HEADER OXIDOREDUCTASE 08-MAR-05 1Z2I TITLE CRYSTAL STRUCTURE OF AGROBACTERIUM TUMEFACIENS MALATE DEHYDROGENASE, TITLE 2 NEW YORK STRUCTURAL GENOMICS CONSORTIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: MALATE DEHYDROGENASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM TUMEFACIENS; SOURCE 3 ORGANISM_TAXID: 358; SOURCE 4 GENE: AGR_L_3209; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET KEYWDS MALATE DEHYDROGENASE, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 NYSGXRC, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,S.C.ALMO,S.K.BURLEY,NEW YORK SGX RESEARCH CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (NYSGXRC) REVDAT 3 03-FEB-21 1Z2I 1 AUTHOR REMARK REVDAT 2 24-FEB-09 1Z2I 1 VERSN REVDAT 1 15-MAR-05 1Z2I 0 JRNL AUTH Y.PATSKOVSKY,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF AGROBACTERIUM TUMEFACIENS MALATE JRNL TITL 2 DEHYDROGENASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 152570.090 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 88.6 REMARK 3 NUMBER OF REFLECTIONS : 71004 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2164 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.34 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 57.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 7482 REMARK 3 BIN R VALUE (WORKING SET) : 0.3100 REMARK 3 BIN FREE R VALUE : 0.3380 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 2.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 226 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.022 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10524 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 176 REMARK 3 SOLVENT ATOMS : 699 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.02000 REMARK 3 B22 (A**2) : -3.02000 REMARK 3 B33 (A**2) : 6.04000 REMARK 3 B12 (A**2) : -0.20000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.31 REMARK 3 ESD FROM SIGMAA (A) : 0.36 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.46 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.260 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 3.780 ; 3.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 5.260 ; 5.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 6.100 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 7.940 ; 7.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.31 REMARK 3 BSOL : 27.77 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN.PARAM REMARK 3 PARAMETER FILE 2 : WATER.PARAM REMARK 3 PARAMETER FILE 3 : NAD.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NAD.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1Z2I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAR-05. REMARK 100 THE DEPOSITION ID IS D_1000032215. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-FEB-05 REMARK 200 TEMPERATURE (KELVIN) : 87.0 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71329 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.1 REMARK 200 DATA REDUNDANCY : 15.90 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : 0.08300 REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 53.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.20800 REMARK 200 R SYM FOR SHELL (I) : 0.25500 REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, 0.1M BIS-TRIS, 0.1M LITHIUM REMARK 280 SULFATE, PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.82333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 97.64667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A HOMODIMER. THE ASYMMETRIC UNIT REMARK 300 CONTAINS TWO HOMODIMERS, AB AND CD CHAINS RESPECTIVELY REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -74.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -75.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 HIS A 3 REMARK 465 GLY A 4 REMARK 465 ASN A 5 REMARK 465 GLU A 6 REMARK 465 LYS A 7 REMARK 465 ALA A 8 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 HIS B 3 REMARK 465 GLY B 4 REMARK 465 ASN B 5 REMARK 465 GLU B 6 REMARK 465 LYS B 7 REMARK 465 ALA B 8 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 HIS C 3 REMARK 465 GLY C 4 REMARK 465 ASN C 5 REMARK 465 GLU C 6 REMARK 465 LYS C 7 REMARK 465 ALA C 8 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 HIS D 3 REMARK 465 GLY D 4 REMARK 465 ASN D 5 REMARK 465 GLU D 6 REMARK 465 LYS D 7 REMARK 465 ALA D 8 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 86 146.71 -179.21 REMARK 500 SER A 123 -161.82 -111.37 REMARK 500 PHE A 152 -33.50 -145.01 REMARK 500 PHE A 162 -68.74 -122.54 REMARK 500 ASN A 166 85.25 5.44 REMARK 500 ALA A 174 -127.05 -91.64 REMARK 500 ALA A 175 -71.02 -144.39 REMARK 500 ASP A 216 154.53 -48.62 REMARK 500 MET A 225 149.56 -177.44 REMARK 500 ALA A 249 -53.66 -122.68 REMARK 500 GLU B 86 146.33 -174.54 REMARK 500 SER B 123 -163.06 -115.71 REMARK 500 PHE B 152 -38.11 -143.74 REMARK 500 ASN B 166 85.93 4.15 REMARK 500 ALA B 174 -129.17 -93.58 REMARK 500 ALA B 175 -71.18 -142.12 REMARK 500 MET B 225 149.61 -173.89 REMARK 500 ALA B 249 -51.39 -123.80 REMARK 500 GLU C 86 146.20 -179.30 REMARK 500 SER C 123 -162.06 -112.12 REMARK 500 PHE C 152 -33.57 -145.03 REMARK 500 PHE C 162 -68.35 -122.28 REMARK 500 ASN C 166 84.70 6.45 REMARK 500 ALA C 174 -127.65 -91.80 REMARK 500 ALA C 175 -70.71 -144.11 REMARK 500 ASP C 216 155.06 -49.16 REMARK 500 MET C 225 149.54 -176.62 REMARK 500 ALA C 249 -54.00 -122.81 REMARK 500 GLU D 86 146.91 -174.92 REMARK 500 SER D 123 -163.63 -114.82 REMARK 500 PHE D 152 -38.16 -143.64 REMARK 500 ASN D 166 85.13 5.25 REMARK 500 ALA D 174 -129.12 -93.87 REMARK 500 ALA D 175 -70.99 -142.05 REMARK 500 MET D 225 148.78 -174.76 REMARK 500 ALA D 249 -52.69 -123.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 132 0.07 SIDE CHAIN REMARK 500 TYR B 132 0.07 SIDE CHAIN REMARK 500 TYR C 132 0.06 SIDE CHAIN REMARK 500 TYR D 132 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD C 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD D 703 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-T1173 RELATED DB: TARGETDB DBREF 1Z2I A 1 358 UNP Q7CRW4 Q7CRW4_AGRT5 1 358 DBREF 1Z2I B 1 358 UNP Q7CRW4 Q7CRW4_AGRT5 1 358 DBREF 1Z2I C 1 358 UNP Q7CRW4 Q7CRW4_AGRT5 1 358 DBREF 1Z2I D 1 358 UNP Q7CRW4 Q7CRW4_AGRT5 1 358 SEQRES 1 A 358 MET ALA HIS GLY ASN GLU LYS ALA THR VAL LEU ALA ARG SEQRES 2 A 358 LEU ASP GLU LEU GLU ARG PHE CYS ARG ALA VAL PHE LEU SEQRES 3 A 358 ALA VAL GLY THR ASP GLU GLU THR ALA ASP ALA ALA THR SEQRES 4 A 358 ARG ALA MET MET HIS GLY THR ARG LEU GLY VAL ASP SER SEQRES 5 A 358 HIS GLY VAL ARG LEU LEU ALA HIS TYR VAL THR ALA LEU SEQRES 6 A 358 GLU GLY GLY ARG LEU ASN ARG ARG PRO GLN ILE SER ARG SEQRES 7 A 358 VAL SER GLY PHE GLY ALA VAL GLU THR ILE ASP ALA ASP SEQRES 8 A 358 HIS ALA HIS GLY ALA ARG ALA THR TYR ALA ALA MET GLU SEQRES 9 A 358 ASN ALA MET ALA LEU ALA GLU LYS PHE GLY ILE GLY ALA SEQRES 10 A 358 VAL ALA ILE ARG ASN SER SER HIS PHE GLY PRO ALA GLY SEQRES 11 A 358 ALA TYR ALA LEU GLU ALA ALA ARG GLN GLY TYR ILE GLY SEQRES 12 A 358 LEU ALA PHE CYS ASN SER ASP SER PHE VAL ARG LEU HIS SEQRES 13 A 358 ASP GLY ALA MET ARG PHE HIS GLY THR ASN PRO ILE ALA SEQRES 14 A 358 VAL GLY VAL PRO ALA ALA ASP ASP MET PRO TRP LEU LEU SEQRES 15 A 358 ASP MET ALA THR SER ALA VAL PRO TYR ASN ARG VAL LEU SEQRES 16 A 358 LEU TYR ARG SER LEU GLY GLN GLN LEU PRO GLN GLY VAL SEQRES 17 A 358 ALA SER ASP GLY ASP GLY VAL ASP THR ARG ASP PRO ASN SEQRES 18 A 358 ALA VAL GLU MET LEU ALA PRO VAL GLY GLY GLU PHE GLY SEQRES 19 A 358 PHE LYS GLY ALA ALA LEU ALA GLY VAL VAL GLU ILE PHE SEQRES 20 A 358 SER ALA VAL LEU THR GLY MET ARG LEU SER PHE ASP LEU SEQRES 21 A 358 ALA PRO MET GLY GLY PRO ASP PHE SER THR PRO ARG GLY SEQRES 22 A 358 LEU GLY ALA PHE VAL LEU ALA LEU LYS PRO GLU ALA PHE SEQRES 23 A 358 LEU GLU ARG ASP VAL PHE ASP GLU SER MET LYS ARG TYR SEQRES 24 A 358 LEU GLU VAL LEU ARG GLY SER PRO ALA ARG GLU ASP CYS SEQRES 25 A 358 LYS VAL MET ALA PRO GLY ASP ARG GLU TRP ALA VAL ALA SEQRES 26 A 358 ALA LYS ARG GLU ARG GLU GLY ALA PRO VAL ASP PRO VAL SEQRES 27 A 358 THR ARG ALA ALA PHE SER GLU LEU ALA GLU LYS PHE SER SEQRES 28 A 358 VAL SER PRO PRO THR TYR HIS SEQRES 1 B 358 MET ALA HIS GLY ASN GLU LYS ALA THR VAL LEU ALA ARG SEQRES 2 B 358 LEU ASP GLU LEU GLU ARG PHE CYS ARG ALA VAL PHE LEU SEQRES 3 B 358 ALA VAL GLY THR ASP GLU GLU THR ALA ASP ALA ALA THR SEQRES 4 B 358 ARG ALA MET MET HIS GLY THR ARG LEU GLY VAL ASP SER SEQRES 5 B 358 HIS GLY VAL ARG LEU LEU ALA HIS TYR VAL THR ALA LEU SEQRES 6 B 358 GLU GLY GLY ARG LEU ASN ARG ARG PRO GLN ILE SER ARG SEQRES 7 B 358 VAL SER GLY PHE GLY ALA VAL GLU THR ILE ASP ALA ASP SEQRES 8 B 358 HIS ALA HIS GLY ALA ARG ALA THR TYR ALA ALA MET GLU SEQRES 9 B 358 ASN ALA MET ALA LEU ALA GLU LYS PHE GLY ILE GLY ALA SEQRES 10 B 358 VAL ALA ILE ARG ASN SER SER HIS PHE GLY PRO ALA GLY SEQRES 11 B 358 ALA TYR ALA LEU GLU ALA ALA ARG GLN GLY TYR ILE GLY SEQRES 12 B 358 LEU ALA PHE CYS ASN SER ASP SER PHE VAL ARG LEU HIS SEQRES 13 B 358 ASP GLY ALA MET ARG PHE HIS GLY THR ASN PRO ILE ALA SEQRES 14 B 358 VAL GLY VAL PRO ALA ALA ASP ASP MET PRO TRP LEU LEU SEQRES 15 B 358 ASP MET ALA THR SER ALA VAL PRO TYR ASN ARG VAL LEU SEQRES 16 B 358 LEU TYR ARG SER LEU GLY GLN GLN LEU PRO GLN GLY VAL SEQRES 17 B 358 ALA SER ASP GLY ASP GLY VAL ASP THR ARG ASP PRO ASN SEQRES 18 B 358 ALA VAL GLU MET LEU ALA PRO VAL GLY GLY GLU PHE GLY SEQRES 19 B 358 PHE LYS GLY ALA ALA LEU ALA GLY VAL VAL GLU ILE PHE SEQRES 20 B 358 SER ALA VAL LEU THR GLY MET ARG LEU SER PHE ASP LEU SEQRES 21 B 358 ALA PRO MET GLY GLY PRO ASP PHE SER THR PRO ARG GLY SEQRES 22 B 358 LEU GLY ALA PHE VAL LEU ALA LEU LYS PRO GLU ALA PHE SEQRES 23 B 358 LEU GLU ARG ASP VAL PHE ASP GLU SER MET LYS ARG TYR SEQRES 24 B 358 LEU GLU VAL LEU ARG GLY SER PRO ALA ARG GLU ASP CYS SEQRES 25 B 358 LYS VAL MET ALA PRO GLY ASP ARG GLU TRP ALA VAL ALA SEQRES 26 B 358 ALA LYS ARG GLU ARG GLU GLY ALA PRO VAL ASP PRO VAL SEQRES 27 B 358 THR ARG ALA ALA PHE SER GLU LEU ALA GLU LYS PHE SER SEQRES 28 B 358 VAL SER PRO PRO THR TYR HIS SEQRES 1 C 358 MET ALA HIS GLY ASN GLU LYS ALA THR VAL LEU ALA ARG SEQRES 2 C 358 LEU ASP GLU LEU GLU ARG PHE CYS ARG ALA VAL PHE LEU SEQRES 3 C 358 ALA VAL GLY THR ASP GLU GLU THR ALA ASP ALA ALA THR SEQRES 4 C 358 ARG ALA MET MET HIS GLY THR ARG LEU GLY VAL ASP SER SEQRES 5 C 358 HIS GLY VAL ARG LEU LEU ALA HIS TYR VAL THR ALA LEU SEQRES 6 C 358 GLU GLY GLY ARG LEU ASN ARG ARG PRO GLN ILE SER ARG SEQRES 7 C 358 VAL SER GLY PHE GLY ALA VAL GLU THR ILE ASP ALA ASP SEQRES 8 C 358 HIS ALA HIS GLY ALA ARG ALA THR TYR ALA ALA MET GLU SEQRES 9 C 358 ASN ALA MET ALA LEU ALA GLU LYS PHE GLY ILE GLY ALA SEQRES 10 C 358 VAL ALA ILE ARG ASN SER SER HIS PHE GLY PRO ALA GLY SEQRES 11 C 358 ALA TYR ALA LEU GLU ALA ALA ARG GLN GLY TYR ILE GLY SEQRES 12 C 358 LEU ALA PHE CYS ASN SER ASP SER PHE VAL ARG LEU HIS SEQRES 13 C 358 ASP GLY ALA MET ARG PHE HIS GLY THR ASN PRO ILE ALA SEQRES 14 C 358 VAL GLY VAL PRO ALA ALA ASP ASP MET PRO TRP LEU LEU SEQRES 15 C 358 ASP MET ALA THR SER ALA VAL PRO TYR ASN ARG VAL LEU SEQRES 16 C 358 LEU TYR ARG SER LEU GLY GLN GLN LEU PRO GLN GLY VAL SEQRES 17 C 358 ALA SER ASP GLY ASP GLY VAL ASP THR ARG ASP PRO ASN SEQRES 18 C 358 ALA VAL GLU MET LEU ALA PRO VAL GLY GLY GLU PHE GLY SEQRES 19 C 358 PHE LYS GLY ALA ALA LEU ALA GLY VAL VAL GLU ILE PHE SEQRES 20 C 358 SER ALA VAL LEU THR GLY MET ARG LEU SER PHE ASP LEU SEQRES 21 C 358 ALA PRO MET GLY GLY PRO ASP PHE SER THR PRO ARG GLY SEQRES 22 C 358 LEU GLY ALA PHE VAL LEU ALA LEU LYS PRO GLU ALA PHE SEQRES 23 C 358 LEU GLU ARG ASP VAL PHE ASP GLU SER MET LYS ARG TYR SEQRES 24 C 358 LEU GLU VAL LEU ARG GLY SER PRO ALA ARG GLU ASP CYS SEQRES 25 C 358 LYS VAL MET ALA PRO GLY ASP ARG GLU TRP ALA VAL ALA SEQRES 26 C 358 ALA LYS ARG GLU ARG GLU GLY ALA PRO VAL ASP PRO VAL SEQRES 27 C 358 THR ARG ALA ALA PHE SER GLU LEU ALA GLU LYS PHE SER SEQRES 28 C 358 VAL SER PRO PRO THR TYR HIS SEQRES 1 D 358 MET ALA HIS GLY ASN GLU LYS ALA THR VAL LEU ALA ARG SEQRES 2 D 358 LEU ASP GLU LEU GLU ARG PHE CYS ARG ALA VAL PHE LEU SEQRES 3 D 358 ALA VAL GLY THR ASP GLU GLU THR ALA ASP ALA ALA THR SEQRES 4 D 358 ARG ALA MET MET HIS GLY THR ARG LEU GLY VAL ASP SER SEQRES 5 D 358 HIS GLY VAL ARG LEU LEU ALA HIS TYR VAL THR ALA LEU SEQRES 6 D 358 GLU GLY GLY ARG LEU ASN ARG ARG PRO GLN ILE SER ARG SEQRES 7 D 358 VAL SER GLY PHE GLY ALA VAL GLU THR ILE ASP ALA ASP SEQRES 8 D 358 HIS ALA HIS GLY ALA ARG ALA THR TYR ALA ALA MET GLU SEQRES 9 D 358 ASN ALA MET ALA LEU ALA GLU LYS PHE GLY ILE GLY ALA SEQRES 10 D 358 VAL ALA ILE ARG ASN SER SER HIS PHE GLY PRO ALA GLY SEQRES 11 D 358 ALA TYR ALA LEU GLU ALA ALA ARG GLN GLY TYR ILE GLY SEQRES 12 D 358 LEU ALA PHE CYS ASN SER ASP SER PHE VAL ARG LEU HIS SEQRES 13 D 358 ASP GLY ALA MET ARG PHE HIS GLY THR ASN PRO ILE ALA SEQRES 14 D 358 VAL GLY VAL PRO ALA ALA ASP ASP MET PRO TRP LEU LEU SEQRES 15 D 358 ASP MET ALA THR SER ALA VAL PRO TYR ASN ARG VAL LEU SEQRES 16 D 358 LEU TYR ARG SER LEU GLY GLN GLN LEU PRO GLN GLY VAL SEQRES 17 D 358 ALA SER ASP GLY ASP GLY VAL ASP THR ARG ASP PRO ASN SEQRES 18 D 358 ALA VAL GLU MET LEU ALA PRO VAL GLY GLY GLU PHE GLY SEQRES 19 D 358 PHE LYS GLY ALA ALA LEU ALA GLY VAL VAL GLU ILE PHE SEQRES 20 D 358 SER ALA VAL LEU THR GLY MET ARG LEU SER PHE ASP LEU SEQRES 21 D 358 ALA PRO MET GLY GLY PRO ASP PHE SER THR PRO ARG GLY SEQRES 22 D 358 LEU GLY ALA PHE VAL LEU ALA LEU LYS PRO GLU ALA PHE SEQRES 23 D 358 LEU GLU ARG ASP VAL PHE ASP GLU SER MET LYS ARG TYR SEQRES 24 D 358 LEU GLU VAL LEU ARG GLY SER PRO ALA ARG GLU ASP CYS SEQRES 25 D 358 LYS VAL MET ALA PRO GLY ASP ARG GLU TRP ALA VAL ALA SEQRES 26 D 358 ALA LYS ARG GLU ARG GLU GLY ALA PRO VAL ASP PRO VAL SEQRES 27 D 358 THR ARG ALA ALA PHE SER GLU LEU ALA GLU LYS PHE SER SEQRES 28 D 358 VAL SER PRO PRO THR TYR HIS HET NAD A 700 44 HET NAD B 701 44 HET NAD C 702 44 HET NAD D 703 44 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE FORMUL 5 NAD 4(C21 H27 N7 O14 P2) FORMUL 9 HOH *699(H2 O) HELIX 1 1 ARG A 13 VAL A 28 1 16 HELIX 2 2 ASP A 31 LEU A 48 1 18 HELIX 3 3 VAL A 50 ARG A 56 5 7 HELIX 4 4 LEU A 57 GLY A 67 1 11 HELIX 5 5 HIS A 94 GLY A 114 1 21 HELIX 6 6 ALA A 129 GLN A 139 1 11 HELIX 7 7 TYR A 191 GLY A 201 1 11 HELIX 8 8 GLY A 230 GLU A 232 5 3 HELIX 9 9 PHE A 233 ALA A 249 1 17 HELIX 10 10 LEU A 256 LEU A 260 5 5 HELIX 11 11 PRO A 283 PHE A 286 5 4 HELIX 12 12 GLU A 288 SER A 306 1 19 HELIX 13 13 GLY A 318 GLU A 331 1 14 HELIX 14 14 ASP A 336 SER A 351 1 16 HELIX 15 15 ARG B 13 VAL B 28 1 16 HELIX 16 16 ASP B 31 LEU B 48 1 18 HELIX 17 17 VAL B 50 ARG B 56 5 7 HELIX 18 18 LEU B 57 GLY B 67 1 11 HELIX 19 19 HIS B 94 GLY B 114 1 21 HELIX 20 20 ALA B 129 GLY B 140 1 12 HELIX 21 21 TYR B 191 GLY B 201 1 11 HELIX 22 22 GLY B 230 PHE B 233 5 4 HELIX 23 23 GLY B 234 ALA B 249 1 16 HELIX 24 24 LEU B 256 LEU B 260 5 5 HELIX 25 25 PRO B 283 PHE B 286 5 4 HELIX 26 26 GLU B 288 GLY B 305 1 18 HELIX 27 27 GLY B 318 GLU B 331 1 14 HELIX 28 28 ASP B 336 SER B 351 1 16 HELIX 29 29 ARG C 13 VAL C 28 1 16 HELIX 30 30 ASP C 31 LEU C 48 1 18 HELIX 31 31 VAL C 50 ARG C 56 5 7 HELIX 32 32 LEU C 57 GLY C 67 1 11 HELIX 33 33 HIS C 94 GLY C 114 1 21 HELIX 34 34 ALA C 129 GLN C 139 1 11 HELIX 35 35 TYR C 191 GLY C 201 1 11 HELIX 36 36 GLY C 230 GLU C 232 5 3 HELIX 37 37 PHE C 233 ALA C 249 1 17 HELIX 38 38 LEU C 256 LEU C 260 5 5 HELIX 39 39 PRO C 283 PHE C 286 5 4 HELIX 40 40 GLU C 288 SER C 306 1 19 HELIX 41 41 GLY C 318 GLU C 331 1 14 HELIX 42 42 ASP C 336 SER C 351 1 16 HELIX 43 43 ARG D 13 VAL D 28 1 16 HELIX 44 44 ASP D 31 LEU D 48 1 18 HELIX 45 45 VAL D 50 ARG D 56 5 7 HELIX 46 46 LEU D 57 GLY D 68 1 12 HELIX 47 47 HIS D 94 GLY D 114 1 21 HELIX 48 48 ALA D 129 GLY D 140 1 12 HELIX 49 49 TYR D 191 GLY D 201 1 11 HELIX 50 50 GLY D 230 PHE D 233 5 4 HELIX 51 51 GLY D 234 ALA D 249 1 16 HELIX 52 52 LEU D 256 LEU D 260 5 5 HELIX 53 53 PRO D 283 PHE D 286 5 4 HELIX 54 54 GLU D 288 GLY D 305 1 18 HELIX 55 55 GLY D 318 GLU D 331 1 14 HELIX 56 56 ASP D 336 SER D 351 1 16 SHEET 1 A 3 ALA A 333 VAL A 335 0 SHEET 2 A 3 VAL A 10 ALA A 12 -1 N VAL A 10 O VAL A 335 SHEET 3 A 3 TYR A 357 HIS A 358 -1 O HIS A 358 N LEU A 11 SHEET 1 B 7 SER A 77 SER A 80 0 SHEET 2 B 7 VAL A 85 ASP A 89 -1 O ASP A 89 N SER A 77 SHEET 3 B 7 ILE A 115 SER A 123 1 O ALA A 119 N ILE A 88 SHEET 4 B 7 LEU A 274 LEU A 281 -1 O LEU A 274 N SER A 123 SHEET 5 B 7 ILE A 142 CYS A 147 -1 N PHE A 146 O PHE A 277 SHEET 6 B 7 ILE A 168 VAL A 172 -1 O GLY A 171 N GLY A 143 SHEET 7 B 7 TRP A 180 MET A 184 -1 O TRP A 180 N VAL A 172 SHEET 1 C 2 ALA A 209 SER A 210 0 SHEET 2 C 2 MET A 225 LEU A 226 -1 O MET A 225 N SER A 210 SHEET 1 D 3 ALA B 333 VAL B 335 0 SHEET 2 D 3 VAL B 10 ALA B 12 -1 N VAL B 10 O VAL B 335 SHEET 3 D 3 TYR B 357 HIS B 358 -1 O HIS B 358 N LEU B 11 SHEET 1 E 7 SER B 77 SER B 80 0 SHEET 2 E 7 VAL B 85 ASP B 89 -1 O ASP B 89 N SER B 77 SHEET 3 E 7 ILE B 115 SER B 123 1 O ARG B 121 N ILE B 88 SHEET 4 E 7 LEU B 274 LEU B 281 -1 O LEU B 274 N SER B 123 SHEET 5 E 7 ILE B 142 CYS B 147 -1 N LEU B 144 O LEU B 279 SHEET 6 E 7 ILE B 168 VAL B 172 -1 O GLY B 171 N GLY B 143 SHEET 7 E 7 TRP B 180 MET B 184 -1 O LEU B 182 N VAL B 170 SHEET 1 F 2 ALA B 209 SER B 210 0 SHEET 2 F 2 MET B 225 LEU B 226 -1 O MET B 225 N SER B 210 SHEET 1 G 3 ALA C 333 VAL C 335 0 SHEET 2 G 3 VAL C 10 ALA C 12 -1 N VAL C 10 O VAL C 335 SHEET 3 G 3 TYR C 357 HIS C 358 -1 O HIS C 358 N LEU C 11 SHEET 1 H 7 SER C 77 SER C 80 0 SHEET 2 H 7 VAL C 85 ASP C 89 -1 O ASP C 89 N SER C 77 SHEET 3 H 7 ILE C 115 SER C 123 1 O ALA C 119 N ILE C 88 SHEET 4 H 7 LEU C 274 LEU C 281 -1 O LEU C 274 N SER C 123 SHEET 5 H 7 ILE C 142 CYS C 147 -1 N PHE C 146 O PHE C 277 SHEET 6 H 7 ILE C 168 VAL C 172 -1 O GLY C 171 N GLY C 143 SHEET 7 H 7 TRP C 180 MET C 184 -1 O LEU C 182 N VAL C 170 SHEET 1 I 2 ALA C 209 SER C 210 0 SHEET 2 I 2 MET C 225 LEU C 226 -1 O MET C 225 N SER C 210 SHEET 1 J 3 ALA D 333 VAL D 335 0 SHEET 2 J 3 VAL D 10 ALA D 12 -1 N VAL D 10 O VAL D 335 SHEET 3 J 3 TYR D 357 HIS D 358 -1 O HIS D 358 N LEU D 11 SHEET 1 K 7 SER D 77 SER D 80 0 SHEET 2 K 7 VAL D 85 ASP D 89 -1 O ASP D 89 N SER D 77 SHEET 3 K 7 ILE D 115 SER D 123 1 O ARG D 121 N ILE D 88 SHEET 4 K 7 LEU D 274 LEU D 281 -1 O LEU D 274 N SER D 123 SHEET 5 K 7 ILE D 142 CYS D 147 -1 N PHE D 146 O PHE D 277 SHEET 6 K 7 ILE D 168 VAL D 172 -1 O GLY D 171 N GLY D 143 SHEET 7 K 7 TRP D 180 MET D 184 -1 O LEU D 182 N VAL D 170 SHEET 1 L 2 ALA D 209 SER D 210 0 SHEET 2 L 2 MET D 225 LEU D 226 -1 O MET D 225 N SER D 210 CISPEP 1 GLY A 265 PRO A 266 0 -0.10 CISPEP 2 GLY B 265 PRO B 266 0 0.02 CISPEP 3 GLY C 265 PRO C 266 0 -0.10 CISPEP 4 GLY D 265 PRO D 266 0 -0.48 SITE 1 AC1 24 VAL A 50 HIS A 53 HIS A 125 PHE A 126 SITE 2 AC1 24 GLY A 127 PRO A 128 ALA A 129 CYS A 147 SITE 3 AC1 24 THR A 165 PRO A 167 LEU A 182 ASP A 183 SITE 4 AC1 24 MET A 184 ALA A 185 PRO A 190 MET A 315 SITE 5 AC1 24 GLY A 318 ARG A 320 GLU A 321 HOH A 769 SITE 6 AC1 24 HOH A 810 HOH A 835 PHE B 235 LYS B 236 SITE 1 AC2 29 PHE A 235 LYS A 236 VAL B 50 HIS B 53 SITE 2 AC2 29 HIS B 125 PHE B 126 GLY B 127 PRO B 128 SITE 3 AC2 29 ALA B 129 CYS B 147 THR B 165 PRO B 167 SITE 4 AC2 29 LEU B 182 ASP B 183 MET B 184 ALA B 185 SITE 5 AC2 29 PRO B 190 MET B 315 GLY B 318 ARG B 320 SITE 6 AC2 29 GLU B 321 HOH B 734 HOH B 750 HOH B 764 SITE 7 AC2 29 HOH B 770 HOH B 774 HOH B 779 HOH B 809 SITE 8 AC2 29 HOH B 852 SITE 1 AC3 23 VAL C 50 HIS C 53 HIS C 125 PHE C 126 SITE 2 AC3 23 GLY C 127 PRO C 128 ALA C 129 CYS C 147 SITE 3 AC3 23 THR C 165 PRO C 167 LEU C 182 ASP C 183 SITE 4 AC3 23 MET C 184 ALA C 185 PRO C 190 MET C 315 SITE 5 AC3 23 GLY C 318 ARG C 320 GLU C 321 HOH C 756 SITE 6 AC3 23 HOH C 795 PHE D 235 LYS D 236 SITE 1 AC4 24 PHE C 235 LYS C 236 VAL D 50 HIS D 53 SITE 2 AC4 24 HIS D 125 PHE D 126 GLY D 127 PRO D 128 SITE 3 AC4 24 ALA D 129 CYS D 147 THR D 165 PRO D 167 SITE 4 AC4 24 LEU D 182 ASP D 183 MET D 184 ALA D 185 SITE 5 AC4 24 PRO D 190 MET D 315 GLY D 318 ARG D 320 SITE 6 AC4 24 GLU D 321 HOH D 710 HOH D 716 HOH D 842 CRYST1 98.220 98.220 146.470 90.00 90.00 120.00 P 31 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010181 0.005878 0.000000 0.00000 SCALE2 0.000000 0.011756 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006827 0.00000 MASTER 360 0 4 56 48 0 26 6 0 0 0 112 END