HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 21-DEC-04 1YBX TITLE CONSERVED HYPOTHETICAL PROTEIN CTH-383 FROM CLOSTRIDIUM THERMOCELLUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONSERVED HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM THERMOCELLUM; SOURCE 3 ORGANISM_TAXID: 1515; SOURCE 4 ATCC: 27405; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CONSERVED HYPOTHETICAL PROTEIN, CLOSTRIDIUM THERMOCELLUM, STRUCTURAL KEYWDS 2 GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, SOUTHEAST COLLABORATORY KEYWDS 3 FOR STRUCTURAL GENOMICS, SECSG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR W.TEMPEL,J.CHANG,M.ZHAO,J.HABEL,I.KATAEVA,H.XU,L.CHEN,D.LEE,J.NGUYEN, AUTHOR 2 S.-H.CHANG,P.HORANYI,Q.FLORENCE,W.ZHOU,D.LIN,H.ZHANG,L.LJUNDAHL,Z.- AUTHOR 3 J.LIU,J.ROSE,B.-C.WANG,SOUTHEAST COLLABORATORY FOR STRUCTURAL AUTHOR 4 GENOMICS (SECSG) REVDAT 5 11-OCT-17 1YBX 1 REMARK REVDAT 4 13-JUL-11 1YBX 1 VERSN REVDAT 3 24-FEB-09 1YBX 1 VERSN REVDAT 2 24-OCT-06 1YBX 1 KEYWDS JRNL REMARK MASTER REVDAT 1 01-FEB-05 1YBX 0 JRNL AUTH W.TEMPEL,J.CHANG,M.ZHAO,J.HABEL,I.KATAEVA,H.XU,L.CHEN,D.LEE, JRNL AUTH 2 J.NGUYEN,S.-H.CHANG,P.HORANYI,Q.FLORENCE,W.ZHOU,D.LIN, JRNL AUTH 3 H.ZHANG,L.LJUNDAHL,Z.-J.LIU,J.ROSE,B.-C.WANG JRNL TITL CONSERVED HYPOTHETICAL PROTEIN CTH-383 FROM CLOSTRIDIUM JRNL TITL 2 THERMOCELLUM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 16267 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : THIN SHELLS REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.164 REMARK 3 FREE R VALUE TEST SET COUNT : 840 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 387 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3410 REMARK 3 BIN FREE R VALUE SET COUNT : 0 REMARK 3 BIN FREE R VALUE : 0.3370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1337 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 90 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.35400 REMARK 3 B22 (A**2) : 1.12500 REMARK 3 B33 (A**2) : -1.07900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.41300 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.159 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.143 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.116 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.572 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1348 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1320 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1821 ; 1.455 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3058 ; 0.842 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 183 ; 4.746 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 49 ;37.552 ;27.551 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 263 ;14.506 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;20.756 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 234 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1487 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 203 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 260 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1184 ; 0.165 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 663 ; 0.152 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 828 ; 0.082 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 51 ; 0.142 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 5 ; 0.139 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 22 ; 0.272 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.141 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 964 ; 1.299 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 376 ; 0.295 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1476 ; 1.459 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1255 ; 0.638 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 438 ; 3.164 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 956 ; 0.645 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 345 ; 5.031 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1803 ; 1.878 ; 4.500 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 103 REMARK 3 ORIGIN FOR THE GROUP (A): -12.6570 13.5280 55.7010 REMARK 3 T TENSOR REMARK 3 T11: -0.0394 T22: 0.0208 REMARK 3 T33: -0.1602 T12: 0.0157 REMARK 3 T13: -0.0085 T23: 0.0213 REMARK 3 L TENSOR REMARK 3 L11: 2.0108 L22: 1.3136 REMARK 3 L33: 7.1043 L12: -0.7285 REMARK 3 L13: -2.3484 L23: 2.9066 REMARK 3 S TENSOR REMARK 3 S11: 0.0225 S12: -0.2622 S13: 0.0942 REMARK 3 S21: -0.0194 S22: 0.0483 S23: 0.0247 REMARK 3 S31: -0.1862 S32: 0.3435 S33: -0.0708 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 12 B 103 REMARK 3 ORIGIN FOR THE GROUP (A): -8.4690 -2.6340 56.1550 REMARK 3 T TENSOR REMARK 3 T11: -0.0443 T22: -0.0001 REMARK 3 T33: -0.1435 T12: 0.0095 REMARK 3 T13: -0.0372 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 2.0375 L22: 1.0346 REMARK 3 L33: 5.0612 L12: -0.4085 REMARK 3 L13: 1.6952 L23: -1.8220 REMARK 3 S TENSOR REMARK 3 S11: 0.0625 S12: -0.2283 S13: -0.2389 REMARK 3 S21: 0.0928 S22: 0.0230 S23: -0.0888 REMARK 3 S31: 0.1663 S32: 0.0183 S33: -0.0855 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1YBX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-DEC-04. REMARK 100 THE DEPOSITION ID IS D_1000031358. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16740 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.710 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 73.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.71 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.77 REMARK 200 COMPLETENESS FOR SHELL (%) : 12.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.39600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAS REMARK 200 SOFTWARE USED: SOLVE 2.06, RESOLVE 2.06, ISAS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 27.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% W/V PEG 3350, 0.2M TRILITHIUM REMARK 280 CITRATE, MODIFIED MICROBATCH, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 18.39600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAINS. THE BIOLOGICAL UNIT IS REMARK 300 UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -29 REMARK 465 GLY A -28 REMARK 465 SER A -27 REMARK 465 SER A -26 REMARK 465 HIS A -25 REMARK 465 HIS A -24 REMARK 465 HIS A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 SER A -19 REMARK 465 SER A -18 REMARK 465 GLY A -17 REMARK 465 LEU A -16 REMARK 465 VAL A -15 REMARK 465 PRO A -14 REMARK 465 ARG A -13 REMARK 465 GLY A -12 REMARK 465 SER A -11 REMARK 465 GLN A -10 REMARK 465 SER A -9 REMARK 465 THR A -8 REMARK 465 SER A -7 REMARK 465 LEU A -6 REMARK 465 TYR A -5 REMARK 465 LYS A -4 REMARK 465 LYS A -3 REMARK 465 ALA A -2 REMARK 465 GLY A -1 REMARK 465 LEU A 0 REMARK 465 MSE A 1 REMARK 465 ALA A 2 REMARK 465 LYS A 3 REMARK 465 GLY A 4 REMARK 465 GLY A 5 REMARK 465 PHE A 6 REMARK 465 PRO A 7 REMARK 465 GLY A 8 REMARK 465 PHE A 9 REMARK 465 GLY A 10 REMARK 465 GLY A 11 REMARK 465 ASN A 12 REMARK 465 GLY A 104 REMARK 465 GLY A 105 REMARK 465 LEU A 106 REMARK 465 GLY A 107 REMARK 465 GLY A 108 REMARK 465 ILE A 109 REMARK 465 PRO A 110 REMARK 465 GLY A 111 REMARK 465 LEU A 112 REMARK 465 PHE A 113 REMARK 465 MSE B -29 REMARK 465 GLY B -28 REMARK 465 SER B -27 REMARK 465 SER B -26 REMARK 465 HIS B -25 REMARK 465 HIS B -24 REMARK 465 HIS B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 SER B -19 REMARK 465 SER B -18 REMARK 465 GLY B -17 REMARK 465 LEU B -16 REMARK 465 VAL B -15 REMARK 465 PRO B -14 REMARK 465 ARG B -13 REMARK 465 GLY B -12 REMARK 465 SER B -11 REMARK 465 GLN B -10 REMARK 465 SER B -9 REMARK 465 THR B -8 REMARK 465 SER B -7 REMARK 465 LEU B -6 REMARK 465 TYR B -5 REMARK 465 LYS B -4 REMARK 465 LYS B -3 REMARK 465 ALA B -2 REMARK 465 GLY B -1 REMARK 465 LEU B 0 REMARK 465 MSE B 1 REMARK 465 ALA B 2 REMARK 465 LYS B 3 REMARK 465 GLY B 4 REMARK 465 GLY B 5 REMARK 465 PHE B 6 REMARK 465 PRO B 7 REMARK 465 GLY B 8 REMARK 465 PHE B 9 REMARK 465 GLY B 10 REMARK 465 GLY B 11 REMARK 465 GLY B 104 REMARK 465 GLY B 105 REMARK 465 LEU B 106 REMARK 465 GLY B 107 REMARK 465 GLY B 108 REMARK 465 ILE B 109 REMARK 465 PRO B 110 REMARK 465 GLY B 111 REMARK 465 LEU B 112 REMARK 465 PHE B 113 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 13 CG1 CD1 REMARK 470 ASN A 14 CG OD1 ND2 REMARK 470 LYS A 18 CE NZ REMARK 470 GLN A 31 CD OE1 NE2 REMARK 470 LYS A 35 CE NZ REMARK 470 GLU A 36 CG CD OE1 OE2 REMARK 470 ARG A 55 CD NE CZ NH1 NH2 REMARK 470 LYS A 59 CE NZ REMARK 470 ILE B 13 CG1 CG2 CD1 REMARK 470 ASN B 14 CG OD1 ND2 REMARK 470 LYS B 18 CD CE NZ REMARK 470 GLN B 19 CG CD OE1 NE2 REMARK 470 LYS B 22 CE NZ REMARK 470 GLN B 31 CD OE1 NE2 REMARK 470 GLU B 32 CG CD OE1 OE2 REMARK 470 LYS B 35 CE NZ REMARK 470 GLU B 36 CG CD OE1 OE2 REMARK 470 ARG B 55 CD NE CZ NH1 NH2 REMARK 470 LYS B 59 NZ REMARK 470 GLU B 60 CD OE1 OE2 REMARK 470 GLU B 93 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 72 64.03 -150.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX B 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CTH-383 RELATED DB: TARGETDB DBREF 1YBX A 1 113 GB 48857448 ZP_00311451 1 113 DBREF 1YBX B 1 113 GB 48857448 ZP_00311451 1 113 SEQADV 1YBX MSE A -29 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLY A -28 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER A -27 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER A -26 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS A -25 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS A -24 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS A -23 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS A -22 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS A -21 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS A -20 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER A -19 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER A -18 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLY A -17 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LEU A -16 GB 48857448 CLONING ARTIFACT SEQADV 1YBX VAL A -15 GB 48857448 CLONING ARTIFACT SEQADV 1YBX PRO A -14 GB 48857448 CLONING ARTIFACT SEQADV 1YBX ARG A -13 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLY A -12 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER A -11 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLN A -10 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER A -9 GB 48857448 CLONING ARTIFACT SEQADV 1YBX THR A -8 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER A -7 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LEU A -6 GB 48857448 CLONING ARTIFACT SEQADV 1YBX TYR A -5 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LYS A -4 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LYS A -3 GB 48857448 CLONING ARTIFACT SEQADV 1YBX ALA A -2 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLY A -1 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LEU A 0 GB 48857448 CLONING ARTIFACT SEQADV 1YBX MSE A 1 GB 48857448 MET 1 MODIFIED RESIDUE SEQADV 1YBX MSE A 23 GB 48857448 MET 23 MODIFIED RESIDUE SEQADV 1YBX MSE A 27 GB 48857448 MET 27 MODIFIED RESIDUE SEQADV 1YBX MSE A 75 GB 48857448 MET 75 MODIFIED RESIDUE SEQADV 1YBX MSE A 94 GB 48857448 MET 94 MODIFIED RESIDUE SEQADV 1YBX MSE B -29 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLY B -28 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER B -27 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER B -26 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS B -25 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS B -24 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS B -23 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS B -22 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS B -21 GB 48857448 CLONING ARTIFACT SEQADV 1YBX HIS B -20 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER B -19 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER B -18 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLY B -17 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LEU B -16 GB 48857448 CLONING ARTIFACT SEQADV 1YBX VAL B -15 GB 48857448 CLONING ARTIFACT SEQADV 1YBX PRO B -14 GB 48857448 CLONING ARTIFACT SEQADV 1YBX ARG B -13 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLY B -12 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER B -11 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLN B -10 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER B -9 GB 48857448 CLONING ARTIFACT SEQADV 1YBX THR B -8 GB 48857448 CLONING ARTIFACT SEQADV 1YBX SER B -7 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LEU B -6 GB 48857448 CLONING ARTIFACT SEQADV 1YBX TYR B -5 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LYS B -4 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LYS B -3 GB 48857448 CLONING ARTIFACT SEQADV 1YBX ALA B -2 GB 48857448 CLONING ARTIFACT SEQADV 1YBX GLY B -1 GB 48857448 CLONING ARTIFACT SEQADV 1YBX LEU B 0 GB 48857448 CLONING ARTIFACT SEQADV 1YBX MSE B 1 GB 48857448 MET 1 MODIFIED RESIDUE SEQADV 1YBX MSE B 23 GB 48857448 MET 23 MODIFIED RESIDUE SEQADV 1YBX MSE B 27 GB 48857448 MET 27 MODIFIED RESIDUE SEQADV 1YBX MSE B 75 GB 48857448 MET 75 MODIFIED RESIDUE SEQADV 1YBX MSE B 94 GB 48857448 MET 94 MODIFIED RESIDUE SEQRES 1 A 143 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 143 LEU VAL PRO ARG GLY SER GLN SER THR SER LEU TYR LYS SEQRES 3 A 143 LYS ALA GLY LEU MSE ALA LYS GLY GLY PHE PRO GLY PHE SEQRES 4 A 143 GLY GLY ASN ILE ASN ASN LEU VAL LYS GLN ALA GLN LYS SEQRES 5 A 143 MSE GLN ARG ASP MSE GLU ARG VAL GLN GLU GLU LEU LYS SEQRES 6 A 143 GLU LYS THR VAL GLU ALA SER ALA GLY GLY GLY ALA VAL SEQRES 7 A 143 THR VAL VAL ALA THR GLY ARG LYS ASP ILE LYS GLU ILE SEQRES 8 A 143 THR ILE LYS PRO GLU VAL VAL ASP PRO ASP ASP VAL GLU SEQRES 9 A 143 MSE LEU GLN ASP LEU ILE LEU ALA ALA VAL ASN GLU ALA SEQRES 10 A 143 LEU ARG LYS ALA ASP GLU MSE VAL THR ALA GLU ILE SER SEQRES 11 A 143 LYS ILE THR GLY GLY LEU GLY GLY ILE PRO GLY LEU PHE SEQRES 1 B 143 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 143 LEU VAL PRO ARG GLY SER GLN SER THR SER LEU TYR LYS SEQRES 3 B 143 LYS ALA GLY LEU MSE ALA LYS GLY GLY PHE PRO GLY PHE SEQRES 4 B 143 GLY GLY ASN ILE ASN ASN LEU VAL LYS GLN ALA GLN LYS SEQRES 5 B 143 MSE GLN ARG ASP MSE GLU ARG VAL GLN GLU GLU LEU LYS SEQRES 6 B 143 GLU LYS THR VAL GLU ALA SER ALA GLY GLY GLY ALA VAL SEQRES 7 B 143 THR VAL VAL ALA THR GLY ARG LYS ASP ILE LYS GLU ILE SEQRES 8 B 143 THR ILE LYS PRO GLU VAL VAL ASP PRO ASP ASP VAL GLU SEQRES 9 B 143 MSE LEU GLN ASP LEU ILE LEU ALA ALA VAL ASN GLU ALA SEQRES 10 B 143 LEU ARG LYS ALA ASP GLU MSE VAL THR ALA GLU ILE SER SEQRES 11 B 143 LYS ILE THR GLY GLY LEU GLY GLY ILE PRO GLY LEU PHE MODRES 1YBX MSE A 23 MET SELENOMETHIONINE MODRES 1YBX MSE A 27 MET SELENOMETHIONINE MODRES 1YBX MSE A 75 MET SELENOMETHIONINE MODRES 1YBX MSE A 94 MET SELENOMETHIONINE MODRES 1YBX MSE B 23 MET SELENOMETHIONINE MODRES 1YBX MSE B 27 MET SELENOMETHIONINE MODRES 1YBX MSE B 75 MET SELENOMETHIONINE MODRES 1YBX MSE B 94 MET SELENOMETHIONINE HET MSE A 23 8 HET MSE A 27 8 HET MSE A 75 8 HET MSE A 94 8 HET MSE B 23 8 HET MSE B 27 16 HET MSE B 75 8 HET MSE B 94 8 HET UNX A 201 1 HET UNX A 202 1 HET UNX A 203 1 HET UNX B 204 1 HETNAM MSE SELENOMETHIONINE HETNAM UNX UNKNOWN ATOM OR ION FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 UNX 4(X) FORMUL 7 HOH *90(H2 O) HELIX 1 1 ILE A 13 LYS A 37 1 25 HELIX 2 2 PRO A 65 VAL A 68 5 4 HELIX 3 3 ASP A 72 THR A 103 1 32 HELIX 4 4 ASN B 12 LYS B 37 1 26 HELIX 5 5 PRO B 65 VAL B 68 5 4 HELIX 6 6 ASP B 72 ILE B 102 1 31 SHEET 1 A 3 THR A 38 ALA A 43 0 SHEET 2 A 3 VAL A 48 THR A 53 -1 O VAL A 50 N ALA A 41 SHEET 3 A 3 ILE A 58 ILE A 63 -1 O LYS A 59 N VAL A 51 SHEET 1 B 3 THR B 38 ALA B 43 0 SHEET 2 B 3 VAL B 48 THR B 53 -1 O VAL B 50 N ALA B 41 SHEET 3 B 3 ILE B 58 ILE B 63 -1 O LYS B 59 N VAL B 51 LINK C LYS A 22 N MSE A 23 1555 1555 1.33 LINK C MSE A 23 N GLN A 24 1555 1555 1.32 LINK C ASP A 26 N MSE A 27 1555 1555 1.32 LINK C MSE A 27 N GLU A 28 1555 1555 1.34 LINK C GLU A 74 N MSE A 75 1555 1555 1.33 LINK C MSE A 75 N LEU A 76 1555 1555 1.34 LINK C GLU A 93 N MSE A 94 1555 1555 1.34 LINK C MSE A 94 N VAL A 95 1555 1555 1.33 LINK C LYS B 22 N MSE B 23 1555 1555 1.33 LINK C MSE B 23 N GLN B 24 1555 1555 1.33 LINK C ASP B 26 N BMSE B 27 1555 1555 1.34 LINK C ASP B 26 N AMSE B 27 1555 1555 1.33 LINK C BMSE B 27 N GLU B 28 1555 1555 1.33 LINK C AMSE B 27 N GLU B 28 1555 1555 1.33 LINK C GLU B 74 N MSE B 75 1555 1555 1.33 LINK C MSE B 75 N LEU B 76 1555 1555 1.32 LINK C GLU B 93 N MSE B 94 1555 1555 1.33 LINK C MSE B 94 N VAL B 95 1555 1555 1.33 SITE 1 AC1 3 LYS A 64 PRO A 65 GLU A 66 SITE 1 AC2 3 ALA A 82 GLU A 86 ARG A 89 SITE 1 AC3 1 GLY B 44 CRYST1 49.914 36.792 61.824 90.00 111.93 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020000 0.000000 0.008100 0.00000 SCALE2 0.000000 0.027200 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017400 0.00000 MASTER 437 0 12 6 6 0 3 6 0 0 0 22 END