HEADER ISOMERASE/STRUCTURAL PROTEIN 29-AUG-05 2AUS TITLE CRYSTAL STRUCTURE OF THE ARCHAEAL BOX H/ACA SRNP NOP10-CBF5 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PSEUDOURIDINE SYNTHASE; COMPND 3 CHAIN: C, A; COMPND 4 SYNONYM: PROBABLE TRNA PSEUDOURIDINE SYNTHASE B, CBF5, TRNA COMPND 5 PSEUDOURIDINE 55 SYNTHASE, PSI55 SYNTHASE, TRNA-URIDINE ISOMERASE, COMPND 6 TRNA PSEUDOURIDYLATE SYNTHASE; COMPND 7 EC: 5.4.99.-; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: RIBOSOME BIOGENESIS PROTEIN NOP10; COMPND 11 CHAIN: D, B; COMPND 12 SYNONYM: NOP10; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS ABYSSI; SOURCE 3 ORGANISM_TAXID: 29292; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PGEX-6P1; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: PYROCOCCUS ABYSSI; SOURCE 10 ORGANISM_TAXID: 29292; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 13 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 14 EXPRESSION_SYSTEM_PLASMID: PGEX-6P1 KEYWDS ISOMERASE, STRUCTURAL PROTEIN, ISOMERASE-STRUCTURAL PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.CHARRON,X.MANIVAL,B.CHARPENTIER,J.-B.FOURMANN,F.GODARD,C.BRANLANT REVDAT 4 11-OCT-17 2AUS 1 REMARK REVDAT 3 13-JUL-11 2AUS 1 VERSN REVDAT 2 24-FEB-09 2AUS 1 VERSN REVDAT 1 11-JUL-06 2AUS 0 JRNL AUTH X.MANIVAL,C.CHARRON,J.B.FOURMANN,F.GODARD,B.CHARPENTIER, JRNL AUTH 2 C.BRANLANT JRNL TITL CRYSTAL STRUCTURE DETERMINATION AND SITE-DIRECTED JRNL TITL 2 MUTAGENESIS OF THE PYROCOCCUS ABYSSI ACBF5-ANOP10 COMPLEX JRNL TITL 3 REVEAL CRUCIAL ROLES OF THE C-TERMINAL DOMAINS OF BOTH JRNL TITL 4 PROTEINS IN H/ACA SRNP ACTIVITY JRNL REF NUCLEIC ACIDS RES. V. 34 826 2006 JRNL REFN ISSN 0305-1048 JRNL PMID 16456033 JRNL DOI 10.1093/NAR/GKJ482 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 65534 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 3334 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5776 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 250 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.491 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2AUS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-AUG-05. REMARK 100 THE DEPOSITION ID IS D_1000034337. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-SEP-04; 14-FEB-05 REMARK 200 TEMPERATURE (KELVIN) : 100.0; 100.0 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : ESRF; ESRF REMARK 200 BEAMLINE : ID14-4; BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9686; 0.9777 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4; MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65534 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06800 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: POTASSIUM PHOSPHATE, SODIUM ACETATE, REMARK 280 PH 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 68.21500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 68.41000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 68.21500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 68.41000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A TETRAMER GENERATED FROM THE REMARK 300 HETERODIMER IN THE ASYMMETRIC UNIT BY THE OPERATION: -X, -Y, Z. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 136.82000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -78.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 136.43000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 136.82000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 ARG C 3 REMARK 465 ASP C 4 REMARK 465 GLU C 5 REMARK 465 VAL C 6 REMARK 465 ARG C 7 REMARK 465 ARG C 8 REMARK 465 ILE C 9 REMARK 465 LEU C 10 REMARK 465 PRO C 11 REMARK 465 ARG C 139 REMARK 465 PRO C 140 REMARK 465 PRO C 141 REMARK 465 LEU C 142 REMARK 465 ARG C 143 REMARK 465 SER C 144 REMARK 465 ALA C 145 REMARK 465 VAL C 146 REMARK 465 LYS C 147 REMARK 465 ARG C 148 REMARK 465 ARG C 149 REMARK 465 LEU C 150 REMARK 465 MET D 1 REMARK 465 ARG D 2 REMARK 465 PHE D 3 REMARK 465 ARG D 57 REMARK 465 LYS D 58 REMARK 465 GLU D 59 REMARK 465 LYS D 60 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ARG A 3 REMARK 465 ASP A 4 REMARK 465 GLU A 5 REMARK 465 VAL A 6 REMARK 465 ARG A 7 REMARK 465 ARG A 8 REMARK 465 ILE A 9 REMARK 465 LEU A 10 REMARK 465 PRO A 11 REMARK 465 ARG A 139 REMARK 465 PRO A 140 REMARK 465 PRO A 141 REMARK 465 LEU A 142 REMARK 465 ARG A 143 REMARK 465 SER A 144 REMARK 465 ALA A 145 REMARK 465 VAL A 146 REMARK 465 LYS A 147 REMARK 465 ARG A 148 REMARK 465 ARG A 149 REMARK 465 LEU A 150 REMARK 465 ARG A 151 REMARK 465 THR A 152 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 PHE B 3 REMARK 465 ARG B 57 REMARK 465 LYS B 58 REMARK 465 GLU B 59 REMARK 465 LYS B 60 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU C 94 -115.43 39.90 REMARK 500 LYS C 283 133.02 -39.92 REMARK 500 LYS D 10 -92.43 -81.26 REMARK 500 ASP A 13 43.08 -79.49 REMARK 500 GLU A 94 -114.69 43.02 REMARK 500 ASP A 211 -157.87 -127.73 REMARK 500 LYS B 10 -78.68 -75.70 REMARK 500 VAL B 22 -78.47 -72.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1070 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 11 SG REMARK 620 2 CYS B 20 SG 118.4 REMARK 620 3 CYS B 8 SG 108.1 91.4 REMARK 620 4 CYS B 23 SG 132.2 107.7 81.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D1071 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 11 SG REMARK 620 2 CYS D 20 SG 103.6 REMARK 620 3 CYS D 8 SG 132.9 93.0 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1070 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 1071 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 D 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 C 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 1006 DBREF 2AUS C 1 334 UNP Q9V1A5 TRUB_PYRAB 1 334 DBREF 2AUS D 1 60 UNP Q9V0E3 NOP10_PYRAB 1 60 DBREF 2AUS A 1 334 UNP Q9V1A5 TRUB_PYRAB 1 334 DBREF 2AUS B 1 60 UNP Q9V0E3 NOP10_PYRAB 1 60 SEQRES 1 C 334 MET ALA ARG ASP GLU VAL ARG ARG ILE LEU PRO ALA ASP SEQRES 2 C 334 ILE LYS ARG GLU VAL ILE VAL LYS ASP ASP LYS ALA GLU SEQRES 3 C 334 THR ASN PRO LYS TRP GLY PHE PRO PRO ASP LYS ARG PRO SEQRES 4 C 334 ILE GLU LEU HIS ILE GLN TYR GLY VAL ILE ASN LEU ASP SEQRES 5 C 334 LYS PRO PRO GLY PRO THR SER HIS GLU VAL VAL ALA TRP SEQRES 6 C 334 ILE LYS ARG ILE LEU ASN LEU GLU LYS ALA GLY HIS GLY SEQRES 7 C 334 GLY THR LEU ASP PRO LYS VAL SER GLY VAL LEU PRO VAL SEQRES 8 C 334 ALA LEU GLU ARG ALA THR ARG VAL VAL GLN ALA LEU LEU SEQRES 9 C 334 PRO ALA GLY LYS GLU TYR VAL ALA LEU MET HIS LEU HIS SEQRES 10 C 334 GLY ASP VAL PRO GLU ASP LYS ILE ARG ALA VAL MET LYS SEQRES 11 C 334 GLU PHE GLU GLY GLU ILE ILE GLN ARG PRO PRO LEU ARG SEQRES 12 C 334 SER ALA VAL LYS ARG ARG LEU ARG THR ARG LYS VAL TYR SEQRES 13 C 334 TYR ILE GLU ILE LEU GLU ILE ASP GLY ARG ASP VAL LEU SEQRES 14 C 334 PHE ARG VAL GLY VAL GLU ALA GLY THR TYR ILE ARG SER SEQRES 15 C 334 LEU ILE HIS HIS ILE GLY LEU ALA LEU GLY VAL GLY ALA SEQRES 16 C 334 HIS MET ALA GLU LEU ARG ARG THR ARG SER GLY PRO PHE SEQRES 17 C 334 LYS GLU ASP GLU THR LEU VAL THR LEU HIS ASP LEU VAL SEQRES 18 C 334 ASP TYR TYR HIS PHE TRP LYS GLU ASP GLY ILE GLU GLU SEQRES 19 C 334 TYR ILE ARG LYS ALA ILE GLN PRO MET GLU LYS ALA VAL SEQRES 20 C 334 GLU HIS LEU PRO LYS ILE TRP ILE LYS ASP SER ALA VAL SEQRES 21 C 334 ALA ALA VAL ALA HIS GLY ALA ASN LEU THR VAL PRO GLY SEQRES 22 C 334 ILE VAL LYS LEU ASN ALA GLY ILE LYS LYS GLY ASP LEU SEQRES 23 C 334 VAL ALA ILE MET THR LEU LYS ASP GLU LEU VAL ALA LEU SEQRES 24 C 334 GLY LYS ALA MET MET SER THR GLN GLU MET ILE GLU ARG SEQRES 25 C 334 SER LYS GLY ILE ALA VAL ASP VAL GLU LYS VAL PHE MET SEQRES 26 C 334 PRO ARG ASP TRP TYR PRO LYS LEU TRP SEQRES 1 D 60 MET ARG PHE ARG ILE ARG LYS CYS PRO LYS CYS GLY ARG SEQRES 2 D 60 TYR THR LEU LYS GLU THR CYS PRO VAL CYS GLY GLU LYS SEQRES 3 D 60 THR LYS VAL ALA HIS PRO PRO ARG PHE SER PRO GLU ASP SEQRES 4 D 60 PRO TYR GLY GLU TYR ARG ARG ARG LEU LYS ARG GLU LEU SEQRES 5 D 60 LEU GLY ILE GLY ARG LYS GLU LYS SEQRES 1 A 334 MET ALA ARG ASP GLU VAL ARG ARG ILE LEU PRO ALA ASP SEQRES 2 A 334 ILE LYS ARG GLU VAL ILE VAL LYS ASP ASP LYS ALA GLU SEQRES 3 A 334 THR ASN PRO LYS TRP GLY PHE PRO PRO ASP LYS ARG PRO SEQRES 4 A 334 ILE GLU LEU HIS ILE GLN TYR GLY VAL ILE ASN LEU ASP SEQRES 5 A 334 LYS PRO PRO GLY PRO THR SER HIS GLU VAL VAL ALA TRP SEQRES 6 A 334 ILE LYS ARG ILE LEU ASN LEU GLU LYS ALA GLY HIS GLY SEQRES 7 A 334 GLY THR LEU ASP PRO LYS VAL SER GLY VAL LEU PRO VAL SEQRES 8 A 334 ALA LEU GLU ARG ALA THR ARG VAL VAL GLN ALA LEU LEU SEQRES 9 A 334 PRO ALA GLY LYS GLU TYR VAL ALA LEU MET HIS LEU HIS SEQRES 10 A 334 GLY ASP VAL PRO GLU ASP LYS ILE ARG ALA VAL MET LYS SEQRES 11 A 334 GLU PHE GLU GLY GLU ILE ILE GLN ARG PRO PRO LEU ARG SEQRES 12 A 334 SER ALA VAL LYS ARG ARG LEU ARG THR ARG LYS VAL TYR SEQRES 13 A 334 TYR ILE GLU ILE LEU GLU ILE ASP GLY ARG ASP VAL LEU SEQRES 14 A 334 PHE ARG VAL GLY VAL GLU ALA GLY THR TYR ILE ARG SER SEQRES 15 A 334 LEU ILE HIS HIS ILE GLY LEU ALA LEU GLY VAL GLY ALA SEQRES 16 A 334 HIS MET ALA GLU LEU ARG ARG THR ARG SER GLY PRO PHE SEQRES 17 A 334 LYS GLU ASP GLU THR LEU VAL THR LEU HIS ASP LEU VAL SEQRES 18 A 334 ASP TYR TYR HIS PHE TRP LYS GLU ASP GLY ILE GLU GLU SEQRES 19 A 334 TYR ILE ARG LYS ALA ILE GLN PRO MET GLU LYS ALA VAL SEQRES 20 A 334 GLU HIS LEU PRO LYS ILE TRP ILE LYS ASP SER ALA VAL SEQRES 21 A 334 ALA ALA VAL ALA HIS GLY ALA ASN LEU THR VAL PRO GLY SEQRES 22 A 334 ILE VAL LYS LEU ASN ALA GLY ILE LYS LYS GLY ASP LEU SEQRES 23 A 334 VAL ALA ILE MET THR LEU LYS ASP GLU LEU VAL ALA LEU SEQRES 24 A 334 GLY LYS ALA MET MET SER THR GLN GLU MET ILE GLU ARG SEQRES 25 A 334 SER LYS GLY ILE ALA VAL ASP VAL GLU LYS VAL PHE MET SEQRES 26 A 334 PRO ARG ASP TRP TYR PRO LYS LEU TRP SEQRES 1 B 60 MET ARG PHE ARG ILE ARG LYS CYS PRO LYS CYS GLY ARG SEQRES 2 B 60 TYR THR LEU LYS GLU THR CYS PRO VAL CYS GLY GLU LYS SEQRES 3 B 60 THR LYS VAL ALA HIS PRO PRO ARG PHE SER PRO GLU ASP SEQRES 4 B 60 PRO TYR GLY GLU TYR ARG ARG ARG LEU LYS ARG GLU LEU SEQRES 5 B 60 LEU GLY ILE GLY ARG LYS GLU LYS HET PO4 C1004 5 HET ZN D1071 1 HET PO4 D1001 5 HET PO4 A1003 5 HET ZN B1070 1 HET PO4 B1002 5 HET PO4 B1006 5 HETNAM PO4 PHOSPHATE ION HETNAM ZN ZINC ION FORMUL 5 PO4 5(O4 P 3-) FORMUL 6 ZN 2(ZN 2+) FORMUL 12 HOH *250(H2 O) HELIX 1 1 PRO C 34 ARG C 38 5 5 HELIX 2 2 PRO C 39 TYR C 46 1 8 HELIX 3 3 THR C 58 LEU C 70 1 13 HELIX 4 4 ARG C 95 LEU C 104 5 10 HELIX 5 5 PRO C 121 PHE C 132 1 12 HELIX 6 6 TYR C 179 GLY C 192 1 14 HELIX 7 7 THR C 216 GLU C 229 1 14 HELIX 8 8 GLU C 233 ILE C 240 1 8 HELIX 9 9 GLU C 244 GLU C 248 5 5 HELIX 10 10 LYS C 256 HIS C 265 1 10 HELIX 11 11 SER C 305 ARG C 312 1 8 HELIX 12 12 TYR D 41 LEU D 53 1 13 HELIX 13 13 PRO A 34 ARG A 38 5 5 HELIX 14 14 PRO A 39 TYR A 46 1 8 HELIX 15 15 THR A 58 LEU A 70 1 13 HELIX 16 16 ARG A 95 LEU A 104 5 10 HELIX 17 17 PRO A 121 PHE A 132 1 12 HELIX 18 18 TYR A 179 LEU A 191 1 13 HELIX 19 19 THR A 216 GLU A 229 1 14 HELIX 20 20 GLU A 233 ILE A 240 1 8 HELIX 21 21 GLU A 244 GLU A 248 5 5 HELIX 22 22 LYS A 256 HIS A 265 1 10 HELIX 23 23 SER A 305 ARG A 312 1 8 HELIX 24 24 TYR B 41 GLY B 54 1 14 SHEET 1 A14 LEU C 269 THR C 270 0 SHEET 2 A14 ILE C 316 VAL C 323 -1 N ALA C 317 O LEU C 269 SHEET 3 A14 LEU C 296 ALA C 302 -1 N LEU C 299 O LYS C 322 SHEET 4 A14 LEU C 286 THR C 291 -1 N VAL C 287 O GLY C 300 SHEET 5 A14 LYS C 252 ILE C 255 1 O ILE C 253 N MET C 290 SHEET 6 A14 ILE C 274 ASN C 278 -1 N VAL C 275 O TRP C 254 SHEET 7 A14 VAL C 18 VAL C 20 -1 N ILE C 19 O LEU C 277 SHEET 8 A14 VAL A 18 VAL A 20 1 O VAL A 18 N VAL C 18 SHEET 9 A14 ILE A 274 ASN A 278 -1 O LEU A 277 N ILE A 19 SHEET 10 A14 LYS A 252 ILE A 255 -1 O LYS A 252 N ASN A 278 SHEET 11 A14 LEU A 286 MET A 290 1 O ALA A 288 N ILE A 253 SHEET 12 A14 LEU A 296 ALA A 302 -1 N VAL A 297 O ILE A 289 SHEET 13 A14 ILE A 316 VAL A 323 -1 N ASP A 319 O LYS A 301 SHEET 14 A14 LEU A 269 THR A 270 -1 O LEU A 269 N ALA A 317 SHEET 1 B14 GLY C 134 ILE C 137 0 SHEET 2 B14 THR C 152 ASP C 164 -1 N ARG C 153 O ILE C 136 SHEET 3 B14 ASP C 167 VAL C 174 -1 O ASP C 167 N ASP C 164 SHEET 4 B14 LYS C 108 LEU C 116 -1 O LYS C 108 N VAL C 174 SHEET 5 B14 ALA C 195 SER C 205 -1 O HIS C 196 N HIS C 115 SHEET 6 B14 PHE C 208 LYS C 209 -1 O PHE C 208 N SER C 205 SHEET 7 B14 ALA C 195 SER C 205 -1 N SER C 205 O PHE C 208 SHEET 8 B14 SER C 86 LEU C 93 1 O SER C 86 N ARG C 202 SHEET 9 B14 ALA C 75 HIS C 77 -1 O GLY C 76 N ALA C 92 SHEET 10 B14 SER C 86 LEU C 93 -1 N ALA C 92 O GLY C 76 SHEET 11 B14 GLY C 47 LYS C 53 -1 O GLY C 47 N LEU C 93 SHEET 12 B14 GLN C 241 PRO C 242 -1 N GLN C 241 O VAL C 48 SHEET 13 B14 GLY C 47 LYS C 53 -1 O VAL C 48 N GLN C 241 SHEET 14 B14 LEU C 214 VAL C 215 1 O VAL C 215 N ASP C 52 SHEET 1 C 3 TYR D 14 THR D 15 0 SHEET 2 C 3 ARG D 6 LYS D 7 -1 O ARG D 6 N THR D 15 SHEET 3 C 3 LYS D 28 VAL D 29 -1 O LYS D 28 N LYS D 7 SHEET 1 D14 GLY A 134 GLU A 135 0 SHEET 2 D14 LYS A 154 ASP A 164 -1 O VAL A 155 N GLY A 134 SHEET 3 D14 ASP A 167 GLU A 175 -1 O ASP A 167 N ASP A 164 SHEET 4 D14 GLY A 107 LEU A 116 -1 O LYS A 108 N VAL A 174 SHEET 5 D14 ALA A 195 SER A 205 -1 O HIS A 196 N HIS A 115 SHEET 6 D14 PHE A 208 LYS A 209 -1 O PHE A 208 N SER A 205 SHEET 7 D14 ALA A 195 SER A 205 -1 N SER A 205 O PHE A 208 SHEET 8 D14 SER A 86 LEU A 93 1 O SER A 86 N ARG A 202 SHEET 9 D14 ALA A 75 HIS A 77 -1 O GLY A 76 N ALA A 92 SHEET 10 D14 SER A 86 LEU A 93 -1 N ALA A 92 O GLY A 76 SHEET 11 D14 GLY A 47 LYS A 53 -1 O GLY A 47 N LEU A 93 SHEET 12 D14 GLN A 241 PRO A 242 -1 N GLN A 241 O VAL A 48 SHEET 13 D14 GLY A 47 LYS A 53 -1 O VAL A 48 N GLN A 241 SHEET 14 D14 LEU A 214 VAL A 215 1 O VAL A 215 N ASP A 52 SHEET 1 E 3 TYR B 14 THR B 15 0 SHEET 2 E 3 ARG B 6 LYS B 7 -1 N ARG B 6 O THR B 15 SHEET 3 E 3 LYS B 28 VAL B 29 -1 O LYS B 28 N LYS B 7 LINK ZN ZN B1070 SG CYS B 11 1555 1555 2.17 LINK ZN ZN B1070 SG CYS B 20 1555 1555 2.35 LINK ZN ZN B1070 SG CYS B 8 1555 1555 2.46 LINK ZN ZN B1070 SG CYS B 23 1555 1555 2.74 LINK ZN ZN D1071 SG CYS D 11 1555 1555 2.45 LINK ZN ZN D1071 SG CYS D 20 1555 1555 2.75 LINK ZN ZN D1071 SG CYS D 8 1555 1555 2.42 SITE 1 AC1 4 CYS B 8 CYS B 11 CYS B 20 CYS B 23 SITE 1 AC2 4 CYS D 8 CYS D 11 CYS D 20 CYS D 23 SITE 1 AC3 5 GLU C 229 GLU D 43 ARG D 46 ARG D 50 SITE 2 AC3 5 HOH D 140 SITE 1 AC4 6 HIS A 225 GLU A 229 GLU B 43 ARG B 46 SITE 2 AC4 6 ARG B 50 HOH B1083 SITE 1 AC5 8 GLY A 79 THR A 80 LYS A 108 ALA A 176 SITE 2 AC5 8 GLY A 177 ARG A 202 HOH A1022 HOH A1073 SITE 1 AC6 4 LYS C 108 TYR C 110 GLY C 177 ARG C 202 SITE 1 AC7 7 HIS A 218 ARG B 34 SER B 36 ASP B 39 SITE 2 AC7 7 PRO B 40 HOH B1072 HOH B1076 CRYST1 136.430 136.820 59.340 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007330 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007309 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016852 0.00000 MASTER 404 0 7 24 48 0 11 6 0 0 0 62 END