HEADER ISOMERASE 24-FEB-05 1YYA TITLE CRYSTAL STRUCTURE OF TT0473, PUTATIVE TRIOSEPHOSPHATE ISOMERASE FROM TITLE 2 THERMUS THERMOPHILUS HB8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRIOSEPHOSPHATE ISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PUTATIVE TRIOSEPHOSPHATE ISOMERASE; COMPND 5 EC: 5.3.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET11A KEYWDS TRIOSEPHOSPHATE ISOMERASE, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 2 INITIATIVE, RSGI, STRUCTURAL GENOMICS, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.YAMAMOTO,N.KUNISHIMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 3 13-JUL-11 1YYA 1 VERSN REVDAT 2 24-FEB-09 1YYA 1 VERSN REVDAT 1 15-MAR-05 1YYA 0 JRNL AUTH H.YAMAMOTO,N.KUNISHIMA JRNL TITL CRYSTAL STRUCTURE OF TT0473, PUTATIVE TRIOSEPHOSPHATE JRNL TITL 2 ISOMERASE FROM THERMUS THERMOPHILUS HB8 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 82250 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 4160 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.70 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2160 REMARK 3 BIN FREE R VALUE : 0.2350 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 679 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.009 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3816 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 37 REMARK 3 SOLVENT ATOMS : 751 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.69 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.74000 REMARK 3 B22 (A**2) : -1.30000 REMARK 3 B33 (A**2) : 5.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.16 REMARK 3 ESD FROM SIGMAA (A) : 0.12 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.17 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.15 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.50 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.89 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1YYA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-FEB-05. REMARK 100 THE RCSB ID CODE IS RCSB032064. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-DEC-04 REMARK 200 TEMPERATURE (KELVIN) : 103 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS V REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 82497 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : 0.04800 REMARK 200 FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.36300 REMARK 200 R SYM FOR SHELL (I) : 0.32000 REMARK 200 FOR SHELL : 4.790 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG4000, SODIUM CITRATE, TRIS, SODIUM REMARK 280 CHLORIDE, PH 5.6, MICROBATCH, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y,-Z REMARK 290 8555 X,-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.80600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.33850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 59.19100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.33850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.80600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 59.19100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 43.80600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 59.19100 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 60.33850 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 59.19100 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 43.80600 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 60.33850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER IN ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -88.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2297 LIES ON A SPECIAL POSITION. REMARK 375 HOH B2291 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 11 -144.76 55.63 REMARK 500 LYS A 14 163.80 71.82 REMARK 500 LYS B 11 -145.12 56.92 REMARK 500 LYS B 14 167.74 70.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2265 DISTANCE = 5.79 ANGSTROMS REMARK 525 HOH A2275 DISTANCE = 5.08 ANGSTROMS REMARK 525 HOH A2286 DISTANCE = 5.68 ANGSTROMS REMARK 525 HOH A2287 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH A2316 DISTANCE = 5.07 ANGSTROMS REMARK 525 HOH A2327 DISTANCE = 5.02 ANGSTROMS REMARK 525 HOH A2335 DISTANCE = 5.42 ANGSTROMS REMARK 525 HOH A2359 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A2369 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH A2376 DISTANCE = 5.36 ANGSTROMS REMARK 525 HOH A2379 DISTANCE = 5.05 ANGSTROMS REMARK 525 HOH A2389 DISTANCE = 5.21 ANGSTROMS REMARK 525 HOH B2287 DISTANCE = 5.04 ANGSTROMS REMARK 525 HOH B2314 DISTANCE = 5.13 ANGSTROMS REMARK 525 HOH B2350 DISTANCE = 5.39 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1001 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 222 O REMARK 620 2 HOH A2170 O 83.1 REMARK 620 3 MET A 224 O 93.1 87.9 REMARK 620 4 VAL A 227 O 104.9 171.7 89.8 REMARK 620 5 HOH A2137 O 168.1 95.7 98.6 76.8 REMARK 620 6 HOH A2075 O 94.1 88.4 171.4 92.7 74.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B1002 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL B 227 O REMARK 620 2 HOH B2132 O 77.5 REMARK 620 3 HOH B2133 O 94.1 74.9 REMARK 620 4 HOH B2234 O 169.8 92.6 85.9 REMARK 620 5 LEU B 222 O 101.7 170.0 95.4 88.5 REMARK 620 6 MET B 224 O 89.6 98.7 171.6 89.2 91.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 2005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 2006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 2007 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: TTK003000473.1 RELATED DB: TARGETDB DBREF 1YYA A 1 250 UNP Q5SJR1 Q5SJR1_THET8 1 250 DBREF 1YYA B 1 250 UNP Q5SJR1 Q5SJR1_THET8 1 250 SEQRES 1 A 250 MET ARG ARG VAL LEU VAL ALA GLY ASN TRP LYS MET HIS SEQRES 2 A 250 LYS THR PRO SER GLU ALA ARG VAL TRP PHE ALA GLU LEU SEQRES 3 A 250 LYS ARG LEU LEU PRO PRO LEU GLN SER GLU ALA ALA VAL SEQRES 4 A 250 LEU PRO ALA PHE PRO ILE LEU PRO VAL ALA LYS GLU VAL SEQRES 5 A 250 LEU ALA GLU THR GLN VAL GLY TYR GLY ALA GLN ASP VAL SEQRES 6 A 250 SER ALA HIS LYS GLU GLY ALA TYR THR GLY GLU VAL SER SEQRES 7 A 250 ALA ARG MET LEU SER ASP LEU GLY CYS ARG TYR ALA ILE SEQRES 8 A 250 VAL GLY HIS SER GLU ARG ARG ARG TYR HIS GLY GLU THR SEQRES 9 A 250 ASP ALA LEU VAL ALA GLU LYS ALA LYS ARG LEU LEU GLU SEQRES 10 A 250 GLU GLY ILE THR PRO ILE LEU CYS VAL GLY GLU PRO LEU SEQRES 11 A 250 GLU VAL ARG GLU LYS GLY GLU ALA VAL PRO TYR THR LEU SEQRES 12 A 250 ARG GLN LEU ARG GLY SER LEU GLU GLY VAL GLU PRO PRO SEQRES 13 A 250 GLY PRO GLU ALA LEU VAL ILE ALA TYR GLU PRO VAL TRP SEQRES 14 A 250 ALA ILE GLY THR GLY LYS ASN ALA THR PRO GLU ASP ALA SEQRES 15 A 250 GLU ALA MET HIS GLN ALA ILE ARG LYS ALA LEU SER GLU SEQRES 16 A 250 ARG TYR GLY GLU ALA PHE ALA SER ARG VAL ARG ILE LEU SEQRES 17 A 250 TYR GLY GLY SER VAL ASN PRO LYS ASN PHE ALA ASP LEU SEQRES 18 A 250 LEU SER MET PRO ASN VAL ASP GLY GLY LEU VAL GLY GLY SEQRES 19 A 250 ALA SER LEU GLU LEU GLU SER PHE LEU ALA LEU LEU ARG SEQRES 20 A 250 ILE ALA GLY SEQRES 1 B 250 MET ARG ARG VAL LEU VAL ALA GLY ASN TRP LYS MET HIS SEQRES 2 B 250 LYS THR PRO SER GLU ALA ARG VAL TRP PHE ALA GLU LEU SEQRES 3 B 250 LYS ARG LEU LEU PRO PRO LEU GLN SER GLU ALA ALA VAL SEQRES 4 B 250 LEU PRO ALA PHE PRO ILE LEU PRO VAL ALA LYS GLU VAL SEQRES 5 B 250 LEU ALA GLU THR GLN VAL GLY TYR GLY ALA GLN ASP VAL SEQRES 6 B 250 SER ALA HIS LYS GLU GLY ALA TYR THR GLY GLU VAL SER SEQRES 7 B 250 ALA ARG MET LEU SER ASP LEU GLY CYS ARG TYR ALA ILE SEQRES 8 B 250 VAL GLY HIS SER GLU ARG ARG ARG TYR HIS GLY GLU THR SEQRES 9 B 250 ASP ALA LEU VAL ALA GLU LYS ALA LYS ARG LEU LEU GLU SEQRES 10 B 250 GLU GLY ILE THR PRO ILE LEU CYS VAL GLY GLU PRO LEU SEQRES 11 B 250 GLU VAL ARG GLU LYS GLY GLU ALA VAL PRO TYR THR LEU SEQRES 12 B 250 ARG GLN LEU ARG GLY SER LEU GLU GLY VAL GLU PRO PRO SEQRES 13 B 250 GLY PRO GLU ALA LEU VAL ILE ALA TYR GLU PRO VAL TRP SEQRES 14 B 250 ALA ILE GLY THR GLY LYS ASN ALA THR PRO GLU ASP ALA SEQRES 15 B 250 GLU ALA MET HIS GLN ALA ILE ARG LYS ALA LEU SER GLU SEQRES 16 B 250 ARG TYR GLY GLU ALA PHE ALA SER ARG VAL ARG ILE LEU SEQRES 17 B 250 TYR GLY GLY SER VAL ASN PRO LYS ASN PHE ALA ASP LEU SEQRES 18 B 250 LEU SER MET PRO ASN VAL ASP GLY GLY LEU VAL GLY GLY SEQRES 19 B 250 ALA SER LEU GLU LEU GLU SER PHE LEU ALA LEU LEU ARG SEQRES 20 B 250 ILE ALA GLY HET NA A1001 1 HET NA B1002 1 HET PO4 A2001 5 HET PO4 B2002 5 HET PO4 B2003 5 HET PO4 A2004 5 HET PO4 B2005 5 HET PO4 A2006 5 HET PO4 A2007 5 HETNAM NA SODIUM ION HETNAM PO4 PHOSPHATE ION FORMUL 3 NA 2(NA 1+) FORMUL 5 PO4 7(O4 P 3-) FORMUL 12 HOH *751(H2 O) HELIX 1 1 THR A 15 LEU A 30 1 16 HELIX 2 2 ALA A 42 PRO A 44 5 3 HELIX 3 3 ILE A 45 ALA A 54 1 10 HELIX 4 4 SER A 78 LEU A 85 1 8 HELIX 5 5 HIS A 94 HIS A 101 1 8 HELIX 6 6 THR A 104 GLU A 118 1 15 HELIX 7 7 PRO A 129 LYS A 135 1 7 HELIX 8 8 GLU A 137 LEU A 150 1 14 HELIX 9 9 GLY A 157 ALA A 160 5 4 HELIX 10 10 PRO A 167 ILE A 171 5 5 HELIX 11 11 THR A 178 GLY A 198 1 21 HELIX 12 12 GLY A 198 SER A 203 1 6 HELIX 13 13 ASN A 217 SER A 223 1 7 HELIX 14 14 GLY A 233 LEU A 237 5 5 HELIX 15 15 GLU A 238 GLY A 250 1 13 HELIX 16 16 THR B 15 LEU B 30 1 16 HELIX 17 17 ALA B 42 PRO B 44 5 3 HELIX 18 18 ILE B 45 ALA B 54 1 10 HELIX 19 19 SER B 78 LEU B 85 1 8 HELIX 20 20 HIS B 94 HIS B 101 1 8 HELIX 21 21 THR B 104 GLU B 118 1 15 HELIX 22 22 PRO B 129 LYS B 135 1 7 HELIX 23 23 GLU B 137 LEU B 150 1 14 HELIX 24 24 GLY B 157 ALA B 160 5 4 HELIX 25 25 PRO B 167 ILE B 171 5 5 HELIX 26 26 THR B 178 GLY B 198 1 21 HELIX 27 27 GLY B 198 SER B 203 1 6 HELIX 28 28 ASN B 217 SER B 223 1 7 HELIX 29 29 GLY B 233 LEU B 237 5 5 HELIX 30 30 GLU B 238 GLY B 250 1 13 SHEET 1 A 9 LEU A 5 ASN A 9 0 SHEET 2 A 9 GLU A 36 LEU A 40 1 O LEU A 40 N GLY A 8 SHEET 3 A 9 GLY A 59 ALA A 62 1 O GLY A 59 N ALA A 37 SHEET 4 A 9 TYR A 89 VAL A 92 1 O ILE A 91 N ALA A 62 SHEET 5 A 9 THR A 121 VAL A 126 1 O ILE A 123 N ALA A 90 SHEET 6 A 9 VAL A 162 TYR A 165 1 O ALA A 164 N LEU A 124 SHEET 7 A 9 ARG A 206 GLY A 210 1 O LEU A 208 N TYR A 165 SHEET 8 A 9 GLY A 229 VAL A 232 1 O GLY A 229 N TYR A 209 SHEET 9 A 9 LEU A 5 ASN A 9 1 N ASN A 9 O VAL A 232 SHEET 1 B 9 LEU B 5 ASN B 9 0 SHEET 2 B 9 GLU B 36 LEU B 40 1 O LEU B 40 N GLY B 8 SHEET 3 B 9 VAL B 58 ALA B 62 1 O GLY B 59 N ALA B 37 SHEET 4 B 9 TYR B 89 VAL B 92 1 O ILE B 91 N ALA B 62 SHEET 5 B 9 THR B 121 VAL B 126 1 O CYS B 125 N VAL B 92 SHEET 6 B 9 VAL B 162 TYR B 165 1 O ALA B 164 N LEU B 124 SHEET 7 B 9 ARG B 206 GLY B 210 1 O LEU B 208 N TYR B 165 SHEET 8 B 9 GLY B 229 VAL B 232 1 O GLY B 229 N TYR B 209 SHEET 9 B 9 LEU B 5 ASN B 9 1 N ALA B 7 O VAL B 232 LINK NA NA A1001 O LEU A 222 1555 1555 2.39 LINK NA NA A1001 O HOH A2170 1555 1555 2.51 LINK NA NA A1001 O MET A 224 1555 1555 2.44 LINK NA NA A1001 O VAL A 227 1555 1555 2.38 LINK NA NA A1001 O HOH A2137 1555 1555 2.58 LINK NA NA A1001 O HOH A2075 1555 1555 2.46 LINK NA NA B1002 O VAL B 227 1555 1555 2.41 LINK NA NA B1002 O HOH B2132 1555 1555 2.39 LINK NA NA B1002 O HOH B2133 1555 1555 2.37 LINK NA NA B1002 O HOH B2234 1555 1555 2.45 LINK NA NA B1002 O LEU B 222 1555 1555 2.47 LINK NA NA B1002 O MET B 224 1555 1555 2.46 SITE 1 AC1 6 LEU A 222 MET A 224 VAL A 227 HOH A2075 SITE 2 AC1 6 HOH A2137 HOH A2170 SITE 1 AC2 6 LEU B 222 MET B 224 VAL B 227 HOH B2132 SITE 2 AC2 6 HOH B2133 HOH B2234 SITE 1 AC3 8 SER A 17 ARG A 20 HOH A2041 HOH A2050 SITE 2 AC3 8 HOH A2091 HOH A2274 HOH A2345 HOH A2395 SITE 1 AC4 7 HOH A2077 SER B 17 ARG B 20 HOH B2039 SITE 2 AC4 7 HOH B2273 HOH B2347 HOH B2348 SITE 1 AC5 6 GLU A 70 ARG A 80 HIS B 13 LYS B 14 SITE 2 AC5 6 HOH B2026 HOH B2366 SITE 1 AC6 11 ALA A 170 ILE A 171 GLY A 172 SER A 212 SITE 2 AC6 11 GLY A 233 GLY A 234 HOH A2017 HOH A2054 SITE 3 AC6 11 HOH A2055 HOH A2271 HOH A2309 SITE 1 AC7 10 ILE B 171 GLY B 172 SER B 212 GLY B 233 SITE 2 AC7 10 GLY B 234 HOH B2030 HOH B2037 HOH B2054 SITE 3 AC7 10 HOH B2208 HOH B2275 SITE 1 AC8 5 HIS A 68 LYS A 69 GLU A 70 HOH A2099 SITE 2 AC8 5 HOH A2396 SITE 1 AC9 4 HIS A 13 LYS A 14 HOH A2033 ARG B 80 CRYST1 87.612 118.382 120.677 90.00 90.00 90.00 I 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011414 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008447 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008287 0.00000 MASTER 353 0 9 30 18 0 19 6 0 0 0 40 END