HEADER OXIDOREDUCTASE 02-FEB-05 1YQX TITLE SINAPYL ALCOHOL DEHYDROGENASE AT 2.5 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: SINAPYL ALCOHOL DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.195; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: POPULUS TREMULOIDES; SOURCE 3 ORGANISM_COMMON: QUAKING ASPEN; SOURCE 4 ORGANISM_TAXID: 3693; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PHIS8 KEYWDS LIGNIN MONOLIGNOL OXIDOREDUCTASE ZINC-DEPENDENT, PLANT-DEFENSE, KEYWDS 2 BIOSYNTHESIS, MEDIUM-CHAIN DEHYDROGENASE/REDUCTASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR E.K.BOMATI,J.P.NOEL REVDAT 3 20-OCT-21 1YQX 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 1YQX 1 VERSN REVDAT 1 12-JUL-05 1YQX 0 JRNL AUTH E.K.BOMATI,J.P.NOEL JRNL TITL STRUCTURAL AND KINETIC BASIS FOR SUBSTRATE SELECTIVITY IN JRNL TITL 2 POPULUS TREMULOIDES SINAPYL ALCOHOL DEHYDROGENASE. JRNL REF PLANT CELL V. 17 1598 2005 JRNL REFN ISSN 1040-4651 JRNL PMID 15829607 JRNL DOI 10.1105/TPC.104.029983 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 109201.750 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 90.7 REMARK 3 NUMBER OF REFLECTIONS : 22921 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2268 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.66 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 77.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2936 REMARK 3 BIN R VALUE (WORKING SET) : 0.2970 REMARK 3 BIN FREE R VALUE : 0.3710 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 300 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.021 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5434 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 100 REMARK 3 SOLVENT ATOMS : 40 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.60000 REMARK 3 B22 (A**2) : -10.16000 REMARK 3 B33 (A**2) : 5.56000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM SIGMAA (A) : 0.37 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.42 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.46 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.700 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 3.870 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.130 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.850 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.760 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.520 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 28.14 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : N.PAR REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : WATER_REP.TOP REMARK 3 TOPOLOGY FILE 4 : N.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1YQX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-FEB-05. REMARK 100 THE DEPOSITION ID IS D_1000031827. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-APR-02 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0093 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22921 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 32.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS 1.1 REMARK 200 STARTING MODEL: UNREFINED STRUCTURE OF THE SAME PROTEIN SOLVED BY REMARK 200 MAD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: POLYETHYLENE GLYCOL MONOMETHYL ETHER REMARK 280 5000, POLYETHYLENE GLYCOL 400, MOPSO, BETA-MERCAPTOETHANOL, PH REMARK 280 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 38.18100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 69.08250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.18100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 69.08250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE DIMER IN THE ASYMMETRIC UNIT IS THE BIOLOGICAL ASSEMBLY REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -112.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 LYS A 3 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 HIS B -1 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 LYS B 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 21 10.86 -68.18 REMARK 500 PHE A 30 -157.61 -148.03 REMARK 500 CYS A 47 110.44 -162.01 REMARK 500 HIS A 72 35.82 -142.74 REMARK 500 SER A 105 -23.70 -167.33 REMARK 500 CYS A 166 -60.04 -126.46 REMARK 500 PRO A 183 150.96 -49.94 REMARK 500 ILE A 303 -131.98 30.43 REMARK 500 TYR A 347 -65.73 95.68 REMARK 500 ALA A 359 -9.12 -48.40 REMARK 500 GLN B 21 7.81 -68.41 REMARK 500 PHE B 30 -153.42 -144.50 REMARK 500 SER B 64 140.20 -27.32 REMARK 500 PRO B 70 -178.23 -68.15 REMARK 500 HIS B 72 32.56 -145.76 REMARK 500 ALA B 102 179.33 175.40 REMARK 500 SER B 105 52.77 -164.17 REMARK 500 LEU B 113 61.27 -118.62 REMARK 500 ASN B 155 33.78 -85.62 REMARK 500 CYS B 166 -63.08 -135.91 REMARK 500 ASP B 181 60.88 -100.23 REMARK 500 ARG B 236 44.77 -89.90 REMARK 500 ALA B 279 65.31 -111.66 REMARK 500 PRO B 280 164.93 -44.71 REMARK 500 ILE B 303 -140.37 38.17 REMARK 500 ASP B 331 2.85 -66.35 REMARK 500 TYR B 347 -53.00 94.96 REMARK 500 ALA B 358 -31.40 -37.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1000 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 50 SG REMARK 620 2 HIS A 72 NE2 102.7 REMARK 620 3 CYS A 166 SG 129.6 110.5 REMARK 620 4 HOH A2001 O 118.7 93.5 96.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A2000 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 103 SG REMARK 620 2 CYS A 106 SG 104.3 REMARK 620 3 CYS A 109 SG 125.2 101.7 REMARK 620 4 CYS A 117 SG 100.2 110.5 114.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B4000 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 50 SG REMARK 620 2 HIS B 72 NE2 104.4 REMARK 620 3 CYS B 166 SG 124.2 111.0 REMARK 620 4 HOH B4001 O 107.7 103.0 104.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B3000 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 103 SG REMARK 620 2 CYS B 106 SG 102.5 REMARK 620 3 CYS B 109 SG 116.9 110.1 REMARK 620 4 CYS B 117 SG 106.1 119.0 102.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 2000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 3000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 4000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP B 600 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1YQD RELATED DB: PDB REMARK 900 SINAPYL ALCOHOL DEHYDROGENASE COMPLEXED WITH NADP+ AT 1.65 ANGSTROM REMARK 900 RESOLUTION DBREF 1YQX A 1 362 UNP Q94G59 Q94G59_POPTM 1 362 DBREF 1YQX B 1 362 UNP Q94G59 Q94G59_POPTM 1 362 SEQADV 1YQX GLY A -3 UNP Q94G59 CLONING ARTIFACT SEQADV 1YQX SER A -2 UNP Q94G59 CLONING ARTIFACT SEQADV 1YQX HIS A -1 UNP Q94G59 CLONING ARTIFACT SEQADV 1YQX GLY A 0 UNP Q94G59 CLONING ARTIFACT SEQADV 1YQX ASN A 140 UNP Q94G59 ASP 140 ENGINEERED MUTATION SEQADV 1YQX GLY B -3 UNP Q94G59 CLONING ARTIFACT SEQADV 1YQX SER B -2 UNP Q94G59 CLONING ARTIFACT SEQADV 1YQX HIS B -1 UNP Q94G59 CLONING ARTIFACT SEQADV 1YQX GLY B 0 UNP Q94G59 CLONING ARTIFACT SEQADV 1YQX ASN B 140 UNP Q94G59 ASP 140 ENGINEERED MUTATION SEQRES 1 A 366 GLY SER HIS GLY MET SER LYS SER PRO GLU GLU GLU HIS SEQRES 2 A 366 PRO VAL LYS ALA PHE GLY TRP ALA ALA ARG ASP GLN SER SEQRES 3 A 366 GLY HIS LEU SER PRO PHE ASN PHE SER ARG ARG ALA THR SEQRES 4 A 366 GLY GLU GLU ASP VAL ARG PHE LYS VAL LEU TYR CYS GLY SEQRES 5 A 366 VAL CYS HIS SER ASP LEU HIS SER ILE LYS ASN ASP TRP SEQRES 6 A 366 GLY PHE SER MET TYR PRO LEU VAL PRO GLY HIS GLU ILE SEQRES 7 A 366 VAL GLY GLU VAL THR GLU VAL GLY SER LYS VAL LYS LYS SEQRES 8 A 366 VAL ASN VAL GLY ASP LYS VAL GLY VAL GLY CYS LEU VAL SEQRES 9 A 366 GLY ALA CYS HIS SER CYS GLU SER CYS ALA ASN ASP LEU SEQRES 10 A 366 GLU ASN TYR CYS PRO LYS MET ILE LEU THR TYR ALA SER SEQRES 11 A 366 ILE TYR HIS ASP GLY THR ILE THR TYR GLY GLY TYR SER SEQRES 12 A 366 ASN HIS MET VAL ALA ASN GLU ARG TYR ILE ILE ARG PHE SEQRES 13 A 366 PRO ASP ASN MET PRO LEU ASP GLY GLY ALA PRO LEU LEU SEQRES 14 A 366 CYS ALA GLY ILE THR VAL TYR SER PRO LEU LYS TYR PHE SEQRES 15 A 366 GLY LEU ASP GLU PRO GLY LYS HIS ILE GLY ILE VAL GLY SEQRES 16 A 366 LEU GLY GLY LEU GLY HIS VAL ALA VAL LYS PHE ALA LYS SEQRES 17 A 366 ALA PHE GLY SER LYS VAL THR VAL ILE SER THR SER PRO SEQRES 18 A 366 SER LYS LYS GLU GLU ALA LEU LYS ASN PHE GLY ALA ASP SEQRES 19 A 366 SER PHE LEU VAL SER ARG ASP GLN GLU GLN MET GLN ALA SEQRES 20 A 366 ALA ALA GLY THR LEU ASP GLY ILE ILE ASP THR VAL SER SEQRES 21 A 366 ALA VAL HIS PRO LEU LEU PRO LEU PHE GLY LEU LEU LYS SEQRES 22 A 366 SER HIS GLY LYS LEU ILE LEU VAL GLY ALA PRO GLU LYS SEQRES 23 A 366 PRO LEU GLU LEU PRO ALA PHE SER LEU ILE ALA GLY ARG SEQRES 24 A 366 LYS ILE VAL ALA GLY SER GLY ILE GLY GLY MET LYS GLU SEQRES 25 A 366 THR GLN GLU MET ILE ASP PHE ALA ALA LYS HIS ASN ILE SEQRES 26 A 366 THR ALA ASP ILE GLU VAL ILE SER THR ASP TYR LEU ASN SEQRES 27 A 366 THR ALA MET GLU ARG LEU ALA LYS ASN ASP VAL ARG TYR SEQRES 28 A 366 ARG PHE VAL ILE ASP VAL GLY ASN THR LEU ALA ALA THR SEQRES 29 A 366 LYS PRO SEQRES 1 B 366 GLY SER HIS GLY MET SER LYS SER PRO GLU GLU GLU HIS SEQRES 2 B 366 PRO VAL LYS ALA PHE GLY TRP ALA ALA ARG ASP GLN SER SEQRES 3 B 366 GLY HIS LEU SER PRO PHE ASN PHE SER ARG ARG ALA THR SEQRES 4 B 366 GLY GLU GLU ASP VAL ARG PHE LYS VAL LEU TYR CYS GLY SEQRES 5 B 366 VAL CYS HIS SER ASP LEU HIS SER ILE LYS ASN ASP TRP SEQRES 6 B 366 GLY PHE SER MET TYR PRO LEU VAL PRO GLY HIS GLU ILE SEQRES 7 B 366 VAL GLY GLU VAL THR GLU VAL GLY SER LYS VAL LYS LYS SEQRES 8 B 366 VAL ASN VAL GLY ASP LYS VAL GLY VAL GLY CYS LEU VAL SEQRES 9 B 366 GLY ALA CYS HIS SER CYS GLU SER CYS ALA ASN ASP LEU SEQRES 10 B 366 GLU ASN TYR CYS PRO LYS MET ILE LEU THR TYR ALA SER SEQRES 11 B 366 ILE TYR HIS ASP GLY THR ILE THR TYR GLY GLY TYR SER SEQRES 12 B 366 ASN HIS MET VAL ALA ASN GLU ARG TYR ILE ILE ARG PHE SEQRES 13 B 366 PRO ASP ASN MET PRO LEU ASP GLY GLY ALA PRO LEU LEU SEQRES 14 B 366 CYS ALA GLY ILE THR VAL TYR SER PRO LEU LYS TYR PHE SEQRES 15 B 366 GLY LEU ASP GLU PRO GLY LYS HIS ILE GLY ILE VAL GLY SEQRES 16 B 366 LEU GLY GLY LEU GLY HIS VAL ALA VAL LYS PHE ALA LYS SEQRES 17 B 366 ALA PHE GLY SER LYS VAL THR VAL ILE SER THR SER PRO SEQRES 18 B 366 SER LYS LYS GLU GLU ALA LEU LYS ASN PHE GLY ALA ASP SEQRES 19 B 366 SER PHE LEU VAL SER ARG ASP GLN GLU GLN MET GLN ALA SEQRES 20 B 366 ALA ALA GLY THR LEU ASP GLY ILE ILE ASP THR VAL SER SEQRES 21 B 366 ALA VAL HIS PRO LEU LEU PRO LEU PHE GLY LEU LEU LYS SEQRES 22 B 366 SER HIS GLY LYS LEU ILE LEU VAL GLY ALA PRO GLU LYS SEQRES 23 B 366 PRO LEU GLU LEU PRO ALA PHE SER LEU ILE ALA GLY ARG SEQRES 24 B 366 LYS ILE VAL ALA GLY SER GLY ILE GLY GLY MET LYS GLU SEQRES 25 B 366 THR GLN GLU MET ILE ASP PHE ALA ALA LYS HIS ASN ILE SEQRES 26 B 366 THR ALA ASP ILE GLU VAL ILE SER THR ASP TYR LEU ASN SEQRES 27 B 366 THR ALA MET GLU ARG LEU ALA LYS ASN ASP VAL ARG TYR SEQRES 28 B 366 ARG PHE VAL ILE ASP VAL GLY ASN THR LEU ALA ALA THR SEQRES 29 B 366 LYS PRO HET ZN A1000 1 HET ZN A2000 1 HET NAP A 500 48 HET ZN B3000 1 HET ZN B4000 1 HET NAP B 600 48 HETNAM ZN ZINC ION HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 3 ZN 4(ZN 2+) FORMUL 5 NAP 2(C21 H28 N7 O17 P3) FORMUL 9 HOH *40(H2 O) HELIX 1 1 CYS A 50 LYS A 58 1 9 HELIX 2 2 CYS A 106 ASN A 111 1 6 HELIX 3 3 LEU A 113 CYS A 117 5 5 HELIX 4 4 ARG A 147 ILE A 149 5 3 HELIX 5 5 GLY A 161 LEU A 165 5 5 HELIX 6 6 CYS A 166 PHE A 178 1 13 HELIX 7 7 GLY A 193 GLY A 207 1 15 HELIX 8 8 SER A 216 SER A 218 5 3 HELIX 9 9 LYS A 219 ASN A 226 1 8 HELIX 10 10 ASP A 237 ALA A 244 1 8 HELIX 11 11 LEU A 261 GLY A 266 1 6 HELIX 12 12 PRO A 287 ALA A 293 1 7 HELIX 13 13 GLY A 305 HIS A 319 1 15 HELIX 14 14 SER A 329 ASP A 331 5 3 HELIX 15 15 TYR A 332 LYS A 342 1 11 HELIX 16 16 VAL A 353 LEU A 357 1 5 HELIX 17 17 ALA A 358 LYS A 361 5 4 HELIX 18 18 CYS B 50 LYS B 58 1 9 HELIX 19 19 CYS B 106 ASN B 111 1 6 HELIX 20 20 LEU B 113 CYS B 117 5 5 HELIX 21 21 ARG B 147 ILE B 149 5 3 HELIX 22 22 PRO B 157 ALA B 162 1 6 HELIX 23 23 PRO B 163 LEU B 165 5 3 HELIX 24 24 CYS B 166 PHE B 178 1 13 HELIX 25 25 GLY B 193 PHE B 206 1 14 HELIX 26 26 SER B 216 SER B 218 5 3 HELIX 27 27 LYS B 219 ASN B 226 1 8 HELIX 28 28 ASP B 237 ALA B 244 1 8 HELIX 29 29 LEU B 261 LEU B 267 1 7 HELIX 30 30 PRO B 287 ALA B 293 1 7 HELIX 31 31 GLY B 305 HIS B 319 1 15 HELIX 32 32 SER B 329 ASP B 331 5 3 HELIX 33 33 TYR B 332 LYS B 342 1 11 HELIX 34 34 ASP B 352 LEU B 357 1 6 HELIX 35 35 ALA B 358 LYS B 361 5 4 SHEET 1 A 2 VAL A 11 ALA A 18 0 SHEET 2 A 2 LEU A 25 ARG A 32 -1 O PHE A 28 N GLY A 15 SHEET 1 B 5 HIS A 141 ASN A 145 0 SHEET 2 B 5 ASP A 39 GLY A 48 -1 N PHE A 42 O MET A 142 SHEET 3 B 5 ILE A 74 VAL A 81 -1 O GLU A 80 N ARG A 41 SHEET 4 B 5 LYS A 93 VAL A 96 -1 O VAL A 94 N GLY A 76 SHEET 5 B 5 ILE A 150 ARG A 151 -1 O ILE A 150 N GLY A 95 SHEET 1 C 4 HIS A 141 ASN A 145 0 SHEET 2 C 4 ASP A 39 GLY A 48 -1 N PHE A 42 O MET A 142 SHEET 3 C 4 ARG A 348 ASP A 352 -1 O ILE A 351 N CYS A 47 SHEET 4 C 4 ILE A 325 ILE A 328 1 N GLU A 326 O ARG A 348 SHEET 1 D 2 LEU A 99 GLY A 101 0 SHEET 2 D 2 ILE A 121 LEU A 122 -1 O ILE A 121 N GLY A 101 SHEET 1 E12 SER A 231 VAL A 234 0 SHEET 2 E12 LYS A 209 SER A 214 1 N SER A 214 O LEU A 233 SHEET 3 E12 HIS A 186 VAL A 190 1 N ILE A 187 O THR A 211 SHEET 4 E12 LEU A 248 ASP A 253 1 O ILE A 252 N GLY A 188 SHEET 5 E12 LEU A 268 LEU A 276 1 O ILE A 275 N ILE A 251 SHEET 6 E12 ILE A 297 GLY A 300 1 O ALA A 299 N LEU A 276 SHEET 7 E12 ILE B 297 GLY B 300 -1 O VAL B 298 N VAL A 298 SHEET 8 E12 LEU B 268 LEU B 276 1 N LEU B 276 O ALA B 299 SHEET 9 E12 LEU B 248 ASP B 253 1 N ASP B 253 O ILE B 275 SHEET 10 E12 HIS B 186 VAL B 190 1 N GLY B 188 O ILE B 252 SHEET 11 E12 LYS B 209 SER B 214 1 O LYS B 209 N ILE B 187 SHEET 12 E12 SER B 231 VAL B 234 1 O SER B 231 N VAL B 212 SHEET 1 F 2 LEU A 284 LEU A 286 0 SHEET 2 F 2 LEU B 284 LEU B 286 -1 O LEU B 286 N LEU A 284 SHEET 1 G 2 VAL B 11 ALA B 18 0 SHEET 2 G 2 LEU B 25 ARG B 32 -1 O PHE B 28 N GLY B 15 SHEET 1 H 5 HIS B 141 ASN B 145 0 SHEET 2 H 5 ASP B 39 GLY B 48 -1 N PHE B 42 O MET B 142 SHEET 3 H 5 ILE B 74 VAL B 81 -1 O GLU B 80 N ARG B 41 SHEET 4 H 5 LYS B 93 VAL B 96 -1 O VAL B 96 N ILE B 74 SHEET 5 H 5 ILE B 150 ARG B 151 -1 O ILE B 150 N GLY B 95 SHEET 1 I 4 HIS B 141 ASN B 145 0 SHEET 2 I 4 ASP B 39 GLY B 48 -1 N PHE B 42 O MET B 142 SHEET 3 I 4 ARG B 348 ILE B 351 -1 O ILE B 351 N CYS B 47 SHEET 4 I 4 ILE B 325 ILE B 328 1 N ILE B 328 O VAL B 350 SHEET 1 J 2 LEU B 99 GLY B 101 0 SHEET 2 J 2 ILE B 121 LEU B 122 -1 O ILE B 121 N GLY B 101 LINK SG CYS A 50 ZN ZN A1000 1555 1555 2.39 LINK NE2 HIS A 72 ZN ZN A1000 1555 1555 2.42 LINK SG CYS A 103 ZN ZN A2000 1555 1555 2.36 LINK SG CYS A 106 ZN ZN A2000 1555 1555 2.71 LINK SG CYS A 109 ZN ZN A2000 1555 1555 2.45 LINK SG CYS A 117 ZN ZN A2000 1555 1555 2.53 LINK SG CYS A 166 ZN ZN A1000 1555 1555 2.39 LINK ZN ZN A1000 O HOH A2001 1555 1555 2.65 LINK SG CYS B 50 ZN ZN B4000 1555 1555 2.55 LINK NE2 HIS B 72 ZN ZN B4000 1555 1555 2.19 LINK SG CYS B 103 ZN ZN B3000 1555 1555 2.33 LINK SG CYS B 106 ZN ZN B3000 1555 1555 2.48 LINK SG CYS B 109 ZN ZN B3000 1555 1555 2.35 LINK SG CYS B 117 ZN ZN B3000 1555 1555 2.55 LINK SG CYS B 166 ZN ZN B4000 1555 1555 2.28 LINK ZN ZN B4000 O HOH B4001 1555 1555 2.41 CISPEP 1 TYR A 66 PRO A 67 0 -1.35 CISPEP 2 TYR B 66 PRO B 67 0 -1.02 SITE 1 AC1 5 CYS A 50 HIS A 72 CYS A 166 NAP A 500 SITE 2 AC1 5 HOH A2001 SITE 1 AC2 5 CYS A 103 HIS A 104 CYS A 106 CYS A 109 SITE 2 AC2 5 CYS A 117 SITE 1 AC3 4 CYS B 103 CYS B 106 CYS B 109 CYS B 117 SITE 1 AC4 5 CYS B 50 HIS B 72 CYS B 166 NAP B 600 SITE 2 AC4 5 HOH B4001 SITE 1 AC5 30 HIS A 51 SER A 52 HIS A 55 TRP A 61 SITE 2 AC5 30 CYS A 166 THR A 170 GLY A 191 LEU A 192 SITE 3 AC5 30 GLY A 193 GLY A 194 LEU A 195 SER A 214 SITE 4 AC5 30 THR A 215 SER A 216 LYS A 219 THR A 254 SITE 5 AC5 30 VAL A 255 SER A 256 ALA A 257 VAL A 277 SITE 6 AC5 30 GLY A 278 ALA A 279 SER A 301 GLY A 302 SITE 7 AC5 30 ILE A 303 ASN A 343 ARG A 348 ZN A1000 SITE 8 AC5 30 HOH A2003 ILE B 292 SITE 1 AC6 29 ILE A 292 CYS B 50 HIS B 51 SER B 52 SITE 2 AC6 29 HIS B 55 CYS B 166 THR B 170 GLY B 191 SITE 3 AC6 29 LEU B 192 GLY B 193 GLY B 194 LEU B 195 SITE 4 AC6 29 SER B 214 THR B 215 SER B 216 LYS B 219 SITE 5 AC6 29 THR B 254 VAL B 255 SER B 256 VAL B 277 SITE 6 AC6 29 GLY B 278 ALA B 279 SER B 301 GLY B 302 SITE 7 AC6 29 ILE B 303 ASN B 343 ARG B 348 ZN B4000 SITE 8 AC6 29 HOH B4014 CRYST1 76.362 138.165 67.629 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013096 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007238 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014787 0.00000 MASTER 360 0 6 35 40 0 23 6 0 0 0 58 END