HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 11-JUL-05 2A9F TITLE CRYSTAL STRUCTURE OF A PUTATIVE MALIC ENZYME ((S)-MALATE:NAD+ TITLE 2 OXIDOREDUCTASE (DECARBOXYLATING)) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE MALIC ENZYME ((S)-MALATE:NAD+ OXIDOREDUCTASE COMPND 3 (DECARBOXYLATING)); COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PYOGENES; SOURCE 3 ORGANISM_TAXID: 1314; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYPOTHETICAL PROTEIN, PUTATIVE MALIC ENZYME ((S)-MALATE:NAD+ KEYWDS 2 OXIDOREDUCTASE (DECARBOXYLATING)), STRUCTURAL GENOMICS, PSI, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL KEYWDS 4 GENOMICS, NYSGXRC, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR J.SEETHARAMAN,S.SWAMINATHAN,S.K.BURLEY,NEW YORK SGX RESEARCH CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS (NYSGXRC) REVDAT 4 03-FEB-21 2A9F 1 AUTHOR REMARK SEQADV LINK REVDAT 3 05-OCT-16 2A9F 1 REMARK VERSN REVDAT 2 24-FEB-09 2A9F 1 VERSN REVDAT 1 02-AUG-05 2A9F 0 JRNL AUTH J.SEETHARAMAN,S.SWAMINATHAN JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE MALIC ENZYME JRNL TITL 2 ((S)-MALATE:NAD+ OXIDOREDUCTASE (DECARBOXYLATING)) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.79 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 206885.570 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.2 REMARK 3 NUMBER OF REFLECTIONS : 26434 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.260 REMARK 3 FREE R VALUE : 0.304 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1016 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.010 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.66 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3604 REMARK 3 BIN R VALUE (WORKING SET) : 0.4090 REMARK 3 BIN FREE R VALUE : 0.4660 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 128 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.045 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5563 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 49 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 52.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 10.86000 REMARK 3 B22 (A**2) : -1.20000 REMARK 3 B33 (A**2) : -9.66000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.45 REMARK 3 ESD FROM SIGMAA (A) : 0.47 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.53 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.58 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.180 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.320 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.180 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.770 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.330 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.27 REMARK 3 BSOL : 29.49 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : &_1_TOPOLOGY_INFILE_1 REMARK 3 TOPOLOGY FILE 2 : &_1_TOPOLOGY_INFILE_2 REMARK 3 TOPOLOGY FILE 3 : &_1_TOPOLOGY_INFILE_3 REMARK 3 TOPOLOGY FILE 4 : &_1_TOPOLOGY_INFILE_4 REMARK 3 TOPOLOGY FILE 5 : &_1_TOPOLOGY_INFILE_5 REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2A9F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUL-05. REMARK 100 THE DEPOSITION ID IS D_1000033651. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-DEC-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9790, 0.97939, 0.95 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CBASS REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28042 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 12.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08200 REMARK 200 FOR THE DATA SET : 14.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.10 REMARK 200 R MERGE FOR SHELL (I) : 0.51300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE, SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NACL, BISTRIS, PEG3350, PH 5.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.12900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.79700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.62650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.79700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.12900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.62650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -82.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 HIS A 235 REMARK 465 HIS A 236 REMARK 465 LEU A 237 REMARK 465 LYS A 389 REMARK 465 SER A 390 REMARK 465 GLU A 391 REMARK 465 GLY A 392 REMARK 465 HIS A 393 REMARK 465 HIS A 394 REMARK 465 HIS A 395 REMARK 465 HIS A 396 REMARK 465 HIS A 397 REMARK 465 HIS A 398 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 HIS B 235 REMARK 465 HIS B 236 REMARK 465 LEU B 237 REMARK 465 VAL B 386 REMARK 465 VAL B 387 REMARK 465 LEU B 388 REMARK 465 LYS B 389 REMARK 465 SER B 390 REMARK 465 GLU B 391 REMARK 465 GLY B 392 REMARK 465 HIS B 393 REMARK 465 HIS B 394 REMARK 465 HIS B 395 REMARK 465 HIS B 396 REMARK 465 HIS B 397 REMARK 465 HIS B 398 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 3 CG CD1 CD2 REMARK 470 LYS A 4 CG CD CE NZ REMARK 470 GLN A 231 CG CD OE1 NE2 REMARK 470 LEU A 232 CG CD1 CD2 REMARK 470 PRO A 234 CG CD REMARK 470 THR A 251 OG1 CG2 REMARK 470 ASP A 260 CG OD1 OD2 REMARK 470 PHE A 371 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 372 CG CD CE NZ REMARK 470 ARG A 384 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 386 CG1 CG2 REMARK 470 LEU B 3 CG CD1 CD2 REMARK 470 LYS B 4 CG CD CE NZ REMARK 470 LYS B 31 CG CD CE NZ REMARK 470 GLN B 231 CG CD OE1 NE2 REMARK 470 PRO B 234 CG CD REMARK 470 ASP B 260 CG OD1 OD2 REMARK 470 LYS B 278 CG CD CE NZ REMARK 470 ARG B 282 CG CD NE CZ NH1 NH2 REMARK 470 PHE B 371 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 372 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 129 C - N - CD ANGL. DEV. = -14.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 4 65.61 163.23 REMARK 500 GLN A 6 -66.44 -139.89 REMARK 500 LEU A 7 -47.87 163.66 REMARK 500 GLN A 9 33.84 -64.97 REMARK 500 ILE A 30 24.06 -151.57 REMARK 500 TYR A 40 -151.85 -140.43 REMARK 500 THR A 41 -77.89 9.44 REMARK 500 PRO A 42 -75.89 -71.36 REMARK 500 LEU A 78 -123.14 44.24 REMARK 500 LEU A 80 -134.53 -93.29 REMARK 500 ASP A 82 94.48 -63.88 REMARK 500 ASP A 163 4.95 -61.46 REMARK 500 GLN A 164 -72.99 -123.24 REMARK 500 LEU A 181 24.04 -79.54 REMARK 500 LYS A 183 33.19 76.15 REMARK 500 ALA A 212 123.98 -21.82 REMARK 500 ASP A 219 -159.64 -116.53 REMARK 500 ALA A 229 58.53 -60.20 REMARK 500 LEU A 232 168.83 -41.62 REMARK 500 ALA A 233 27.60 -72.38 REMARK 500 LYS A 248 63.02 61.12 REMARK 500 THR A 251 -138.17 -139.31 REMARK 500 PHE A 262 152.60 166.33 REMARK 500 SER A 266 -0.22 -153.35 REMARK 500 ALA A 273 -56.77 -28.95 REMARK 500 ALA A 280 -171.33 -59.07 REMARK 500 ASN A 290 176.39 -47.60 REMARK 500 PRO A 291 -87.63 20.13 REMARK 500 ILE A 295 122.06 179.28 REMARK 500 ASN A 317 66.85 67.46 REMARK 500 LEU A 323 1.65 -68.41 REMARK 500 ALA A 324 -52.52 -123.18 REMARK 500 THR A 339 155.36 175.95 REMARK 500 PRO A 357 -71.62 -66.23 REMARK 500 ALA A 360 126.23 149.26 REMARK 500 LEU A 361 8.33 49.86 REMARK 500 ILE A 366 -155.84 -81.92 REMARK 500 ILE A 367 71.85 -109.53 REMARK 500 PRO A 368 -157.87 -78.94 REMARK 500 PHE A 371 -6.95 -21.50 REMARK 500 LYS A 381 -26.61 84.32 REMARK 500 ARG A 384 58.87 -62.69 REMARK 500 SER A 385 57.80 -157.28 REMARK 500 VAL A 387 0.41 -59.93 REMARK 500 ALA B 11 28.24 -60.71 REMARK 500 LEU B 12 -85.04 -121.53 REMARK 500 GLU B 13 52.93 22.12 REMARK 500 ILE B 30 -108.03 -130.12 REMARK 500 LYS B 31 -6.31 28.28 REMARK 500 TYR B 40 -153.30 -134.72 REMARK 500 REMARK 500 THIS ENTRY HAS 80 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 801 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 137 OE2 REMARK 620 2 ASP A 138 OD1 98.2 REMARK 620 3 ASP A 163 OD1 97.8 99.8 REMARK 620 4 ASP A 163 OD2 68.0 64.8 51.3 REMARK 620 5 HOH A 818 O 164.7 88.9 67.6 103.6 REMARK 620 6 HOH A 819 O 96.0 80.3 166.1 137.7 98.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 800 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 137 OE2 REMARK 620 2 ASP B 138 OD1 82.6 REMARK 620 3 ASP B 163 OD2 68.1 66.6 REMARK 620 4 ASP B 163 OD1 88.2 114.3 50.0 REMARK 620 5 HOH B 807 O 170.2 107.1 116.5 88.9 REMARK 620 6 HOH B 818 O 78.9 157.5 117.0 77.9 91.3 REMARK 620 7 HOH B 819 O 83.0 70.9 130.7 169.1 98.8 94.1 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 800 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 801 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-T1727 RELATED DB: TARGETDB DBREF 2A9F A 4 390 UNP Q99ZS1 Q99ZS1_STRP1 2 388 DBREF 2A9F B 4 390 UNP Q99ZS1 Q99ZS1_STRP1 2 388 SEQADV 2A9F MET A 1 UNP Q99ZS1 CLONING ARTIFACT SEQADV 2A9F SER A 2 UNP Q99ZS1 CLONING ARTIFACT SEQADV 2A9F LEU A 3 UNP Q99ZS1 CLONING ARTIFACT SEQADV 2A9F GLU A 391 UNP Q99ZS1 CLONING ARTIFACT SEQADV 2A9F GLY A 392 UNP Q99ZS1 CLONING ARTIFACT SEQADV 2A9F HIS A 393 UNP Q99ZS1 EXPRESSION TAG SEQADV 2A9F HIS A 394 UNP Q99ZS1 EXPRESSION TAG SEQADV 2A9F HIS A 395 UNP Q99ZS1 EXPRESSION TAG SEQADV 2A9F HIS A 396 UNP Q99ZS1 EXPRESSION TAG SEQADV 2A9F HIS A 397 UNP Q99ZS1 EXPRESSION TAG SEQADV 2A9F HIS A 398 UNP Q99ZS1 EXPRESSION TAG SEQADV 2A9F MET B 1 UNP Q99ZS1 CLONING ARTIFACT SEQADV 2A9F SER B 2 UNP Q99ZS1 CLONING ARTIFACT SEQADV 2A9F LEU B 3 UNP Q99ZS1 CLONING ARTIFACT SEQADV 2A9F GLU B 391 UNP Q99ZS1 CLONING ARTIFACT SEQADV 2A9F GLY B 392 UNP Q99ZS1 CLONING ARTIFACT SEQADV 2A9F HIS B 393 UNP Q99ZS1 EXPRESSION TAG SEQADV 2A9F HIS B 394 UNP Q99ZS1 EXPRESSION TAG SEQADV 2A9F HIS B 395 UNP Q99ZS1 EXPRESSION TAG SEQADV 2A9F HIS B 396 UNP Q99ZS1 EXPRESSION TAG SEQADV 2A9F HIS B 397 UNP Q99ZS1 EXPRESSION TAG SEQADV 2A9F HIS B 398 UNP Q99ZS1 EXPRESSION TAG SEQRES 1 A 398 MET SER LEU LYS ASN GLN LEU GLY GLN LEU ALA LEU GLU SEQRES 2 A 398 GLN ALA LYS THR PHE GLY GLY LYS LEU GLU VAL GLN PRO SEQRES 3 A 398 LYS VAL ASP ILE LYS THR LYS HIS ASP LEU SER ILE ALA SEQRES 4 A 398 TYR THR PRO GLY VAL ALA SER VAL SER SER ALA ILE ALA SEQRES 5 A 398 LYS ASP LYS THR LEU ALA TYR ASP LEU THR THR LYS LYS SEQRES 6 A 398 ASN THR VAL ALA VAL ILE SER ASP GLY THR ALA VAL LEU SEQRES 7 A 398 GLY LEU GLY ASP ILE GLY PRO GLU ALA ALA MET PRO VAL SEQRES 8 A 398 MET GLU GLY LYS ALA ALA LEU PHE LYS ALA PHE ALA GLY SEQRES 9 A 398 VAL ASP ALA ILE PRO ILE VAL LEU ASP THR LYS ASP THR SEQRES 10 A 398 GLU GLU ILE ILE SER ILE VAL LYS ALA LEU ALA PRO THR SEQRES 11 A 398 PHE GLY GLY ILE ASN LEU GLU ASP ILE SER ALA PRO ARG SEQRES 12 A 398 CYS PHE GLU ILE GLU GLN ARG LEU ILE LYS GLU CYS HIS SEQRES 13 A 398 ILE PRO VAL PHE HIS ASP ASP GLN HIS GLY THR ALA ILE SEQRES 14 A 398 VAL VAL LEU ALA ALA ILE PHE ASN SER LEU LYS LEU LEU SEQRES 15 A 398 LYS LYS SER LEU ASP GLU VAL SER ILE VAL VAL ASN GLY SEQRES 16 A 398 GLY GLY SER ALA GLY LEU SER ILE THR ARG LYS LEU LEU SEQRES 17 A 398 ALA ALA GLY ALA THR LYS VAL THR VAL VAL ASP LYS PHE SEQRES 18 A 398 GLY ILE ILE ASN GLU GLN GLU ALA ALA GLN LEU ALA PRO SEQRES 19 A 398 HIS HIS LEU ASP ILE ALA LYS VAL THR ASN ARG GLU PHE SEQRES 20 A 398 LYS SER GLY THR LEU GLU ASP ALA LEU GLU GLY ALA ASP SEQRES 21 A 398 ILE PHE ILE GLY VAL SER ALA PRO GLY VAL LEU LYS ALA SEQRES 22 A 398 GLU TRP ILE SER LYS MET ALA ALA ARG PRO VAL ILE PHE SEQRES 23 A 398 ALA MET ALA ASN PRO ILE PRO GLU ILE TYR PRO ASP GLU SEQRES 24 A 398 ALA LEU GLU ALA GLY ALA TYR ILE VAL GLY THR GLY ARG SEQRES 25 A 398 SER ASP PHE PRO ASN GLN ILE ASN ASN VAL LEU ALA PHE SEQRES 26 A 398 PRO GLY ILE PHE ARG GLY ALA LEU ASP ALA ARG ALA LYS SEQRES 27 A 398 THR ILE THR VAL GLU MET GLN ILE ALA ALA ALA LYS GLY SEQRES 28 A 398 ILE ALA SER LEU VAL PRO ASP ASP ALA LEU SER THR THR SEQRES 29 A 398 ASN ILE ILE PRO ASP ALA PHE LYS GLU GLY VAL ALA GLU SEQRES 30 A 398 ILE VAL ALA LYS SER VAL ARG SER VAL VAL LEU LYS SER SEQRES 31 A 398 GLU GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 398 MET SER LEU LYS ASN GLN LEU GLY GLN LEU ALA LEU GLU SEQRES 2 B 398 GLN ALA LYS THR PHE GLY GLY LYS LEU GLU VAL GLN PRO SEQRES 3 B 398 LYS VAL ASP ILE LYS THR LYS HIS ASP LEU SER ILE ALA SEQRES 4 B 398 TYR THR PRO GLY VAL ALA SER VAL SER SER ALA ILE ALA SEQRES 5 B 398 LYS ASP LYS THR LEU ALA TYR ASP LEU THR THR LYS LYS SEQRES 6 B 398 ASN THR VAL ALA VAL ILE SER ASP GLY THR ALA VAL LEU SEQRES 7 B 398 GLY LEU GLY ASP ILE GLY PRO GLU ALA ALA MET PRO VAL SEQRES 8 B 398 MET GLU GLY LYS ALA ALA LEU PHE LYS ALA PHE ALA GLY SEQRES 9 B 398 VAL ASP ALA ILE PRO ILE VAL LEU ASP THR LYS ASP THR SEQRES 10 B 398 GLU GLU ILE ILE SER ILE VAL LYS ALA LEU ALA PRO THR SEQRES 11 B 398 PHE GLY GLY ILE ASN LEU GLU ASP ILE SER ALA PRO ARG SEQRES 12 B 398 CYS PHE GLU ILE GLU GLN ARG LEU ILE LYS GLU CYS HIS SEQRES 13 B 398 ILE PRO VAL PHE HIS ASP ASP GLN HIS GLY THR ALA ILE SEQRES 14 B 398 VAL VAL LEU ALA ALA ILE PHE ASN SER LEU LYS LEU LEU SEQRES 15 B 398 LYS LYS SER LEU ASP GLU VAL SER ILE VAL VAL ASN GLY SEQRES 16 B 398 GLY GLY SER ALA GLY LEU SER ILE THR ARG LYS LEU LEU SEQRES 17 B 398 ALA ALA GLY ALA THR LYS VAL THR VAL VAL ASP LYS PHE SEQRES 18 B 398 GLY ILE ILE ASN GLU GLN GLU ALA ALA GLN LEU ALA PRO SEQRES 19 B 398 HIS HIS LEU ASP ILE ALA LYS VAL THR ASN ARG GLU PHE SEQRES 20 B 398 LYS SER GLY THR LEU GLU ASP ALA LEU GLU GLY ALA ASP SEQRES 21 B 398 ILE PHE ILE GLY VAL SER ALA PRO GLY VAL LEU LYS ALA SEQRES 22 B 398 GLU TRP ILE SER LYS MET ALA ALA ARG PRO VAL ILE PHE SEQRES 23 B 398 ALA MET ALA ASN PRO ILE PRO GLU ILE TYR PRO ASP GLU SEQRES 24 B 398 ALA LEU GLU ALA GLY ALA TYR ILE VAL GLY THR GLY ARG SEQRES 25 B 398 SER ASP PHE PRO ASN GLN ILE ASN ASN VAL LEU ALA PHE SEQRES 26 B 398 PRO GLY ILE PHE ARG GLY ALA LEU ASP ALA ARG ALA LYS SEQRES 27 B 398 THR ILE THR VAL GLU MET GLN ILE ALA ALA ALA LYS GLY SEQRES 28 B 398 ILE ALA SER LEU VAL PRO ASP ASP ALA LEU SER THR THR SEQRES 29 B 398 ASN ILE ILE PRO ASP ALA PHE LYS GLU GLY VAL ALA GLU SEQRES 30 B 398 ILE VAL ALA LYS SER VAL ARG SER VAL VAL LEU LYS SER SEQRES 31 B 398 GLU GLY HIS HIS HIS HIS HIS HIS HET MG A 801 1 HET MG B 800 1 HETNAM MG MAGNESIUM ION FORMUL 3 MG 2(MG 2+) FORMUL 5 HOH *49(H2 O) HELIX 1 1 LEU A 12 GLY A 19 1 8 HELIX 2 2 THR A 32 TYR A 40 1 9 HELIX 3 3 VAL A 44 ASP A 54 1 11 HELIX 4 4 LEU A 57 THR A 62 1 6 HELIX 5 5 THR A 63 LYS A 65 5 3 HELIX 6 6 GLY A 84 ALA A 103 1 20 HELIX 7 7 ASP A 116 ALA A 128 1 13 HELIX 8 8 PRO A 129 PHE A 131 5 3 HELIX 9 9 PRO A 142 CYS A 155 1 14 HELIX 10 10 ASP A 162 LEU A 181 1 20 HELIX 11 11 GLY A 197 GLY A 211 1 15 HELIX 12 12 ASP A 238 ASN A 244 1 7 HELIX 13 13 GLU A 253 GLY A 258 1 6 HELIX 14 14 LYS A 272 LYS A 278 1 7 HELIX 15 15 TYR A 296 GLU A 302 1 7 HELIX 16 16 ASN A 320 LEU A 323 5 4 HELIX 17 17 ALA A 324 ARG A 336 1 13 HELIX 18 18 THR A 341 LEU A 355 1 15 HELIX 19 19 LYS A 372 ALA A 380 1 9 HELIX 20 20 GLU B 13 GLY B 19 1 7 HELIX 21 21 THR B 32 TYR B 40 1 9 HELIX 22 22 GLY B 43 ASP B 54 1 12 HELIX 23 23 LEU B 57 THR B 62 1 6 HELIX 24 24 THR B 63 LYS B 65 5 3 HELIX 25 25 GLY B 84 ALA B 103 1 20 HELIX 26 26 ASP B 116 ALA B 128 1 13 HELIX 27 27 PRO B 129 PHE B 131 5 3 HELIX 28 28 PRO B 142 LYS B 153 1 12 HELIX 29 29 ASP B 162 LYS B 183 1 22 HELIX 30 30 GLY B 197 GLY B 211 1 15 HELIX 31 31 ILE B 239 ASN B 244 5 6 HELIX 32 32 TRP B 275 MET B 279 5 5 HELIX 33 33 TYR B 296 ALA B 303 1 8 HELIX 34 34 ASN B 320 LEU B 323 5 4 HELIX 35 35 ALA B 324 ALA B 335 1 12 HELIX 36 36 THR B 341 LEU B 355 1 15 HELIX 37 37 ALA B 370 ALA B 380 1 11 SHEET 1 A 2 LEU A 22 PRO A 26 0 SHEET 2 A 2 LEU B 22 PRO B 26 -1 O GLN B 25 N GLU A 23 SHEET 1 B 4 ASP A 106 VAL A 111 0 SHEET 2 B 4 THR A 67 SER A 72 1 N VAL A 68 O ASP A 106 SHEET 3 B 4 GLY A 133 LEU A 136 1 O ASN A 135 N ALA A 69 SHEET 4 B 4 VAL A 159 HIS A 161 1 O PHE A 160 N ILE A 134 SHEET 1 C 6 GLY A 222 ILE A 223 0 SHEET 2 C 6 LYS A 214 ASP A 219 -1 N ASP A 219 O GLY A 222 SHEET 3 C 6 SER A 190 ASN A 194 1 N VAL A 193 O VAL A 218 SHEET 4 C 6 PHE A 262 GLY A 264 1 O GLY A 264 N ASN A 194 SHEET 5 C 6 VAL A 284 ALA A 287 1 O PHE A 286 N ILE A 263 SHEET 6 C 6 ILE A 307 THR A 310 1 O GLY A 309 N ILE A 285 SHEET 1 D 4 ASP B 106 VAL B 111 0 SHEET 2 D 4 THR B 67 SER B 72 1 N VAL B 68 O ASP B 106 SHEET 3 D 4 GLY B 133 LEU B 136 1 O ASN B 135 N ALA B 69 SHEET 4 D 4 VAL B 159 HIS B 161 1 O PHE B 160 N LEU B 136 SHEET 1 E 6 GLY B 222 ILE B 223 0 SHEET 2 E 6 VAL B 215 ASP B 219 -1 N ASP B 219 O GLY B 222 SHEET 3 E 6 ILE B 191 ASN B 194 1 N VAL B 193 O THR B 216 SHEET 4 E 6 PHE B 262 VAL B 265 1 O PHE B 262 N VAL B 192 SHEET 5 E 6 VAL B 284 ALA B 287 1 O PHE B 286 N ILE B 263 SHEET 6 E 6 ILE B 307 THR B 310 1 O ILE B 307 N ILE B 285 LINK OE2 GLU A 137 MG MG A 801 1555 1555 1.96 LINK OD1 ASP A 138 MG MG A 801 1555 1555 2.02 LINK OD1 ASP A 163 MG MG A 801 1555 1555 2.02 LINK OD2 ASP A 163 MG MG A 801 1555 1555 2.79 LINK MG MG A 801 O HOH A 818 1555 1555 2.17 LINK MG MG A 801 O HOH A 819 1555 1555 1.99 LINK OE2 GLU B 137 MG MG B 800 1555 1555 1.97 LINK OD1 ASP B 138 MG MG B 800 1555 1555 2.09 LINK OD2 ASP B 163 MG MG B 800 1555 1555 2.75 LINK OD1 ASP B 163 MG MG B 800 1555 1555 2.33 LINK MG MG B 800 O HOH B 807 1555 1555 2.67 LINK MG MG B 800 O HOH B 818 1555 1555 2.04 LINK MG MG B 800 O HOH B 819 1555 1555 2.02 CISPEP 1 ALA A 141 PRO A 142 0 0.16 CISPEP 2 THR B 41 PRO B 42 0 0.31 CISPEP 3 ALA B 141 PRO B 142 0 0.14 CISPEP 4 ASN B 290 PRO B 291 0 0.30 SITE 1 AC1 6 GLU B 137 ASP B 138 ASP B 163 HOH B 807 SITE 2 AC1 6 HOH B 818 HOH B 819 SITE 1 AC2 5 GLU A 137 ASP A 138 ASP A 163 HOH A 818 SITE 2 AC2 5 HOH A 819 CRYST1 68.258 79.253 145.594 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014650 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012618 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006868 0.00000 MASTER 417 0 2 37 22 0 4 6 0 0 0 62 END