HEADER TRANSFERASE 14-JUL-05 2AB6 TITLE HUMAN GLUTATHIONE S-TRANSFERASE M2-2 (E.C.2.5.1.18) COMPLEXED WITH S- TITLE 2 METHYLGLUTATHIONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE MU 2; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: GSTM2-2, GST CLASS-MU 2; COMPND 5 EC: 2.5.1.18; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GSTM2, GST4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET3A-GSTM2 KEYWDS TRANSFERASE, S-METHYLGLUTATHIONE, CONJUGATION, DETOXIFICATION EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,S.C.ALMO,I.LISTOWSKY REVDAT 3 11-OCT-17 2AB6 1 REMARK REVDAT 2 24-FEB-09 2AB6 1 VERSN REVDAT 1 02-AUG-05 2AB6 0 JRNL AUTH Y.PATSKOVSKY,L.PATSKOVSKA,S.C.ALMO,I.LISTOWSKY JRNL TITL STRUCTURAL PERTURBATIONS IN THE ACTIVE SITE OF HUMAN JRNL TITL 2 GLUTATHIONE-S-TRANSFERASE M2-2 UPON LIGAND BINDING JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH L.N.PATSKOVSKA,A.A.FEDOROV,Y.V.PATSKOVSKY,S.C.ALMO, REMARK 1 AUTH 2 I.LISTOWSKY REMARK 1 TITL EXPRESSION, CRYSTALLIZATION AND PRELIMINARY X-RAY ANALYSIS REMARK 1 TITL 2 OF LIGAND-FREE HUMAN GLUTATHIONE S-TRANSFERASE M2-2 REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 54 458 1998 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 9761928 REMARK 1 DOI 10.1107/S0907444997011190 REMARK 1 REFERENCE 2 REMARK 1 AUTH S.RAGHUNATHAN,R.J.CHANDROSS,R.H.KRETSINGER,T.J.ALLISON, REMARK 1 AUTH 2 C.J.PENINGTON,G.S.RULE REMARK 1 TITL CRYSTAL STRUCTURE OF HUMAN CLASS MU GLUTATHIONE TRANSFERASE REMARK 1 TITL 2 GSTM2-2. EFFECTS OF LATTICE PACKING ON CONFORMATIONAL REMARK 1 TITL 3 HETEROGENEITY REMARK 1 REF J.MOL.BIOL. V. 238 815 1994 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 8182750 REMARK 1 DOI 10.1006/JMBI.1994.1336 REMARK 1 REFERENCE 3 REMARK 1 AUTH W.R.VORACHEK,W.R.PEARSON,G.S.RULE REMARK 1 TITL CLONING, EXPRESSION, AND CHARACTERIZATION OF A CLASS-MU REMARK 1 TITL 2 GLUTATHIONE TRANSFERASE FROM HUMAN MUSCLE, THE PRODUCT OF REMARK 1 TITL 3 THE GST4 LOCUS REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 88 4443 1991 REMARK 1 REFN ISSN 0027-8424 REMARK 1 PMID 2034681 REMARK 1 DOI 10.1073/PNAS.88.10.4443 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.5 REMARK 3 NUMBER OF REFLECTIONS : 27393 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200 REMARK 3 FREE R VALUE TEST SET COUNT : 903 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1541 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 67.24 REMARK 3 BIN R VALUE (WORKING SET) : 0.3490 REMARK 3 BIN FREE R VALUE SET COUNT : 54 REMARK 3 BIN FREE R VALUE : 0.4340 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7228 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 84 REMARK 3 SOLVENT ATOMS : 203 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.41000 REMARK 3 B22 (A**2) : 0.61000 REMARK 3 B33 (A**2) : 0.80000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.388 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.308 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.608 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.875 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.814 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7500 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10108 ; 1.226 ; 1.983 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 864 ; 7.008 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 372 ;38.334 ;24.086 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1356 ;19.061 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 44 ;22.104 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1040 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5732 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3540 ; 0.186 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 5126 ; 0.315 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 514 ; 0.182 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 96 ; 0.330 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.367 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4438 ; 1.493 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7016 ; 2.405 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3470 ; 1.661 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3092 ; 2.742 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 217 1 REMARK 3 1 B 1 B 217 1 REMARK 3 1 C 1 C 217 1 REMARK 3 1 D 1 D 217 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 1828 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 1828 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 C (A): 1828 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 D (A): 1828 ; 0.05 ; 0.05 REMARK 3 TIGHT THERMAL 1 A (A**2): 1828 ; 0.10 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 1828 ; 0.09 ; 0.50 REMARK 3 TIGHT THERMAL 1 C (A**2): 1828 ; 0.09 ; 0.50 REMARK 3 TIGHT THERMAL 1 D (A**2): 1828 ; 0.10 ; 0.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2AB6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JUL-05. REMARK 100 THE DEPOSITION ID IS D_1000033703. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-OCT-04 REMARK 200 TEMPERATURE (KELVIN) : 90.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : R-AXIS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28327 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.5 REMARK 200 DATA REDUNDANCY : 11.70 REMARK 200 R MERGE (I) : 0.13400 REMARK 200 R SYM (I) : 0.13000 REMARK 200 FOR THE DATA SET : 3.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.33000 REMARK 200 R SYM FOR SHELL (I) : 0.41000 REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CCP4 REMARK 200 STARTING MODEL: PDB ENTRY 2GTU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 4000, PH 6.50, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.06000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 106.22450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.35800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 106.22450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.06000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.35800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A HOMODIMER COMPOSED OF TWO REMARK 300 IDENTICAL MONOMERS. THE ASYMMETRIC UNIT CONTAINS TWO HOMODIMERS, REMARK 300 COMPOSED OF CHAINS A/B AND C/D, RESPECTIVELY. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 42 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG A 42 NE - CZ - NH2 ANGL. DEV. = -5.1 DEGREES REMARK 500 ARG A 186 NE - CZ - NH1 ANGL. DEV. = -5.7 DEGREES REMARK 500 ARG A 186 NE - CZ - NH2 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG B 42 NE - CZ - NH1 ANGL. DEV. = -5.3 DEGREES REMARK 500 ARG B 42 NE - CZ - NH2 ANGL. DEV. = 5.1 DEGREES REMARK 500 ARG B 186 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 186 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ARG B 201 NE - CZ - NH1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG B 201 NE - CZ - NH2 ANGL. DEV. = -5.1 DEGREES REMARK 500 ARG C 42 NE - CZ - NH1 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG C 42 NE - CZ - NH2 ANGL. DEV. = -4.8 DEGREES REMARK 500 ARG C 186 NE - CZ - NH1 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG C 186 NE - CZ - NH2 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG C 201 NE - CZ - NH1 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG C 201 NE - CZ - NH2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG D 42 NE - CZ - NH1 ANGL. DEV. = -5.2 DEGREES REMARK 500 ARG D 42 NE - CZ - NH2 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG D 186 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 ARG D 186 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG D 201 NE - CZ - NH1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG D 201 NE - CZ - NH2 ANGL. DEV. = -5.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 8 45.38 -76.60 REMARK 500 ARG A 10 -73.72 -59.17 REMARK 500 GLN A 71 115.38 67.87 REMARK 500 ASP A 118 32.01 -82.05 REMARK 500 PHE A 202 128.79 -39.74 REMARK 500 ASN B 8 46.08 -77.52 REMARK 500 GLN B 71 119.39 68.65 REMARK 500 ASP B 118 34.75 -86.88 REMARK 500 ASN C 8 47.25 -80.58 REMARK 500 ARG C 10 -76.17 -57.38 REMARK 500 GLN C 71 116.76 70.15 REMARK 500 ASP C 118 36.07 -84.61 REMARK 500 ASN D 8 49.44 -79.05 REMARK 500 ARG D 10 -75.76 -60.32 REMARK 500 ASP D 64 75.98 -119.63 REMARK 500 GLN D 71 118.20 66.45 REMARK 500 ASP D 118 33.27 -83.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSM A 1218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSM B 2218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSM C 3218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSM D 4218 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1GTU RELATED DB: PDB REMARK 900 LIGAND-FREE HUMAN GSTM2-2 REMARK 900 RELATED ID: 1XW5 RELATED DB: PDB REMARK 900 HUMAN GSTM2-2 COMPLEXED WITH GLUTATHIONE DBREF 2AB6 A 1 217 UNP P28161 GSTM2_HUMAN 1 217 DBREF 2AB6 B 1 217 UNP P28161 GSTM2_HUMAN 1 217 DBREF 2AB6 C 1 217 UNP P28161 GSTM2_HUMAN 1 217 DBREF 2AB6 D 1 217 UNP P28161 GSTM2_HUMAN 1 217 SEQRES 1 A 217 PRO MET THR LEU GLY TYR TRP ASN ILE ARG GLY LEU ALA SEQRES 2 A 217 HIS SER ILE ARG LEU LEU LEU GLU TYR THR ASP SER SER SEQRES 3 A 217 TYR GLU GLU LYS LYS TYR THR MET GLY ASP ALA PRO ASP SEQRES 4 A 217 TYR ASP ARG SER GLN TRP LEU ASN GLU LYS PHE LYS LEU SEQRES 5 A 217 GLY LEU ASP PHE PRO ASN LEU PRO TYR LEU ILE ASP GLY SEQRES 6 A 217 THR HIS LYS ILE THR GLN SER ASN ALA ILE LEU ARG TYR SEQRES 7 A 217 ILE ALA ARG LYS HIS ASN LEU CYS GLY GLU SER GLU LYS SEQRES 8 A 217 GLU GLN ILE ARG GLU ASP ILE LEU GLU ASN GLN PHE MET SEQRES 9 A 217 ASP SER ARG MET GLN LEU ALA LYS LEU CYS TYR ASP PRO SEQRES 10 A 217 ASP PHE GLU LYS LEU LYS PRO GLU TYR LEU GLN ALA LEU SEQRES 11 A 217 PRO GLU MET LEU LYS LEU TYR SER GLN PHE LEU GLY LYS SEQRES 12 A 217 GLN PRO TRP PHE LEU GLY ASP LYS ILE THR PHE VAL ASP SEQRES 13 A 217 PHE ILE ALA TYR ASP VAL LEU GLU ARG ASN GLN VAL PHE SEQRES 14 A 217 GLU PRO SER CYS LEU ASP ALA PHE PRO ASN LEU LYS ASP SEQRES 15 A 217 PHE ILE SER ARG PHE GLU GLY LEU GLU LYS ILE SER ALA SEQRES 16 A 217 TYR MET LYS SER SER ARG PHE LEU PRO ARG PRO VAL PHE SEQRES 17 A 217 THR LYS MET ALA VAL TRP GLY ASN LYS SEQRES 1 B 217 PRO MET THR LEU GLY TYR TRP ASN ILE ARG GLY LEU ALA SEQRES 2 B 217 HIS SER ILE ARG LEU LEU LEU GLU TYR THR ASP SER SER SEQRES 3 B 217 TYR GLU GLU LYS LYS TYR THR MET GLY ASP ALA PRO ASP SEQRES 4 B 217 TYR ASP ARG SER GLN TRP LEU ASN GLU LYS PHE LYS LEU SEQRES 5 B 217 GLY LEU ASP PHE PRO ASN LEU PRO TYR LEU ILE ASP GLY SEQRES 6 B 217 THR HIS LYS ILE THR GLN SER ASN ALA ILE LEU ARG TYR SEQRES 7 B 217 ILE ALA ARG LYS HIS ASN LEU CYS GLY GLU SER GLU LYS SEQRES 8 B 217 GLU GLN ILE ARG GLU ASP ILE LEU GLU ASN GLN PHE MET SEQRES 9 B 217 ASP SER ARG MET GLN LEU ALA LYS LEU CYS TYR ASP PRO SEQRES 10 B 217 ASP PHE GLU LYS LEU LYS PRO GLU TYR LEU GLN ALA LEU SEQRES 11 B 217 PRO GLU MET LEU LYS LEU TYR SER GLN PHE LEU GLY LYS SEQRES 12 B 217 GLN PRO TRP PHE LEU GLY ASP LYS ILE THR PHE VAL ASP SEQRES 13 B 217 PHE ILE ALA TYR ASP VAL LEU GLU ARG ASN GLN VAL PHE SEQRES 14 B 217 GLU PRO SER CYS LEU ASP ALA PHE PRO ASN LEU LYS ASP SEQRES 15 B 217 PHE ILE SER ARG PHE GLU GLY LEU GLU LYS ILE SER ALA SEQRES 16 B 217 TYR MET LYS SER SER ARG PHE LEU PRO ARG PRO VAL PHE SEQRES 17 B 217 THR LYS MET ALA VAL TRP GLY ASN LYS SEQRES 1 C 217 PRO MET THR LEU GLY TYR TRP ASN ILE ARG GLY LEU ALA SEQRES 2 C 217 HIS SER ILE ARG LEU LEU LEU GLU TYR THR ASP SER SER SEQRES 3 C 217 TYR GLU GLU LYS LYS TYR THR MET GLY ASP ALA PRO ASP SEQRES 4 C 217 TYR ASP ARG SER GLN TRP LEU ASN GLU LYS PHE LYS LEU SEQRES 5 C 217 GLY LEU ASP PHE PRO ASN LEU PRO TYR LEU ILE ASP GLY SEQRES 6 C 217 THR HIS LYS ILE THR GLN SER ASN ALA ILE LEU ARG TYR SEQRES 7 C 217 ILE ALA ARG LYS HIS ASN LEU CYS GLY GLU SER GLU LYS SEQRES 8 C 217 GLU GLN ILE ARG GLU ASP ILE LEU GLU ASN GLN PHE MET SEQRES 9 C 217 ASP SER ARG MET GLN LEU ALA LYS LEU CYS TYR ASP PRO SEQRES 10 C 217 ASP PHE GLU LYS LEU LYS PRO GLU TYR LEU GLN ALA LEU SEQRES 11 C 217 PRO GLU MET LEU LYS LEU TYR SER GLN PHE LEU GLY LYS SEQRES 12 C 217 GLN PRO TRP PHE LEU GLY ASP LYS ILE THR PHE VAL ASP SEQRES 13 C 217 PHE ILE ALA TYR ASP VAL LEU GLU ARG ASN GLN VAL PHE SEQRES 14 C 217 GLU PRO SER CYS LEU ASP ALA PHE PRO ASN LEU LYS ASP SEQRES 15 C 217 PHE ILE SER ARG PHE GLU GLY LEU GLU LYS ILE SER ALA SEQRES 16 C 217 TYR MET LYS SER SER ARG PHE LEU PRO ARG PRO VAL PHE SEQRES 17 C 217 THR LYS MET ALA VAL TRP GLY ASN LYS SEQRES 1 D 217 PRO MET THR LEU GLY TYR TRP ASN ILE ARG GLY LEU ALA SEQRES 2 D 217 HIS SER ILE ARG LEU LEU LEU GLU TYR THR ASP SER SER SEQRES 3 D 217 TYR GLU GLU LYS LYS TYR THR MET GLY ASP ALA PRO ASP SEQRES 4 D 217 TYR ASP ARG SER GLN TRP LEU ASN GLU LYS PHE LYS LEU SEQRES 5 D 217 GLY LEU ASP PHE PRO ASN LEU PRO TYR LEU ILE ASP GLY SEQRES 6 D 217 THR HIS LYS ILE THR GLN SER ASN ALA ILE LEU ARG TYR SEQRES 7 D 217 ILE ALA ARG LYS HIS ASN LEU CYS GLY GLU SER GLU LYS SEQRES 8 D 217 GLU GLN ILE ARG GLU ASP ILE LEU GLU ASN GLN PHE MET SEQRES 9 D 217 ASP SER ARG MET GLN LEU ALA LYS LEU CYS TYR ASP PRO SEQRES 10 D 217 ASP PHE GLU LYS LEU LYS PRO GLU TYR LEU GLN ALA LEU SEQRES 11 D 217 PRO GLU MET LEU LYS LEU TYR SER GLN PHE LEU GLY LYS SEQRES 12 D 217 GLN PRO TRP PHE LEU GLY ASP LYS ILE THR PHE VAL ASP SEQRES 13 D 217 PHE ILE ALA TYR ASP VAL LEU GLU ARG ASN GLN VAL PHE SEQRES 14 D 217 GLU PRO SER CYS LEU ASP ALA PHE PRO ASN LEU LYS ASP SEQRES 15 D 217 PHE ILE SER ARG PHE GLU GLY LEU GLU LYS ILE SER ALA SEQRES 16 D 217 TYR MET LYS SER SER ARG PHE LEU PRO ARG PRO VAL PHE SEQRES 17 D 217 THR LYS MET ALA VAL TRP GLY ASN LYS HET GSM A1218 21 HET GSM B2218 21 HET GSM C3218 21 HET GSM D4218 21 HETNAM GSM L-GAMMA-GLUTAMYL-S-METHYLCYSTEINYLGLYCINE HETSYN GSM S-METHYL-GLUTATHIONE FORMUL 5 GSM 4(C11 H19 N3 O6 S) FORMUL 9 HOH *203(H2 O) HELIX 1 1 ALA A 13 THR A 23 1 11 HELIX 2 2 ARG A 42 LYS A 49 1 8 HELIX 3 3 GLN A 71 HIS A 83 1 13 HELIX 4 4 SER A 89 TYR A 115 1 27 HELIX 5 5 ASP A 118 GLY A 142 1 25 HELIX 6 6 THR A 153 GLU A 170 1 18 HELIX 7 7 PHE A 177 GLY A 189 1 13 HELIX 8 8 LEU A 190 LYS A 198 1 9 HELIX 9 9 ALA B 13 THR B 23 1 11 HELIX 10 10 ARG B 42 PHE B 50 1 9 HELIX 11 11 GLN B 71 HIS B 83 1 13 HELIX 12 12 SER B 89 ASP B 116 1 28 HELIX 13 13 ASP B 118 GLY B 142 1 25 HELIX 14 14 THR B 153 GLU B 170 1 18 HELIX 15 15 PHE B 177 GLY B 189 1 13 HELIX 16 16 LEU B 190 LYS B 198 1 9 HELIX 17 17 ALA C 13 THR C 23 1 11 HELIX 18 18 ARG C 42 LYS C 49 1 8 HELIX 19 19 PHE C 50 LEU C 52 5 3 HELIX 20 20 GLN C 71 HIS C 83 1 13 HELIX 21 21 SER C 89 ASP C 116 1 28 HELIX 22 22 ASP C 118 GLY C 142 1 25 HELIX 23 23 PHE C 154 GLU C 170 1 17 HELIX 24 24 PHE C 177 GLY C 189 1 13 HELIX 25 25 LEU C 190 LYS C 198 1 9 HELIX 26 26 ARG D 10 LEU D 12 5 3 HELIX 27 27 ALA D 13 THR D 23 1 11 HELIX 28 28 ARG D 42 LYS D 49 1 8 HELIX 29 29 GLN D 71 HIS D 83 1 13 HELIX 30 30 SER D 89 ASP D 116 1 28 HELIX 31 31 ASP D 118 GLY D 142 1 25 HELIX 32 32 THR D 153 GLU D 170 1 18 HELIX 33 33 PHE D 177 GLY D 189 1 13 HELIX 34 34 LEU D 190 LYS D 198 1 9 SHEET 1 A 4 TYR A 27 TYR A 32 0 SHEET 2 A 4 MET A 2 TRP A 7 1 N MET A 2 O GLU A 28 SHEET 3 A 4 TYR A 61 ASP A 64 -1 O ILE A 63 N THR A 3 SHEET 4 A 4 HIS A 67 THR A 70 -1 O ILE A 69 N LEU A 62 SHEET 1 B 4 TYR B 27 TYR B 32 0 SHEET 2 B 4 MET B 2 TRP B 7 1 N MET B 2 O GLU B 28 SHEET 3 B 4 TYR B 61 ASP B 64 -1 O ILE B 63 N THR B 3 SHEET 4 B 4 HIS B 67 THR B 70 -1 O ILE B 69 N LEU B 62 SHEET 1 C 4 TYR C 27 TYR C 32 0 SHEET 2 C 4 MET C 2 TRP C 7 1 N MET C 2 O GLU C 28 SHEET 3 C 4 TYR C 61 ASP C 64 -1 O ILE C 63 N THR C 3 SHEET 4 C 4 HIS C 67 THR C 70 -1 O HIS C 67 N ASP C 64 SHEET 1 D 4 TYR D 27 TYR D 32 0 SHEET 2 D 4 MET D 2 TRP D 7 1 N MET D 2 O GLU D 28 SHEET 3 D 4 TYR D 61 ASP D 64 -1 O ILE D 63 N THR D 3 SHEET 4 D 4 HIS D 67 THR D 70 -1 O ILE D 69 N LEU D 62 CISPEP 1 ALA A 37 PRO A 38 0 1.95 CISPEP 2 LEU A 59 PRO A 60 0 12.86 CISPEP 3 ARG A 205 PRO A 206 0 -3.50 CISPEP 4 ALA B 37 PRO B 38 0 1.07 CISPEP 5 LEU B 59 PRO B 60 0 13.32 CISPEP 6 ARG B 205 PRO B 206 0 2.23 CISPEP 7 ALA C 37 PRO C 38 0 10.12 CISPEP 8 LEU C 59 PRO C 60 0 14.78 CISPEP 9 ARG C 205 PRO C 206 0 -6.04 CISPEP 10 ALA D 37 PRO D 38 0 1.54 CISPEP 11 LEU D 59 PRO D 60 0 12.90 CISPEP 12 ARG D 205 PRO D 206 0 -5.86 SITE 1 AC1 13 TYR A 6 TRP A 7 LEU A 12 ARG A 42 SITE 2 AC1 13 TRP A 45 LYS A 49 ASN A 58 LEU A 59 SITE 3 AC1 13 PRO A 60 GLN A 71 SER A 72 HOH A1223 SITE 4 AC1 13 ASP B 105 SITE 1 AC2 14 ASP A 105 TYR B 6 TRP B 7 LEU B 12 SITE 2 AC2 14 ARG B 42 TRP B 45 LYS B 49 ASN B 58 SITE 3 AC2 14 LEU B 59 PRO B 60 GLN B 71 SER B 72 SITE 4 AC2 14 HOH B2221 HOH B2258 SITE 1 AC3 15 TYR C 6 TRP C 7 LEU C 12 ARG C 42 SITE 2 AC3 15 TRP C 45 LYS C 49 ASN C 58 LEU C 59 SITE 3 AC3 15 PRO C 60 GLN C 71 SER C 72 HOH C3238 SITE 4 AC3 15 HOH C3248 HOH C3253 ASP D 105 SITE 1 AC4 14 ASP C 105 HOH C3221 TYR D 6 TRP D 7 SITE 2 AC4 14 LEU D 12 ARG D 42 TRP D 45 LYS D 49 SITE 3 AC4 14 ASN D 58 LEU D 59 PRO D 60 GLN D 71 SITE 4 AC4 14 SER D 72 HOH D4225 CRYST1 56.120 76.716 212.449 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017819 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013035 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004707 0.00000 MASTER 397 0 4 34 16 0 16 6 0 0 0 68 END