GLY ILE TYR GLU GLY PRO CYS GLY THR ASN SEQRES 13 A 214 THR ASP HIS ALA VAL THR ALA VAL GLY TYR GLY LYS THR SEQRES 14 A 214 TYR LEU LEU LEU LYS ASN SER TRP GLY PRO ASN TRP GLY SEQRES 15 A 214 GLU LYS GLY TYR ILE ARG ILE LYS ARG ALA SER GLY ARG SEQRES 16 A 214 SER LYS GLY THR CYS GLY VAL TYR THR SER SER PHE PHE SEQRES 17 A 214 PRO ILE LYS GLY TYR ARG SEQRES 1 B 214 TYR PRO GLU SER ILE ASP TRP ARG GLU LYS GLY ALA VAL SEQRES 2 B 214 THR PRO VAL LYS ASN GLN ASN PRO CYS GLY SER CYS TRP SEQRES 3 B 214 ALA PHE SER THR VAL ALA THR ILE GLU GLY ILE ASN LYS SEQRES 4 B 214 ILE ILE THR GLY GLN LEU ILE SER LEU SER GLU GLN GLU SEQRES 5 B 214 LEU LEU ASP CYS GLU ARG ARG SER HIS GLY CYS ASP GLY SEQRES 6 B 214 GLY TYR GLN THR THR SER LEU GLN TYR VAL VAL ASP ASN SEQRES 7 B 214 GLY VAL HIS THR GLU ARG GLU TYR PRO TYR GLU LYS LYS SEQRES 8 B 214 GLN GLY ARG CYS ARG ALA LYS ASP LYS LYS GLY PRO LYS SEQRES 9 B 214 VAL TYR ILE THR GLY TYR LYS TYR VAL PRO ALA ASN ASP SEQRES 10 B 214 GLU ILE SER LEU ILE GLN ALA ILE ALA ASN GLN PRO VAL SEQRES 11 B 214 SER VAL VAL THR ASP SER ARG GLY ARG GLY PHE GLN PHE SEQRES 12 B 214 TYR LYS GLY GLY ILE TYR GLU GLY PRO CYS GLY THR ASN SEQRES 13 B 214 THR ASP HIS ALA VAL THR ALA VAL GLY TYR GLY LYS THR SEQRES 14 B 214 TYR LEU LEU LEU LYS ASN SER TRP GLY PRO ASN TRP GLY SEQRES 15 B 214 GLU LYS GLY TYR ILE ARG ILE LYS ARG ALA SER GLY ARG SEQRES 16 B 214 SER LYS GLY THR CYS GLY VAL TYR THR SER SER PHE PHE SEQRES 17 B 214 PRO ILE LYS GLY TYR ARG SEQRES 1 C 214 TYR PRO GLU SER ILE ASP TRP ARG GLU LYS GLY ALA VAL SEQRES 2 C 214 THR PRO VAL LYS ASN GLN ASN PRO CYS GLY SER CYS TRP SEQRES 3 C 214 ALA PHE SER THR VAL ALA THR ILE GLU GLY ILE ASN LYS SEQRES 4 C 214 ILE ILE THR GLY GLN LEU ILE SER LEU SER GLU GLN GLU SEQRES 5 C 214 LEU LEU ASP CYS GLU ARG ARG SER HIS GLY CYS ASP GLY SEQRES 6 C 214 GLY TYR GLN THR THR SER LEU GLN TYR VAL VAL ASP ASN SEQRES 7 C 214 GLY VAL HIS THR GLU ARG GLU TYR PRO TYR GLU LYS LYS SEQRES 8 C 214 GLN GLY ARG CYS ARG ALA LYS ASP LYS LYS GLY PRO LYS SEQRES 9 C 214 VAL TYR ILE THR GLY TYR LYS TYR VAL PRO ALA ASN ASP SEQRES 10 C 214 GLU ILE SER LEU ILE GLN ALA ILE ALA ASN GLN PRO VAL SEQRES 11 C 214 SER VAL VAL THR ASP SER ARG GLY ARG GLY PHE GLN PHE SEQRES 12 C 214 TYR LYS GLY GLY ILE TYR GLU GLY PRO CYS GLY THR ASN SEQRES 13 C 214 THR ASP HIS ALA VAL THR ALA VAL GLY TYR GLY LYS THR SEQRES 14 C 214 TYR LEU LEU LEU LYS ASN SER TRP GLY PRO ASN TRP GLY SEQRES 15 C 214 GLU LYS GLY TYR ILE ARG ILE LYS ARG ALA SER GLY ARG SEQRES 16 C 214 SER LYS GLY THR CYS GLY VAL TYR THR SER SER PHE PHE SEQRES 17 C 214 PRO ILE LYS GLY TYR ARG SEQRES 1 D 214 TYR PRO GLU SER ILE ASP TRP ARG GLU LYS GLY ALA VAL SEQRES 2 D 214 THR PRO VAL LYS ASN GLN ASN PRO CYS GLY SER CYS TRP SEQRES 3 D 214 ALA PHE SER THR VAL ALA THR ILE GLU GLY ILE ASN LYS SEQRES 4 D 214 ILE ILE THR GLY GLN LEU ILE SER LEU SER GLU GLN GLU SEQRES 5 D 214 LEU LEU ASP CYS GLU ARG ARG SER HIS GLY CYS ASP GLY SEQRES 6 D 214 GLY TYR GLN THR THR SER LEU GLN TYR VAL VAL ASP ASN SEQRES 7 D 214 GLY VAL HIS THR GLU ARG GLU TYR PRO TYR GLU LYS LYS SEQRES 8 D 214 GLN GLY ARG CYS ARG ALA LYS ASP LYS LYS GLY PRO LYS SEQRES 9 D 214 VAL TYR ILE THR GLY TYR LYS TYR VAL PRO ALA ASN ASP SEQRES 10 D 214 GLU ILE SER LEU ILE GLN ALA ILE ALA ASN GLN PRO VAL SEQRES 11 D 214 SER VAL VAL THR ASP SER ARG GLY ARG GLY PHE GLN PHE SEQRES 12 D 214 TYR LYS GLY GLY ILE TYR GLU GLY PRO CYS GLY THR ASN SEQRES 13 D 214 THR ASP HIS ALA VAL THR ALA VAL GLY TYR GLY LYS THR SEQRES 14 D 214 TYR LEU LEU LEU LYS ASN SER TRP GLY PRO ASN TRP GLY SEQRES 15 D 214 GLU LYS GLY TYR ILE ARG ILE LYS ARG ALA SER GLY ARG SEQRES 16 D 214 SER LYS GLY THR CYS GLY VAL TYR THR SER SER PHE PHE SEQRES 17 D 214 PRO ILE LYS GLY TYR ARG HET E64 A 501 25 HET E64 B 502 25 HET E64 C 503 25 HET E64 D 504 25 HETNAM E64 N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO- HETNAM 2 E64 BUTYL]-GUANIDINE FORMUL 5 E64 4(C15 H30 N5 O5 1+) FORMUL 9 HOH *379(H2 O) HELIX 1 1 SER A 24 GLY A 43 1 20 HELIX 2 2 SER A 49 GLU A 57 1 9 HELIX 3 3 HIS A 61 GLY A 65 5 5 HELIX 4 4 TYR A 67 GLY A 79 1 13 HELIX 5 5 ASP A 117 GLN A 128 1 12 HELIX 6 6 GLY A 138 PHE A 143 1 6 HELIX 7 7 GLY A 198 VAL A 202 5 5 HELIX 8 8 SER B 24 GLY B 43 1 20 HELIX 9 9 SER B 49 GLU B 57 1 9 HELIX 10 10 HIS B 61 GLY B 65 5 5 HELIX 11 11 TYR B 67 GLY B 79 1 13 HELIX 12 12 ARG B 96 LYS B 100 5 5 HELIX 13 13 ASP B 117 GLN B 128 1 12 HELIX 14 14 GLY B 138 PHE B 143 1 6 HELIX 15 15 GLY B 198 VAL B 202 5 5 HELIX 16 16 SER C 24 GLY C 43 1 20 HELIX 17 17 SER C 49 GLU C 57 1 9 HELIX 18 18 HIS C 61 GLY C 65 5 5 HELIX 19 19 TYR C 67 GLY C 79 1 13 HELIX 20 20 ASP C 117 GLN C 128 1 12 HELIX 21 21 GLY C 138 PHE C 143 1 6 HELIX 22 22 GLY C 198 VAL C 202 5 5 HELIX 23 23 SER D 24 GLY D 43 1 20 HELIX 24 24 SER D 49 GLU D 57 1 9 HELIX 25 25 HIS D 61 GLY D 65 5 5 HELIX 26 26 TYR D 67 GLY D 79 1 13 HELIX 27 27 ARG D 96 LYS D 100 5 5 HELIX 28 28 ASP D 117 GLN D 128 1 12 HELIX 29 29 GLY D 138 PHE D 143 1 6 HELIX 30 30 GLY D 198 VAL D 202 5 5 SHEET 1 A 3 ILE A 5 ASP A 6 0 SHEET 2 A 3 HIS A 159 TYR A 166 -1 O TYR A 166 N ILE A 5 SHEET 3 A 3 VAL A 130 THR A 134 -1 N VAL A 132 O VAL A 161 SHEET 1 B 5 ILE A 5 ASP A 6 0 SHEET 2 B 5 HIS A 159 TYR A 166 -1 O TYR A 166 N ILE A 5 SHEET 3 B 5 TYR A 170 LYS A 174 -1 O LYS A 174 N THR A 162 SHEET 4 B 5 TYR A 186 LYS A 190 -1 O ILE A 189 N LEU A 171 SHEET 5 B 5 ILE A 148 TYR A 149 1 N TYR A 149 O ARG A 188 SHEET 1 C 2 VAL A 80 HIS A 81 0 SHEET 2 C 2 LYS A 104 VAL A 105 -1 O VAL A 105 N VAL A 80 SHEET 1 D 2 GLY A 109 VAL A 113 0 SHEET 2 D 2 SER A 206 ILE A 210 -1 O ILE A 210 N GLY A 109 SHEET 1 E 3 ILE B 5 ASP B 6 0 SHEET 2 E 3 HIS B 159 TYR B 166 -1 O TYR B 166 N ILE B 5 SHEET 3 E 3 VAL B 130 THR B 134 -1 N VAL B 130 O ALA B 163 SHEET 1 F 5 ILE B 5 ASP B 6 0 SHEET 2 F 5 HIS B 159 TYR B 166 -1 O TYR B 166 N ILE B 5 SHEET 3 F 5 TYR B 170 LYS B 174 -1 O LYS B 174 N THR B 162 SHEET 4 F 5 TYR B 186 LYS B 190 -1 O ILE B 187 N LEU B 173 SHEET 5 F 5 ILE B 148 TYR B 149 1 N TYR B 149 O ARG B 188 SHEET 1 G 2 GLY B 109 TYR B 112 0 SHEET 2 G 2 PHE B 207 ILE B 210 -1 O ILE B 210 N GLY B 109 SHEET 1 H 3 ILE C 5 ASP C 6 0 SHEET 2 H 3 HIS C 159 TYR C 166 -1 O TYR C 166 N ILE C 5 SHEET 3 H 3 VAL C 130 THR C 134 -1 N VAL C 130 O ALA C 163 SHEET 1 I 5 ILE C 5 ASP C 6 0 SHEET 2 I 5 HIS C 159 TYR C 166 -1 O TYR C 166 N ILE C 5 SHEET 3 I 5 TYR C 170 LYS C 174 -1 O LYS C 174 N THR C 162 SHEET 4 I 5 TYR C 186 LYS C 190 -1 O ILE C 189 N LEU C 171 SHEET 5 I 5 ILE C 148 TYR C 149 1 N TYR C 149 O LYS C 190 SHEET 1 J 2 GLY C 109 TYR C 112 0 SHEET 2 J 2 PHE C 207 ILE C 210 -1 O PHE C 208 N LYS C 111 SHEET 1 K 3 ILE D 5 ASP D 6 0 SHEET 2 K 3 HIS D 159 TYR D 166 -1 O TYR D 166 N ILE D 5 SHEET 3 K 3 VAL D 130 THR D 134 -1 N VAL D 130 O ALA D 163 SHEET 1 L 5 ILE D 5 ASP D 6 0 SHEET 2 L 5 HIS D 159 TYR D 166 -1 O TYR D 166 N ILE D 5 SHEET 3 L 5 TYR D 170 LYS D 174 -1 O LYS D 174 N THR D 162 SHEET 4 L 5 TYR D 186 LYS D 190 -1 O ILE D 187 N LEU D 173 SHEET 5 L 5 ILE D 148 TYR D 149 1 N TYR D 149 O ARG D 188 SHEET 1 M 2 GLY D 109 TYR D 112 0 SHEET 2 M 2 PHE D 207 ILE D 210 -1 O ILE D 210 N GLY D 109 SSBOND 1 CYS A 22 CYS A 63 1555 1555 2.02 SSBOND 2 CYS A 56 CYS A 95 1555 1555 2.02 SSBOND 3 CYS A 153 CYS A 200 1555 1555 2.02 SSBOND 4 CYS B 22 CYS B 63 1555 1555 2.03 SSBOND 5 CYS B 56 CYS B 95 1555 1555 2.05 SSBOND 6 CYS B 153 CYS B 200 1555 1555 2.03 SSBOND 7 CYS C 22 CYS C 63 1555 1555 2.00 SSBOND 8 CYS C 56 CYS C 95 1555 1555 2.03 SSBOND 9 CYS C 153 CYS C 200 1555 1555 2.06 SSBOND 10 CYS D 22 CYS D 63 1555 1555 2.03 SSBOND 11 CYS D 56 CYS D 95 1555 1555 2.04 SSBOND 12 CYS D 153 CYS D 200 1555 1555 2.05 LINK C2 E64 A 501 SG CYS A 25 1555 1555 2.33 LINK C2 E64 B 502 SG CYS B 25 1555 1555 2.08 LINK C2 E64 C 503 SG CYS C 25 1555 1555 2.28 LINK C2 E64 D 504 SG CYS D 25 1555 1555 2.14 CISPEP 1 ASN A 20 PRO A 21 0 3.27 CISPEP 2 GLY A 151 PRO A 152 0 1.51 CISPEP 3 ASN B 20 PRO B 21 0 0.22 CISPEP 4 GLY B 151 PRO B 152 0 3.65 CISPEP 5 ASN C 20 PRO C 21 0 1.12 CISPEP 6 GLY C 151 PRO C 152 0 4.49 CISPEP 7 ASN D 20 PRO D 21 0 0.07 CISPEP 8 GLY D 151 PRO D 152 0 -3.42 SITE 1 AC1 18 GLN A 19 GLY A 23 SER A 24 CYS A 25 SITE 2 AC1 18 TRP A 26 ASP A 64 GLY A 65 GLY A 66 SITE 3 AC1 18 VAL A 133 THR A 157 ASP A 158 HIS A 159 SITE 4 AC1 18 HOH A1101 HOH A1132 HOH A1371 ASN B 180 SITE 5 AC1 18 GLN D 92 GLY D 93 SITE 1 AC2 15 ASN A 180 GLN B 19 GLY B 23 SER B 24 SITE 2 AC2 15 CYS B 25 TRP B 26 ASP B 64 GLY B 65 SITE 3 AC2 15 GLY B 66 THR B 157 ASP B 158 HIS B 159 SITE 4 AC2 15 HOH B1018 HOH B1310 HOH B1372 SITE 1 AC3 13 GLN C 19 GLY C 23 SER C 24 CYS C 25 SITE 2 AC3 13 TRP C 26 ASP C 64 GLY C 65 GLY C 66 SITE 3 AC3 13 ASP C 158 HIS C 159 HOH C1068 HOH C1258 SITE 4 AC3 13 HOH C1347 SITE 1 AC4 17 LYS A 91 GLN A 92 GLY A 93 GLN D 19 SITE 2 AC4 17 GLY D 23 SER D 24 CYS D 25 TRP D 26 SITE 3 AC4 17 ASP D 64 GLY D 65 GLY D 66 VAL D 133 SITE 4 AC4 17 THR D 157 ASP D 158 HIS D 159 HOH D1040 SITE 5 AC4 17 HOH D1160 CRYST1 57.356 90.454 80.391 90.00 92.64 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017430 0.000000 0.000800 0.00000 SCALE2 0.000000 0.011060 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012450 0.00000 MASTER 374 0 4 30 42 0 18 6 0 0 0 68 END