HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 02-JUN-05 1ZVP TITLE CRYSTAL STRUCTURE OF A PROTEIN OF UNKNOWN FUNCTION VC0802 FROM VIBRIO TITLE 2 CHOLERAE, POSSIBLE TRANSPORT PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN VC0802; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 666; SOURCE 4 STRAIN: N16961; SOURCE 5 GENE: GI:9655251; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PDM68 KEYWDS VIBRIO CHOLERAE, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, UNKNOWN KEYWDS 3 FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR R.ZHANG,R.WU,S.MOY,F.COLLART,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 3 13-JUL-11 1ZVP 1 VERSN REVDAT 2 24-FEB-09 1ZVP 1 VERSN REVDAT 1 19-JUL-05 1ZVP 0 JRNL AUTH R.ZHANG,R.WU,S.MOY,F.COLLART,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN VC0802 FROM JRNL TITL 2 VIBRIO CHOLERAE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 81.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 37076 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1953 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2062 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 73.37 REMARK 3 BIN R VALUE (WORKING SET) : 0.3840 REMARK 3 BIN FREE R VALUE SET COUNT : 115 REMARK 3 BIN FREE R VALUE : 0.4070 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3868 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 322 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 21.11 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.92000 REMARK 3 B22 (A**2) : -0.51000 REMARK 3 B33 (A**2) : -0.41000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.221 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.188 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.237 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 21.114 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3931 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5324 ; 1.327 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 508 ; 6.143 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 157 ;37.287 ;25.987 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 663 ;19.767 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ;19.433 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 637 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2890 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1645 ; 0.203 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2658 ; 0.299 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 243 ; 0.203 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 60 ; 0.189 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.147 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2595 ; 0.656 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4038 ; 1.215 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1462 ; 1.288 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1286 ; 2.300 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 8 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 68 REMARK 3 RESIDUE RANGE : A 69 A 131 REMARK 3 RESIDUE RANGE : B 2 B 68 REMARK 3 RESIDUE RANGE : B 69 B 131 REMARK 3 RESIDUE RANGE : C 0 C 68 REMARK 3 RESIDUE RANGE : C 69 C 129 REMARK 3 RESIDUE RANGE : D 1 D 68 REMARK 3 RESIDUE RANGE : D 69 D 131 REMARK 3 ORIGIN FOR THE GROUP (A): 32.5210 30.4150 61.6120 REMARK 3 T TENSOR REMARK 3 T11: 0.0983 T22: -0.0184 REMARK 3 T33: -0.1388 T12: 0.1250 REMARK 3 T13: -0.0192 T23: 0.0262 REMARK 3 L TENSOR REMARK 3 L11: 1.9116 L22: 2.3107 REMARK 3 L33: 0.2952 L12: -1.6512 REMARK 3 L13: -0.6938 L23: 0.7953 REMARK 3 S TENSOR REMARK 3 S11: 0.0307 S12: 0.0109 S13: 0.0106 REMARK 3 S21: -0.0318 S22: -0.0096 S23: -0.0224 REMARK 3 S31: -0.0214 S32: -0.0005 S33: -0.0210 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1ZVP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JUN-05. REMARK 100 THE RCSB ID CODE IS RCSB033176. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-DEC-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9798 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRIORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-2 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SBCCOLLECT REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40583 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.4400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 72.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.72000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.280 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 45% GLYCEROL, PH 8.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.71650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 81.71650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 48.61200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.78050 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 48.61200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.78050 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 81.71650 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 48.61200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 49.78050 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 81.71650 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 48.61200 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 49.78050 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THIS PROTEIN EXISTED AS DIMER. MOLA+MOLD, MOLB+MOLC ARE TWO REMARK 300 DIMERS IN ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 SER A 80 REMARK 465 LEU A 81 REMARK 465 ALA A 132 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 SER B 79 REMARK 465 SER B 80 REMARK 465 ALA B 132 REMARK 465 HIS C 78 REMARK 465 SER C 79 REMARK 465 ALA C 130 REMARK 465 GLN C 131 REMARK 465 ALA C 132 REMARK 465 GLY D 0 REMARK 465 ALA D 132 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 82 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 516 O HOH D 482 1.50 REMARK 500 O HOH B 524 O HOH C 507 1.55 REMARK 500 O HOH A 257 O HOH D 518 1.74 REMARK 500 O HOH A 301 O HOH D 514 1.96 REMARK 500 O HOH B 513 O HOH C 507 2.03 REMARK 500 O HOH B 509 O HOH C 522 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 66 -126.33 -103.54 REMARK 500 ALA A 130 42.85 -79.78 REMARK 500 GLU B 39 72.27 39.34 REMARK 500 SER B 66 -154.43 -101.48 REMARK 500 SER B 67 -162.65 -114.51 REMARK 500 GLN C 61 48.65 -76.64 REMARK 500 ALA C 62 3.29 -161.62 REMARK 500 GLU C 128 -73.39 -115.17 REMARK 500 GLN D 61 33.02 -94.05 REMARK 500 SER D 66 117.50 -23.02 REMARK 500 GLU D 82 52.85 -141.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 261 DISTANCE = 6.12 ANGSTROMS REMARK 525 HOH B 378 DISTANCE = 5.09 ANGSTROMS REMARK 525 HOH C 523 DISTANCE = 5.41 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC26400 RELATED DB: TARGETDB DBREF 1ZVP A 1 132 GB 9655251 AAF93966 1 132 DBREF 1ZVP B 1 132 GB 9655251 AAF93966 1 132 DBREF 1ZVP C 1 132 GB 9655251 AAF93966 1 132 DBREF 1ZVP D 1 132 GB 9655251 AAF93966 1 132 SEQADV 1ZVP GLY A 0 GB 9655251 CLONING ARTIFACT SEQADV 1ZVP GLY B 0 GB 9655251 CLONING ARTIFACT SEQADV 1ZVP GLY C 0 GB 9655251 CLONING ARTIFACT SEQADV 1ZVP GLY D 0 GB 9655251 CLONING ARTIFACT SEQRES 1 A 133 GLY MET SER GLY ILE LYS SER LEU GLU LEU LEU LEU GLN SEQRES 2 A 133 SER MET SER PRO GLU LEU MET ALA GLY ASP TYR VAL PHE SEQRES 3 A 133 CYS THR VAL ASN GLY ALA LEU SER ASP TYR LEU SER LEU SEQRES 4 A 133 GLU PRO ILE ALA THR PHE ARG GLU PRO GLU GLY LEU THR SEQRES 5 A 133 LEU VAL LEU GLU ALA GLU LYS ALA GLN GLN ALA GLY LEU SEQRES 6 A 133 GLU SER SER ALA LEU PHE SER LEU ILE THR LEU THR VAL SEQRES 7 A 133 HIS SER SER LEU GLU ALA VAL GLY LEU THR ALA ALA PHE SEQRES 8 A 133 ALA THR LYS LEU ALA GLU HIS GLY ILE SER ALA ASN VAL SEQRES 9 A 133 ILE ALA GLY TYR TYR HIS ASP HIS ILE PHE VAL GLN LYS SEQRES 10 A 133 GLU LYS ALA GLN GLN ALA LEU GLN ALA LEU GLY GLU PHE SEQRES 11 A 133 ALA GLN ALA SEQRES 1 B 133 GLY MET SER GLY ILE LYS SER LEU GLU LEU LEU LEU GLN SEQRES 2 B 133 SER MET SER PRO GLU LEU MET ALA GLY ASP TYR VAL PHE SEQRES 3 B 133 CYS THR VAL ASN GLY ALA LEU SER ASP TYR LEU SER LEU SEQRES 4 B 133 GLU PRO ILE ALA THR PHE ARG GLU PRO GLU GLY LEU THR SEQRES 5 B 133 LEU VAL LEU GLU ALA GLU LYS ALA GLN GLN ALA GLY LEU SEQRES 6 B 133 GLU SER SER ALA LEU PHE SER LEU ILE THR LEU THR VAL SEQRES 7 B 133 HIS SER SER LEU GLU ALA VAL GLY LEU THR ALA ALA PHE SEQRES 8 B 133 ALA THR LYS LEU ALA GLU HIS GLY ILE SER ALA ASN VAL SEQRES 9 B 133 ILE ALA GLY TYR TYR HIS ASP HIS ILE PHE VAL GLN LYS SEQRES 10 B 133 GLU LYS ALA GLN GLN ALA LEU GLN ALA LEU GLY GLU PHE SEQRES 11 B 133 ALA GLN ALA SEQRES 1 C 133 GLY MET SER GLY ILE LYS SER LEU GLU LEU LEU LEU GLN SEQRES 2 C 133 SER MET SER PRO GLU LEU MET ALA GLY ASP TYR VAL PHE SEQRES 3 C 133 CYS THR VAL ASN GLY ALA LEU SER ASP TYR LEU SER LEU SEQRES 4 C 133 GLU PRO ILE ALA THR PHE ARG GLU PRO GLU GLY LEU THR SEQRES 5 C 133 LEU VAL LEU GLU ALA GLU LYS ALA GLN GLN ALA GLY LEU SEQRES 6 C 133 GLU SER SER ALA LEU PHE SER LEU ILE THR LEU THR VAL SEQRES 7 C 133 HIS SER SER LEU GLU ALA VAL GLY LEU THR ALA ALA PHE SEQRES 8 C 133 ALA THR LYS LEU ALA GLU HIS GLY ILE SER ALA ASN VAL SEQRES 9 C 133 ILE ALA GLY TYR TYR HIS ASP HIS ILE PHE VAL GLN LYS SEQRES 10 C 133 GLU LYS ALA GLN GLN ALA LEU GLN ALA LEU GLY GLU PHE SEQRES 11 C 133 ALA GLN ALA SEQRES 1 D 133 GLY MET SER GLY ILE LYS SER LEU GLU LEU LEU LEU GLN SEQRES 2 D 133 SER MET SER PRO GLU LEU MET ALA GLY ASP TYR VAL PHE SEQRES 3 D 133 CYS THR VAL ASN GLY ALA LEU SER ASP TYR LEU SER LEU SEQRES 4 D 133 GLU PRO ILE ALA THR PHE ARG GLU PRO GLU GLY LEU THR SEQRES 5 D 133 LEU VAL LEU GLU ALA GLU LYS ALA GLN GLN ALA GLY LEU SEQRES 6 D 133 GLU SER SER ALA LEU PHE SER LEU ILE THR LEU THR VAL SEQRES 7 D 133 HIS SER SER LEU GLU ALA VAL GLY LEU THR ALA ALA PHE SEQRES 8 D 133 ALA THR LYS LEU ALA GLU HIS GLY ILE SER ALA ASN VAL SEQRES 9 D 133 ILE ALA GLY TYR TYR HIS ASP HIS ILE PHE VAL GLN LYS SEQRES 10 D 133 GLU LYS ALA GLN GLN ALA LEU GLN ALA LEU GLY GLU PHE SEQRES 11 D 133 ALA GLN ALA FORMUL 5 HOH *322(H2 O) HELIX 1 1 ILE A 4 SER A 13 1 10 HELIX 2 2 ALA A 31 GLU A 39 5 9 HELIX 3 3 ALA A 56 ALA A 62 1 7 HELIX 4 4 GLY A 85 HIS A 97 1 13 HELIX 5 5 LYS A 118 GLY A 127 1 10 HELIX 6 6 SER B 2 GLN B 12 1 11 HELIX 7 7 ALA B 31 GLU B 39 5 9 HELIX 8 8 ALA B 56 ALA B 62 1 7 HELIX 9 9 GLY B 85 HIS B 97 1 13 HELIX 10 10 LYS B 118 GLY B 127 1 10 HELIX 11 11 MET C 1 LEU C 11 1 11 HELIX 12 12 ALA C 31 GLU C 39 5 9 HELIX 13 13 ALA C 56 GLN C 61 1 6 HELIX 14 14 GLY C 85 GLU C 96 1 12 HELIX 15 15 LYS C 118 GLY C 127 1 10 HELIX 16 16 MET D 1 LEU D 11 1 11 HELIX 17 17 ALA D 31 GLU D 39 5 9 HELIX 18 18 ALA D 56 GLN D 61 1 6 HELIX 19 19 GLY D 85 GLU D 96 1 12 HELIX 20 20 LYS D 118 GLY D 127 1 10 SHEET 1 A 4 SER A 15 LEU A 18 0 SHEET 2 A 4 PHE A 70 THR A 76 -1 O THR A 76 N SER A 15 SHEET 3 A 4 ASP A 110 GLN A 115 -1 O ILE A 112 N ILE A 73 SHEET 4 A 4 ASN A 102 ALA A 105 -1 N ILE A 104 O HIS A 111 SHEET 1 B 6 TYR A 23 VAL A 28 0 SHEET 2 B 6 GLY A 49 GLU A 55 -1 O LEU A 50 N VAL A 28 SHEET 3 B 6 ALA A 42 GLU A 46 -1 N PHE A 44 O THR A 51 SHEET 4 B 6 ALA D 42 GLU D 46 -1 O THR D 43 N THR A 43 SHEET 5 B 6 GLY D 49 GLU D 55 -1 O THR D 51 N PHE D 44 SHEET 6 B 6 TYR D 23 VAL D 28 -1 N CYS D 26 O LEU D 52 SHEET 1 C 4 SER B 15 LEU B 18 0 SHEET 2 C 4 PHE B 70 THR B 76 -1 O THR B 74 N GLU B 17 SHEET 3 C 4 ASP B 110 GLN B 115 -1 O ILE B 112 N ILE B 73 SHEET 4 C 4 ASN B 102 ALA B 105 -1 N ILE B 104 O HIS B 111 SHEET 1 D 6 TYR B 23 VAL B 28 0 SHEET 2 D 6 GLY B 49 GLU B 55 -1 O LEU B 52 N CYS B 26 SHEET 3 D 6 ALA B 42 GLU B 46 -1 N PHE B 44 O THR B 51 SHEET 4 D 6 ALA C 42 GLU C 46 -1 O THR C 43 N THR B 43 SHEET 5 D 6 GLY C 49 GLU C 55 -1 O THR C 51 N PHE C 44 SHEET 6 D 6 TYR C 23 VAL C 28 -1 N VAL C 24 O LEU C 54 SHEET 1 E 4 PRO C 16 LEU C 18 0 SHEET 2 E 4 PHE C 70 LEU C 75 -1 O THR C 74 N GLU C 17 SHEET 3 E 4 ASP C 110 GLN C 115 -1 O ILE C 112 N ILE C 73 SHEET 4 E 4 ALA C 101 ALA C 105 -1 N ASN C 102 O PHE C 113 SHEET 1 F 4 PRO D 16 LEU D 18 0 SHEET 2 F 4 PHE D 70 LEU D 75 -1 O THR D 74 N GLU D 17 SHEET 3 F 4 ASP D 110 GLN D 115 -1 O ILE D 112 N ILE D 73 SHEET 4 F 4 ASN D 102 ALA D 105 -1 N ILE D 104 O HIS D 111 CISPEP 1 HIS A 78 SER A 79 0 -2.60 CRYST1 97.224 99.561 163.433 90.00 90.00 90.00 C 2 2 21 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010286 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010044 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006119 0.00000 MASTER 381 0 0 20 28 0 0 6 0 0 0 44 END