HEADER TRANSFERASE 02-FEB-05 1YR0 TITLE CRYSTAL STRUCTURE OF PHOSPHINOTHRICIN ACETYLTRANSFERASE FROM TITLE 2 AGROBACTERIUM TUMEFACIENS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHINOTHRICIN ACETYLTRANSFERASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: AGR_C_1654P; COMPND 5 EC: 2.3.1.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM TUMEFACIENS STR.; SOURCE 3 ORGANISM_TAXID: 176299; SOURCE 4 STRAIN: C58; SOURCE 5 GENE: AGR_C_1654; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B834 DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET T7 KEYWDS STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, NYSGXRC, T1682, KEYWDS 2 AGR_C_1654, PHOSPHINOTHRICIN ACETYLTRANSFERASE, PSI, NEW YORK SGX KEYWDS 3 RESEARCH CENTER FOR STRUCTURAL GENOMICS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.K.BURLEY,NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS AUTHOR 2 (NYSGXRC) REVDAT 5 03-FEB-21 1YR0 1 AUTHOR REMARK SEQADV LINK REVDAT 4 16-NOV-11 1YR0 1 HETATM REVDAT 3 13-JUL-11 1YR0 1 VERSN REVDAT 2 24-FEB-09 1YR0 1 VERSN REVDAT 1 15-FEB-05 1YR0 0 JRNL AUTH K.R.RAJASHANKAR,R.KNIEWEL,K.LEE,C.D.LIMA JRNL TITL CRYSTAL STRUCTURE OF PHOSPHINOTHRICIN ACETYLTRANSFERASE FROM JRNL TITL 2 AGROBACTERIUM TUMEFACIENS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 206520.390 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 45071 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 4214 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 12844 REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE : 0.2840 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 626 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.011 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5136 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 823 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 9.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.89000 REMARK 3 B22 (A**2) : 0.19000 REMARK 3 B33 (A**2) : -1.07000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -4.02000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM SIGMAA (A) : 0.20 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.23 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.100 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.600 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.190 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.780 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.080 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.870 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 53.38 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NO ELECTRON DENSITY IS OBSERVED FOR REMARK 3 FIRST THREE RESIDUES AND LAST NINE RESUDES IN ALL PROTOMERS. REMARK 3 THESE RESIDUES ARE ASSUMED TO BE DISORDERED REMARK 4 REMARK 4 1YR0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-FEB-05. REMARK 100 THE DEPOSITION ID IS D_1000031830. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JAN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X9A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9790 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : VERTICAL FOCUSSING MIRROR DOWN REMARK 200 STREAM OF MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 89254 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 19.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 2.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07500 REMARK 200 FOR THE DATA SET : 10.4500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.32400 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: MODEL BUILT BASED ON DENSITY MODIFIED AND NCS REMARK 200 AVERAGED EXPERIMENTAL ELECTRON DENSITY MAP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.5M AMMONIUM SULFATE, 0.1M HEPES PH REMARK 280 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 36.92450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.24500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 36.92450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 32.24500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: PROTOMERS A AND B FORM ONE BIOLOGICAL UNIT AND PROTOMERS C REMARK 300 AND D FORM ANOTHER BIOLOGICAL UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B1219 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 SER A 2 REMARK 465 LEU A 3 REMARK 465 GLY A 167 REMARK 465 GLU A 168 REMARK 465 GLY A 169 REMARK 465 HIS A 170 REMARK 465 HIS A 171 REMARK 465 HIS A 172 REMARK 465 HIS A 173 REMARK 465 HIS A 174 REMARK 465 HIS A 175 REMARK 465 MSE B 1 REMARK 465 SER B 2 REMARK 465 LEU B 3 REMARK 465 GLY B 167 REMARK 465 GLU B 168 REMARK 465 GLY B 169 REMARK 465 HIS B 170 REMARK 465 HIS B 171 REMARK 465 HIS B 172 REMARK 465 HIS B 173 REMARK 465 HIS B 174 REMARK 465 HIS B 175 REMARK 465 MSE C 1 REMARK 465 SER C 2 REMARK 465 LEU C 3 REMARK 465 GLY C 167 REMARK 465 GLU C 168 REMARK 465 GLY C 169 REMARK 465 HIS C 170 REMARK 465 HIS C 171 REMARK 465 HIS C 172 REMARK 465 HIS C 173 REMARK 465 HIS C 174 REMARK 465 HIS C 175 REMARK 465 MSE D 1 REMARK 465 SER D 2 REMARK 465 LEU D 3 REMARK 465 GLY D 167 REMARK 465 GLU D 168 REMARK 465 GLY D 169 REMARK 465 HIS D 170 REMARK 465 HIS D 171 REMARK 465 HIS D 172 REMARK 465 HIS D 173 REMARK 465 HIS D 174 REMARK 465 HIS D 175 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN D 42 ND2 ASN D 42 2656 1.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 77 69.85 -68.53 REMARK 500 ALA D 77 45.28 -70.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 1005 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-T1682 RELATED DB: TARGETDB DBREF 1YR0 A 1 167 UNP Q8UGX8 Q8UGX8_AGRT5 1 165 DBREF 1YR0 B 1 167 UNP Q8UGX8 Q8UGX8_AGRT5 1 165 DBREF 1YR0 C 1 167 UNP Q8UGX8 Q8UGX8_AGRT5 1 165 DBREF 1YR0 D 1 167 UNP Q8UGX8 Q8UGX8_AGRT5 1 165 SEQADV 1YR0 MSE A 1 UNP Q8UGX8 MET 1 MODIFIED RESIDUE SEQADV 1YR0 SER A 2 UNP Q8UGX8 INSERTION SEQADV 1YR0 LEU A 3 UNP Q8UGX8 INSERTION SEQADV 1YR0 MSE A 19 UNP Q8UGX8 MET 17 MODIFIED RESIDUE SEQADV 1YR0 MSE A 105 UNP Q8UGX8 MET 103 MODIFIED RESIDUE SEQADV 1YR0 MSE A 162 UNP Q8UGX8 MET 160 MODIFIED RESIDUE SEQADV 1YR0 GLU A 168 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 GLY A 169 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS A 170 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS A 171 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS A 172 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS A 173 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS A 174 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS A 175 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 MSE B 1 UNP Q8UGX8 MET 1 MODIFIED RESIDUE SEQADV 1YR0 SER B 2 UNP Q8UGX8 INSERTION SEQADV 1YR0 LEU B 3 UNP Q8UGX8 INSERTION SEQADV 1YR0 MSE B 19 UNP Q8UGX8 MET 17 MODIFIED RESIDUE SEQADV 1YR0 MSE B 105 UNP Q8UGX8 MET 103 MODIFIED RESIDUE SEQADV 1YR0 MSE B 162 UNP Q8UGX8 MET 160 MODIFIED RESIDUE SEQADV 1YR0 GLU B 168 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 GLY B 169 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS B 170 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS B 171 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS B 172 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS B 173 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS B 174 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS B 175 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 MSE C 1 UNP Q8UGX8 MET 1 MODIFIED RESIDUE SEQADV 1YR0 SER C 2 UNP Q8UGX8 INSERTION SEQADV 1YR0 LEU C 3 UNP Q8UGX8 INSERTION SEQADV 1YR0 MSE C 19 UNP Q8UGX8 MET 17 MODIFIED RESIDUE SEQADV 1YR0 MSE C 105 UNP Q8UGX8 MET 103 MODIFIED RESIDUE SEQADV 1YR0 MSE C 162 UNP Q8UGX8 MET 160 MODIFIED RESIDUE SEQADV 1YR0 GLU C 168 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 GLY C 169 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS C 170 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS C 171 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS C 172 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS C 173 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS C 174 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS C 175 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 MSE D 1 UNP Q8UGX8 MET 1 MODIFIED RESIDUE SEQADV 1YR0 SER D 2 UNP Q8UGX8 INSERTION SEQADV 1YR0 LEU D 3 UNP Q8UGX8 INSERTION SEQADV 1YR0 MSE D 19 UNP Q8UGX8 MET 17 MODIFIED RESIDUE SEQADV 1YR0 MSE D 105 UNP Q8UGX8 MET 103 MODIFIED RESIDUE SEQADV 1YR0 MSE D 162 UNP Q8UGX8 MET 160 MODIFIED RESIDUE SEQADV 1YR0 GLU D 168 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 GLY D 169 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS D 170 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS D 171 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS D 172 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS D 173 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS D 174 UNP Q8UGX8 EXPRESSION TAG SEQADV 1YR0 HIS D 175 UNP Q8UGX8 EXPRESSION TAG SEQRES 1 A 175 MSE SER LEU SER VAL GLU LEU ARG ASP ALA THR VAL ASP SEQRES 2 A 175 ASP LEU SER GLY ILE MSE GLU ILE TYR ASN ASP ALA VAL SEQRES 3 A 175 VAL ASN THR THR ALA ILE TRP ASN GLU VAL VAL VAL ASP SEQRES 4 A 175 LEU GLU ASN ARG LYS ASP TRP PHE ALA ALA ARG THR SER SEQRES 5 A 175 ARG GLY PHE PRO VAL ILE VAL ALA ILE LEU ASP GLY LYS SEQRES 6 A 175 VAL ALA GLY TYR ALA SER TYR GLY ASP TRP ARG ALA PHE SEQRES 7 A 175 ASP GLY TYR ARG HIS THR ARG GLU HIS SER VAL TYR VAL SEQRES 8 A 175 HIS LYS ASP ALA ARG GLY HIS GLY ILE GLY LYS ARG LEU SEQRES 9 A 175 MSE GLN ALA LEU ILE ASP HIS ALA GLY GLY ASN ASP VAL SEQRES 10 A 175 HIS VAL LEU ILE ALA ALA ILE GLU ALA GLU ASN THR ALA SEQRES 11 A 175 SER ILE ARG LEU HIS GLU SER LEU GLY PHE ARG VAL VAL SEQRES 12 A 175 GLY ARG PHE SER GLU VAL GLY THR LYS PHE GLY ARG TRP SEQRES 13 A 175 LEU ASP LEU THR CYS MSE GLU LEU LYS LEU GLY GLU GLY SEQRES 14 A 175 HIS HIS HIS HIS HIS HIS SEQRES 1 B 175 MSE SER LEU SER VAL GLU LEU ARG ASP ALA THR VAL ASP SEQRES 2 B 175 ASP LEU SER GLY ILE MSE GLU ILE TYR ASN ASP ALA VAL SEQRES 3 B 175 VAL ASN THR THR ALA ILE TRP ASN GLU VAL VAL VAL ASP SEQRES 4 B 175 LEU GLU ASN ARG LYS ASP TRP PHE ALA ALA ARG THR SER SEQRES 5 B 175 ARG GLY PHE PRO VAL ILE VAL ALA ILE LEU ASP GLY LYS SEQRES 6 B 175 VAL ALA GLY TYR ALA SER TYR GLY ASP TRP ARG ALA PHE SEQRES 7 B 175 ASP GLY TYR ARG HIS THR ARG GLU HIS SER VAL TYR VAL SEQRES 8 B 175 HIS LYS ASP ALA ARG GLY HIS GLY ILE GLY LYS ARG LEU SEQRES 9 B 175 MSE GLN ALA LEU ILE ASP HIS ALA GLY GLY ASN ASP VAL SEQRES 10 B 175 HIS VAL LEU ILE ALA ALA ILE GLU ALA GLU ASN THR ALA SEQRES 11 B 175 SER ILE ARG LEU HIS GLU SER LEU GLY PHE ARG VAL VAL SEQRES 12 B 175 GLY ARG PHE SER GLU VAL GLY THR LYS PHE GLY ARG TRP SEQRES 13 B 175 LEU ASP LEU THR CYS MSE GLU LEU LYS LEU GLY GLU GLY SEQRES 14 B 175 HIS HIS HIS HIS HIS HIS SEQRES 1 C 175 MSE SER LEU SER VAL GLU LEU ARG ASP ALA THR VAL ASP SEQRES 2 C 175 ASP LEU SER GLY ILE MSE GLU ILE TYR ASN ASP ALA VAL SEQRES 3 C 175 VAL ASN THR THR ALA ILE TRP ASN GLU VAL VAL VAL ASP SEQRES 4 C 175 LEU GLU ASN ARG LYS ASP TRP PHE ALA ALA ARG THR SER SEQRES 5 C 175 ARG GLY PHE PRO VAL ILE VAL ALA ILE LEU ASP GLY LYS SEQRES 6 C 175 VAL ALA GLY TYR ALA SER TYR GLY ASP TRP ARG ALA PHE SEQRES 7 C 175 ASP GLY TYR ARG HIS THR ARG GLU HIS SER VAL TYR VAL SEQRES 8 C 175 HIS LYS ASP ALA ARG GLY HIS GLY ILE GLY LYS ARG LEU SEQRES 9 C 175 MSE GLN ALA LEU ILE ASP HIS ALA GLY GLY ASN ASP VAL SEQRES 10 C 175 HIS VAL LEU ILE ALA ALA ILE GLU ALA GLU ASN THR ALA SEQRES 11 C 175 SER ILE ARG LEU HIS GLU SER LEU GLY PHE ARG VAL VAL SEQRES 12 C 175 GLY ARG PHE SER GLU VAL GLY THR LYS PHE GLY ARG TRP SEQRES 13 C 175 LEU ASP LEU THR CYS MSE GLU LEU LYS LEU GLY GLU GLY SEQRES 14 C 175 HIS HIS HIS HIS HIS HIS SEQRES 1 D 175 MSE SER LEU SER VAL GLU LEU ARG ASP ALA THR VAL ASP SEQRES 2 D 175 ASP LEU SER GLY ILE MSE GLU ILE TYR ASN ASP ALA VAL SEQRES 3 D 175 VAL ASN THR THR ALA ILE TRP ASN GLU VAL VAL VAL ASP SEQRES 4 D 175 LEU GLU ASN ARG LYS ASP TRP PHE ALA ALA ARG THR SER SEQRES 5 D 175 ARG GLY PHE PRO VAL ILE VAL ALA ILE LEU ASP GLY LYS SEQRES 6 D 175 VAL ALA GLY TYR ALA SER TYR GLY ASP TRP ARG ALA PHE SEQRES 7 D 175 ASP GLY TYR ARG HIS THR ARG GLU HIS SER VAL TYR VAL SEQRES 8 D 175 HIS LYS ASP ALA ARG GLY HIS GLY ILE GLY LYS ARG LEU SEQRES 9 D 175 MSE GLN ALA LEU ILE ASP HIS ALA GLY GLY ASN ASP VAL SEQRES 10 D 175 HIS VAL LEU ILE ALA ALA ILE GLU ALA GLU ASN THR ALA SEQRES 11 D 175 SER ILE ARG LEU HIS GLU SER LEU GLY PHE ARG VAL VAL SEQRES 12 D 175 GLY ARG PHE SER GLU VAL GLY THR LYS PHE GLY ARG TRP SEQRES 13 D 175 LEU ASP LEU THR CYS MSE GLU LEU LYS LEU GLY GLU GLY SEQRES 14 D 175 HIS HIS HIS HIS HIS HIS MODRES 1YR0 MSE A 19 MET SELENOMETHIONINE MODRES 1YR0 MSE A 105 MET SELENOMETHIONINE MODRES 1YR0 MSE A 162 MET SELENOMETHIONINE MODRES 1YR0 MSE B 19 MET SELENOMETHIONINE MODRES 1YR0 MSE B 105 MET SELENOMETHIONINE MODRES 1YR0 MSE B 162 MET SELENOMETHIONINE MODRES 1YR0 MSE C 19 MET SELENOMETHIONINE MODRES 1YR0 MSE C 105 MET SELENOMETHIONINE MODRES 1YR0 MSE C 162 MET SELENOMETHIONINE MODRES 1YR0 MSE D 19 MET SELENOMETHIONINE MODRES 1YR0 MSE D 105 MET SELENOMETHIONINE MODRES 1YR0 MSE D 162 MET SELENOMETHIONINE HET MSE A 19 8 HET MSE A 105 8 HET MSE A 162 8 HET MSE B 19 8 HET MSE B 105 8 HET MSE B 162 8 HET MSE C 19 8 HET MSE C 105 8 HET MSE C 162 8 HET MSE D 19 8 HET MSE D 105 8 HET MSE D 162 8 HET SO4 A1001 5 HET SO4 A1002 5 HET SO4 B1003 5 HET SO4 C1004 5 HET SO4 D1005 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 5 SO4 5(O4 S 2-) FORMUL 10 HOH *823(H2 O) HELIX 1 1 THR A 11 ASP A 13 5 3 HELIX 2 2 ASP A 14 THR A 29 1 16 HELIX 3 3 ASP A 39 GLY A 54 1 16 HELIX 4 4 PHE A 78 ARG A 82 5 5 HELIX 5 5 GLY A 99 GLY A 114 1 16 HELIX 6 6 ASN A 128 LEU A 138 1 11 HELIX 7 7 THR B 11 ASP B 13 5 3 HELIX 8 8 ASP B 14 THR B 29 1 16 HELIX 9 9 ASP B 39 ARG B 53 1 15 HELIX 10 10 PHE B 78 ARG B 82 5 5 HELIX 11 11 GLY B 99 GLY B 114 1 16 HELIX 12 12 ASN B 128 SER B 137 1 10 HELIX 13 13 THR C 11 ASP C 13 5 3 HELIX 14 14 ASP C 14 THR C 29 1 16 HELIX 15 15 ASP C 39 ARG C 53 1 15 HELIX 16 16 PHE C 78 ARG C 82 5 5 HELIX 17 17 GLY C 99 GLY C 114 1 16 HELIX 18 18 ASN C 128 SER C 137 1 10 HELIX 19 19 THR D 11 ASP D 13 5 3 HELIX 20 20 ASP D 14 THR D 29 1 16 HELIX 21 21 ASP D 39 ARG D 53 1 15 HELIX 22 22 PHE D 78 ARG D 82 5 5 HELIX 23 23 GLY D 99 ASN D 115 1 17 HELIX 24 24 ASN D 128 SER D 137 1 10 SHEET 1 A 7 GLU A 6 ASP A 9 0 SHEET 2 A 7 VAL A 57 LEU A 62 -1 O ILE A 61 N GLU A 6 SHEET 3 A 7 LYS A 65 ASP A 74 -1 O ALA A 67 N ALA A 60 SHEET 4 A 7 THR A 84 VAL A 91 -1 O TYR A 90 N TYR A 69 SHEET 5 A 7 VAL A 119 GLU A 125 1 O ILE A 121 N ARG A 85 SHEET 6 A 7 ARG A 155 LYS A 165 -1 O THR A 160 N ILE A 124 SHEET 7 A 7 ARG A 141 LYS A 152 -1 N PHE A 146 O LEU A 159 SHEET 1 B 7 GLU B 6 ASP B 9 0 SHEET 2 B 7 VAL B 57 LEU B 62 -1 O ILE B 61 N GLU B 6 SHEET 3 B 7 LYS B 65 ASP B 74 -1 O ALA B 67 N ALA B 60 SHEET 4 B 7 THR B 84 VAL B 91 -1 O TYR B 90 N TYR B 69 SHEET 5 B 7 VAL B 119 GLU B 125 1 O ILE B 121 N ARG B 85 SHEET 6 B 7 ARG B 155 LYS B 165 -1 O THR B 160 N ILE B 124 SHEET 7 B 7 ARG B 141 LYS B 152 -1 N PHE B 146 O LEU B 159 SHEET 1 C 7 GLU C 6 ASP C 9 0 SHEET 2 C 7 VAL C 57 LEU C 62 -1 O ILE C 61 N GLU C 6 SHEET 3 C 7 LYS C 65 ASP C 74 -1 O GLY C 68 N ALA C 60 SHEET 4 C 7 THR C 84 VAL C 91 -1 O SER C 88 N SER C 71 SHEET 5 C 7 VAL C 119 GLU C 125 1 O ILE C 121 N ARG C 85 SHEET 6 C 7 ARG C 155 LYS C 165 -1 O THR C 160 N ILE C 124 SHEET 7 C 7 ARG C 141 LYS C 152 -1 N GLY C 150 O LEU C 157 SHEET 1 D 7 GLU D 6 ASP D 9 0 SHEET 2 D 7 VAL D 57 LEU D 62 -1 O ILE D 61 N GLU D 6 SHEET 3 D 7 LYS D 65 ASP D 74 -1 O GLY D 68 N ALA D 60 SHEET 4 D 7 THR D 84 VAL D 91 -1 O SER D 88 N SER D 71 SHEET 5 D 7 VAL D 119 GLU D 125 1 O ILE D 121 N ARG D 85 SHEET 6 D 7 ARG D 155 LYS D 165 -1 O THR D 160 N ILE D 124 SHEET 7 D 7 ARG D 141 LYS D 152 -1 N PHE D 146 O LEU D 159 LINK C ILE A 18 N MSE A 19 1555 1555 1.33 LINK C MSE A 19 N GLU A 20 1555 1555 1.33 LINK C LEU A 104 N MSE A 105 1555 1555 1.33 LINK C MSE A 105 N GLN A 106 1555 1555 1.33 LINK C CYS A 161 N MSE A 162 1555 1555 1.32 LINK C MSE A 162 N GLU A 163 1555 1555 1.33 LINK C ILE B 18 N MSE B 19 1555 1555 1.33 LINK C MSE B 19 N GLU B 20 1555 1555 1.33 LINK C LEU B 104 N MSE B 105 1555 1555 1.33 LINK C MSE B 105 N GLN B 106 1555 1555 1.33 LINK C CYS B 161 N MSE B 162 1555 1555 1.33 LINK C MSE B 162 N GLU B 163 1555 1555 1.33 LINK C ILE C 18 N MSE C 19 1555 1555 1.33 LINK C MSE C 19 N GLU C 20 1555 1555 1.33 LINK C LEU C 104 N MSE C 105 1555 1555 1.33 LINK C MSE C 105 N GLN C 106 1555 1555 1.33 LINK C CYS C 161 N MSE C 162 1555 1555 1.33 LINK C MSE C 162 N GLU C 163 1555 1555 1.32 LINK C ILE D 18 N MSE D 19 1555 1555 1.33 LINK C MSE D 19 N GLU D 20 1555 1555 1.33 LINK C LEU D 104 N MSE D 105 1555 1555 1.33 LINK C MSE D 105 N GLN D 106 1555 1555 1.33 LINK C CYS D 161 N MSE D 162 1555 1555 1.33 LINK C MSE D 162 N GLU D 163 1555 1555 1.33 SITE 1 AC1 9 VAL A 91 ARG A 96 GLY A 97 ILE A 100 SITE 2 AC1 9 GLY A 101 HOH A1020 HOH A1064 HOH A1197 SITE 3 AC1 9 HOH A1207 SITE 1 AC2 10 TYR A 22 ARG A 43 TRP A 46 ARG A 50 SITE 2 AC2 10 TYR A 69 SER A 88 TYR A 90 HOH A1053 SITE 3 AC2 10 HOH A1087 HOH A1245 SITE 1 AC3 12 VAL B 91 ARG B 96 GLY B 97 GLY B 99 SITE 2 AC3 12 ILE B 100 GLY B 101 HOH B1010 HOH B1034 SITE 3 AC3 12 HOH B1058 HOH B1138 HOH B1169 HOH B1172 SITE 1 AC4 9 VAL C 91 ARG C 96 GLY C 97 ILE C 100 SITE 2 AC4 9 GLY C 101 HOH C1035 HOH C1094 HOH C1129 SITE 3 AC4 9 HOH C1135 SITE 1 AC5 9 VAL D 91 ARG D 96 GLY D 97 GLY D 99 SITE 2 AC5 9 ILE D 100 GLY D 101 HOH D1014 HOH D1020 SITE 3 AC5 9 HOH D1059 CRYST1 73.849 64.490 145.447 90.00 99.30 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013541 0.000000 0.002217 0.00000 SCALE2 0.000000 0.015506 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006967 0.00000 MASTER 362 0 17 24 28 0 15 6 0 0 0 56 END