HEADER HYDROLASE 09-JUN-05 1ZXZ TITLE X-RAY STRUCTURE OF PEPTIDE DEFORMYLASE FROM ARABIDOPSIS TITLE 2 THALIANA (ATPDF1A); CRYSTALS GROWN IN PEG-5000 MME AS TITLE 3 PRECIPITANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDE DEFORMYLASE, MITOCHONDRIAL; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: MATURE PROTEIN; COMPND 5 SYNONYM: PDF; POLYPEPTIDE DEFORMYLASE; COMPND 6 EC: 3.5.1.88; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: PDF1A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE30 DERIVATIVE KEYWDS PEPTIDE DEFORMYLASE; PDF1A; EUKARYOTE; HIGHER PLANT; KEYWDS 2 ARABIDOPSIS THALIANA; ZINC ION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.FIEULAINE,C.JUILLAN-BINARD,A.SERERO,F.DARDEL,C.GIGLIONE, AUTHOR 2 T.MEINNEL,J.-L.FERRER REVDAT 3 24-FEB-09 1ZXZ 1 VERSN REVDAT 2 24-APR-07 1ZXZ 1 JRNL REVDAT 1 27-SEP-05 1ZXZ 0 JRNL AUTH S.FIEULAINE,C.JUILLAN-BINARD,A.SERERO,F.DARDEL, JRNL AUTH 2 C.GIGLIONE,T.MEINNEL,J.-L.FERRER JRNL TITL THE CRYSTAL STRUCTURE OF MITOCHONDRIAL (TYPE 1A) JRNL TITL 2 PEPTIDE DEFORMYLASE PROVIDES CLEAR GUIDELINES FOR JRNL TITL 3 THE DESIGN OF INHIBITORS SPECIFIC FOR THE JRNL TITL 4 BACTERIAL FORMS JRNL REF J.BIOL.CHEM. V. 280 42315 2005 JRNL REFN ISSN 0021-9258 JRNL PMID 16192279 JRNL DOI 10.1074/JBC.M507155200 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 10243 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.291 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 538 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2964 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM SIGMAA (A) : 0.44 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.49 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.62 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.43 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1ZXZ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JUN-05. REMARK 100 THE RCSB ID CODE IS RCSB033250. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JAN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : 2 SILICON 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH 176MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10552 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : 0.10500 REMARK 200 FOR THE DATA SET : 13.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1Y6H REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS GROWN IN PEG-5000 MME AS REMARK 280 PRECIPITANT, PH 5.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.60000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.70000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.90000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.70000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.60000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.90000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: DIMER IN THE ASYMMETRIC UNIT, BUT IT IS UNCLEAR WHETHER REMARK 300 IT IS A BIOLOGICAL DIMER OR NOT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 194 REMARK 465 HIS A 195 REMARK 465 HIS A 196 REMARK 465 HIS A 197 REMARK 465 MET B 1 REMARK 465 HIS B 193 REMARK 465 HIS B 194 REMARK 465 HIS B 195 REMARK 465 HIS B 196 REMARK 465 HIS B 197 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 29 CG CD OE1 OE2 REMARK 470 TYR A 73 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 76 CG CD CE NZ REMARK 470 GLU A 77 CG CD OE1 OE2 REMARK 470 GLU A 184 CG CD OE1 OE2 REMARK 470 LYS A 188 CG CD CE NZ REMARK 470 ARG B 30 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 98 CG CD CE NZ REMARK 470 ASN B 102 CG OD1 ND2 REMARK 470 LYS B 103 CG CD CE NZ REMARK 470 GLN B 135 CG CD OE1 NE2 REMARK 470 LYS B 137 CG CD CE NZ REMARK 470 GLU B 184 CG CD OE1 OE2 REMARK 470 LYS B 188 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP B 36 NH2 ARG B 134 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 85 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 23 105.02 -52.36 REMARK 500 PRO A 46 101.13 -21.08 REMARK 500 PRO A 58 37.87 -69.08 REMARK 500 ALA A 74 122.52 177.33 REMARK 500 ASP A 179 52.29 -96.99 REMARK 500 PRO A 181 136.48 -32.74 REMARK 500 LEU B 44 -72.84 -52.17 REMARK 500 PRO B 46 125.66 -39.35 REMARK 500 PRO B 58 39.28 -67.45 REMARK 500 GLU B 65 141.43 -171.63 REMARK 500 TYR B 73 48.11 -80.64 REMARK 500 PRO B 187 -174.68 -68.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 218 DISTANCE = 5.29 ANGSTROMS REMARK 525 HOH A 229 DISTANCE = 6.68 ANGSTROMS REMARK 525 HOH B 230 DISTANCE = 7.65 ANGSTROMS REMARK 525 HOH A 232 DISTANCE = 8.41 ANGSTROMS REMARK 525 HOH B 232 DISTANCE = 7.80 ANGSTROMS REMARK 525 HOH A 233 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH A 234 DISTANCE = 6.49 ANGSTROMS REMARK 525 HOH B 234 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH A 236 DISTANCE = 5.36 ANGSTROMS REMARK 525 HOH A 237 DISTANCE = 7.48 ANGSTROMS REMARK 525 HOH A 240 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH B 241 DISTANCE = 7.44 ANGSTROMS REMARK 525 HOH B 250 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH B 254 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH A 259 DISTANCE = 5.38 ANGSTROMS REMARK 525 HOH A 260 DISTANCE = 5.45 ANGSTROMS REMARK 525 HOH B 267 DISTANCE = 5.19 ANGSTROMS REMARK 525 HOH A 270 DISTANCE = 8.61 ANGSTROMS REMARK 525 HOH A 275 DISTANCE = 5.28 ANGSTROMS REMARK 525 HOH A 278 DISTANCE = 6.93 ANGSTROMS REMARK 525 HOH B 291 DISTANCE = 5.26 ANGSTROMS REMARK 525 HOH B 297 DISTANCE = 9.85 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 198 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 153 NE2 REMARK 620 2 CYS A 111 SG 124.7 REMARK 620 3 HIS A 157 NE2 95.4 104.7 REMARK 620 4 HOH A 199 O 93.3 135.0 93.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 198 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 111 SG REMARK 620 2 HIS B 153 NE2 131.4 REMARK 620 3 HOH B 199 O 117.2 101.8 REMARK 620 4 HIS B 157 NE2 97.8 96.5 108.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 198 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 198 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ZY0 RELATED DB: PDB REMARK 900 RELATED ID: 1ZY1 RELATED DB: PDB DBREF 1ZXZ A 2 190 UNP Q9FV53 DEFM_ARATH 69 257 DBREF 1ZXZ B 2 190 UNP Q9FV53 DEFM_ARATH 69 257 SEQADV 1ZXZ MET A 1 UNP Q9FV53 INITIATING METHIONINE SEQADV 1ZXZ SER A 191 UNP Q9FV53 EXPRESSION TAG SEQADV 1ZXZ HIS A 192 UNP Q9FV53 EXPRESSION TAG SEQADV 1ZXZ HIS A 193 UNP Q9FV53 EXPRESSION TAG SEQADV 1ZXZ HIS A 194 UNP Q9FV53 EXPRESSION TAG SEQADV 1ZXZ HIS A 195 UNP Q9FV53 EXPRESSION TAG SEQADV 1ZXZ HIS A 196 UNP Q9FV53 EXPRESSION TAG SEQADV 1ZXZ HIS A 197 UNP Q9FV53 EXPRESSION TAG SEQADV 1ZXZ MET B 1 UNP Q9FV53 INITIATING METHIONINE SEQADV 1ZXZ SER B 191 UNP Q9FV53 EXPRESSION TAG SEQADV 1ZXZ HIS B 192 UNP Q9FV53 EXPRESSION TAG SEQADV 1ZXZ HIS B 193 UNP Q9FV53 EXPRESSION TAG SEQADV 1ZXZ HIS B 194 UNP Q9FV53 EXPRESSION TAG SEQADV 1ZXZ HIS B 195 UNP Q9FV53 EXPRESSION TAG SEQADV 1ZXZ HIS B 196 UNP Q9FV53 EXPRESSION TAG SEQADV 1ZXZ HIS B 197 UNP Q9FV53 EXPRESSION TAG SEQRES 1 A 197 MET ASP LEU PRO GLU ILE VAL ALA SER GLY ASP PRO VAL SEQRES 2 A 197 LEU HIS GLU LYS ALA ARG GLU VAL ASP PRO GLY GLU ILE SEQRES 3 A 197 GLY SER GLU ARG ILE GLN LYS ILE ILE ASP ASP MET ILE SEQRES 4 A 197 LYS VAL MET ARG LEU ALA PRO GLY VAL GLY LEU ALA ALA SEQRES 5 A 197 PRO GLN ILE GLY VAL PRO LEU ARG ILE ILE VAL LEU GLU SEQRES 6 A 197 ASP THR LYS GLU TYR ILE SER TYR ALA PRO LYS GLU GLU SEQRES 7 A 197 ILE LEU ALA GLN GLU ARG ARG HIS PHE ASP LEU MET VAL SEQRES 8 A 197 MET VAL ASN PRO VAL LEU LYS GLU ARG SER ASN LYS LYS SEQRES 9 A 197 ALA LEU PHE PHE GLU GLY CYS LEU SER VAL ASP GLY PHE SEQRES 10 A 197 ARG ALA ALA VAL GLU ARG TYR LEU GLU VAL VAL VAL THR SEQRES 11 A 197 GLY TYR ASP ARG GLN GLY LYS ARG ILE GLU VAL ASN ALA SEQRES 12 A 197 SER GLY TRP GLN ALA ARG ILE LEU GLN HIS GLU CYS ASP SEQRES 13 A 197 HIS LEU ASP GLY ASN LEU TYR VAL ASP LYS MET VAL PRO SEQRES 14 A 197 ARG THR PHE ARG THR VAL ASP ASN LEU ASP LEU PRO LEU SEQRES 15 A 197 ALA GLU GLY CYS PRO LYS LEU GLY SER HIS HIS HIS HIS SEQRES 16 A 197 HIS HIS SEQRES 1 B 197 MET ASP LEU PRO GLU ILE VAL ALA SER GLY ASP PRO VAL SEQRES 2 B 197 LEU HIS GLU LYS ALA ARG GLU VAL ASP PRO GLY GLU ILE SEQRES 3 B 197 GLY SER GLU ARG ILE GLN LYS ILE ILE ASP ASP MET ILE SEQRES 4 B 197 LYS VAL MET ARG LEU ALA PRO GLY VAL GLY LEU ALA ALA SEQRES 5 B 197 PRO GLN ILE GLY VAL PRO LEU ARG ILE ILE VAL LEU GLU SEQRES 6 B 197 ASP THR LYS GLU TYR ILE SER TYR ALA PRO LYS GLU GLU SEQRES 7 B 197 ILE LEU ALA GLN GLU ARG ARG HIS PHE ASP LEU MET VAL SEQRES 8 B 197 MET VAL ASN PRO VAL LEU LYS GLU ARG SER ASN LYS LYS SEQRES 9 B 197 ALA LEU PHE PHE GLU GLY CYS LEU SER VAL ASP GLY PHE SEQRES 10 B 197 ARG ALA ALA VAL GLU ARG TYR LEU GLU VAL VAL VAL THR SEQRES 11 B 197 GLY TYR ASP ARG GLN GLY LYS ARG ILE GLU VAL ASN ALA SEQRES 12 B 197 SER GLY TRP GLN ALA ARG ILE LEU GLN HIS GLU CYS ASP SEQRES 13 B 197 HIS LEU ASP GLY ASN LEU TYR VAL ASP LYS MET VAL PRO SEQRES 14 B 197 ARG THR PHE ARG THR VAL ASP ASN LEU ASP LEU PRO LEU SEQRES 15 B 197 ALA GLU GLY CYS PRO LYS LEU GLY SER HIS HIS HIS HIS SEQRES 16 B 197 HIS HIS HET ZN A 198 1 HET ZN B 198 1 HETNAM ZN ZINC ION FORMUL 3 ZN 2(ZN 2+) FORMUL 5 HOH *210(H2 O) HELIX 1 1 ASP A 11 HIS A 15 5 5 HELIX 2 2 SER A 28 ALA A 45 1 18 HELIX 3 3 PRO A 53 GLY A 56 5 4 HELIX 4 4 THR A 67 TYR A 73 1 7 HELIX 5 5 PRO A 75 GLN A 82 1 8 HELIX 6 6 GLY A 145 ASP A 159 1 15 HELIX 7 7 LEU A 162 LYS A 166 5 5 HELIX 8 8 ASP A 176 LEU A 178 5 3 HELIX 9 9 ASP B 11 GLU B 16 5 6 HELIX 10 10 SER B 28 ALA B 45 1 18 HELIX 11 11 PRO B 53 GLY B 56 5 4 HELIX 12 12 THR B 67 TYR B 73 1 7 HELIX 13 13 PRO B 75 GLN B 82 1 8 HELIX 14 14 GLY B 145 LEU B 158 1 14 HELIX 15 15 LEU B 162 LYS B 166 5 5 HELIX 16 16 ASP B 176 LEU B 180 5 5 SHEET 1 A 5 GLY A 49 ALA A 51 0 SHEET 2 A 5 ILE A 61 ASP A 66 -1 O VAL A 63 N LEU A 50 SHEET 3 A 5 PHE A 87 GLU A 99 -1 O MET A 90 N LEU A 64 SHEET 4 A 5 GLU A 126 TYR A 132 -1 O TYR A 132 N VAL A 93 SHEET 5 A 5 ARG A 138 SER A 144 -1 O ILE A 139 N GLY A 131 SHEET 1 B 4 ARG A 173 THR A 174 0 SHEET 2 B 4 VAL A 114 TYR A 124 -1 N ARG A 118 O ARG A 173 SHEET 3 B 4 LYS A 104 CYS A 111 -1 N GLU A 109 O ALA A 119 SHEET 4 B 4 GLY A 190 SER A 191 -1 O GLY A 190 N LEU A 106 SHEET 1 C 5 GLY B 49 ALA B 51 0 SHEET 2 C 5 ILE B 61 ASP B 66 -1 O VAL B 63 N LEU B 50 SHEET 3 C 5 PHE B 87 GLU B 99 -1 O MET B 90 N LEU B 64 SHEET 4 C 5 GLU B 126 TYR B 132 -1 O VAL B 128 N LYS B 98 SHEET 5 C 5 ARG B 138 SER B 144 -1 O ILE B 139 N GLY B 131 SHEET 1 D 4 ARG B 173 THR B 174 0 SHEET 2 D 4 VAL B 114 TYR B 124 -1 N ARG B 118 O ARG B 173 SHEET 3 D 4 LYS B 104 CYS B 111 -1 N GLU B 109 O ALA B 119 SHEET 4 D 4 GLY B 190 SER B 191 -1 O GLY B 190 N LEU B 106 LINK ZN ZN A 198 NE2 HIS A 153 1555 1555 2.03 LINK ZN ZN A 198 SG CYS A 111 1555 1555 2.39 LINK ZN ZN A 198 NE2 HIS A 157 1555 1555 2.06 LINK ZN ZN A 198 O HOH A 199 1555 1555 2.07 LINK ZN ZN B 198 SG CYS B 111 1555 1555 2.43 LINK ZN ZN B 198 NE2 HIS B 153 1555 1555 2.02 LINK ZN ZN B 198 O HOH B 199 1555 1555 2.30 LINK ZN ZN B 198 NE2 HIS B 157 1555 1555 2.30 SITE 1 AC1 5 GLN A 54 CYS A 111 HIS A 153 HIS A 157 SITE 2 AC1 5 HOH A 199 SITE 1 AC2 5 GLN B 54 CYS B 111 HIS B 153 HIS B 157 SITE 2 AC2 5 HOH B 199 CRYST1 51.200 73.800 109.400 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019531 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013550 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009141 0.00000 MASTER 381 0 2 16 18 0 4 6 0 0 0 32 END