HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 10-DEC-04 1Y80 TITLE STRUCTURE OF A CORRINOID (FACTOR IIIM)-BINDING PROTEIN FROM MOORELLA TITLE 2 THERMOACETICA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PREDICTED COBALAMIN BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CORRINOID (FACTOR IIIM)-BINDING PROTEIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MOORELLA THERMOACETICA; SOURCE 3 ORGANISM_TAXID: 1525 KEYWDS CORRINOID, FACTOR IIIM, METHYL TRANSFERASE, STRUCTURAL GENOMICS, PSI, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, SOUTHEAST COLLABORATORY FOR STRUCTURAL KEYWDS 3 GENOMICS, SECSG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR Z.-J.LIU,Z.-Q.FU,W.TEMPEL,A.DAS,J.HABEL,W.ZHOU,J.CHANG,L.CHEN,D.LEE, AUTHOR 2 D.NGUYEN,S.-H.CHANG,L.LJUNGDAHL,J.P.ROSE,B.-C.WANG,SOUTHEAST AUTHOR 3 COLLABORATORY FOR STRUCTURAL GENOMICS (SECSG) REVDAT 5 11-OCT-17 1Y80 1 REMARK REVDAT 4 25-JUL-12 1Y80 1 REMARK VERSN REVDAT 3 24-FEB-09 1Y80 1 VERSN REVDAT 2 24-OCT-06 1Y80 1 KEYWDS JRNL REMARK MASTER REVDAT 1 25-JAN-05 1Y80 0 JRNL AUTH Z.-J.LIU,Z.-Q.FU,W.TEMPEL,A.DAS,J.HABEL,W.ZHOU,J.CHANG, JRNL AUTH 2 L.CHEN,D.LEE,D.NGUYEN,S.-H.CHANG,L.LJUNGDAHL,J.P.ROSE, JRNL AUTH 3 B.-C.WANG JRNL TITL STRUCTURE OF A CORRINOID (FACTOR IIIM)-BINDING PROTEIN FROM JRNL TITL 2 MOORELLA THERMOACETICA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.63 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.5 REMARK 3 NUMBER OF REFLECTIONS : 12184 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.200 REMARK 3 FREE R VALUE TEST SET COUNT : 528 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 719 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 73.61 REMARK 3 BIN R VALUE (WORKING SET) : 0.2140 REMARK 3 BIN FREE R VALUE SET COUNT : 34 REMARK 3 BIN FREE R VALUE : 0.2220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 909 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 96 REMARK 3 SOLVENT ATOMS : 72 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.32000 REMARK 3 B22 (A**2) : -1.09000 REMARK 3 B33 (A**2) : 0.77000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.115 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.112 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.066 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.945 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1031 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 987 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1422 ; 1.954 ; 2.120 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2290 ; 0.753 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 124 ; 4.929 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 30 ;29.320 ;26.333 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 170 ;10.938 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 2 ; 3.964 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 168 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1127 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 189 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 188 ; 0.205 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1067 ; 0.171 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 497 ; 0.162 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 561 ; 0.081 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 50 ; 0.096 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 4 ; 0.102 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 31 ; 0.231 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.075 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 674 ; 1.861 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 261 ; 0.466 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 989 ; 2.299 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 456 ; 2.077 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 433 ; 3.029 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1Y80 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JAN-05. REMARK 100 THE DEPOSITION ID IS D_1000031231. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5798 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13939 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 38.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.21600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE 2.02, RESOLVE 2.02, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM HEPES, 1.6M AMMONIUM REMARK 280 SULFATE, 30% 1,6-HEXANEDIOL, PH 6.7, MODIFIED MICROBATCH, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 27.84450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.36900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.84450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.36900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 1 CHAIN. THE BIOLOGICAL UNIT IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 THR A 3 REMARK 465 TYR A 4 REMARK 465 GLU A 5 REMARK 465 GLU A 6 REMARK 465 LEU A 7 REMARK 465 SER A 8 REMARK 465 GLN A 9 REMARK 465 ALA A 10 REMARK 465 VAL A 11 REMARK 465 PHE A 12 REMARK 465 GLU A 13 REMARK 465 GLY A 14 REMARK 465 ASP A 15 REMARK 465 GLU A 16 REMARK 465 ALA A 17 REMARK 465 GLN A 18 REMARK 465 VAL A 19 REMARK 465 VAL A 20 REMARK 465 GLU A 21 REMARK 465 LEU A 22 REMARK 465 THR A 23 REMARK 465 ARG A 24 REMARK 465 SER A 25 REMARK 465 LEU A 26 REMARK 465 LEU A 27 REMARK 465 SER A 28 REMARK 465 GLY A 29 REMARK 465 GLY A 30 REMARK 465 ALA A 31 REMARK 465 GLU A 32 REMARK 465 PRO A 33 REMARK 465 LEU A 34 REMARK 465 GLU A 35 REMARK 465 VAL A 36 REMARK 465 ILE A 37 REMARK 465 ASN A 38 REMARK 465 LYS A 39 REMARK 465 GLY A 40 REMARK 465 LEU A 41 REMARK 465 ILE A 42 REMARK 465 ALA A 43 REMARK 465 GLY A 44 REMARK 465 MET A 45 REMARK 465 ASP A 46 REMARK 465 ARG A 47 REMARK 465 VAL A 48 REMARK 465 GLY A 49 REMARK 465 VAL A 50 REMARK 465 LEU A 51 REMARK 465 PHE A 52 REMARK 465 LYS A 53 REMARK 465 ASN A 54 REMARK 465 ASN A 55 REMARK 465 GLU A 56 REMARK 465 MET A 57 REMARK 465 PHE A 58 REMARK 465 VAL A 59 REMARK 465 PRO A 60 REMARK 465 GLU A 61 REMARK 465 VAL A 62 REMARK 465 LEU A 63 REMARK 465 MET A 64 REMARK 465 SER A 65 REMARK 465 ALA A 66 REMARK 465 ASN A 67 REMARK 465 ALA A 68 REMARK 465 MET A 69 REMARK 465 ASN A 70 REMARK 465 ALA A 71 REMARK 465 GLY A 72 REMARK 465 VAL A 73 REMARK 465 GLU A 74 REMARK 465 VAL A 75 REMARK 465 VAL A 76 REMARK 465 LYS A 77 REMARK 465 GLN A 78 REMARK 465 SER A 79 REMARK 465 GLN A 80 REMARK 465 GLN A 81 REMARK 465 ALA A 82 REMARK 465 PHE A 83 REMARK 465 ASP A 84 REMARK 465 GLU A 210 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 171 CG CD NE CZ NH1 NH2 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 B1M A 301 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 101 NE2 REMARK 620 2 B1M A 301 N21 96.2 REMARK 620 3 B1M A 301 N22 94.2 91.6 REMARK 620 4 B1M A 301 N23 83.5 174.2 94.2 REMARK 620 5 B1M A 301 N24 95.5 82.0 168.9 92.2 REMARK 620 6 HOH A 458 O 174.9 88.3 83.1 92.3 87.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE B1M A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 605 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SECSG-B12 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: B12 RELATED DB: TARGETTRACK DBREF 1Y80 A 1 210 GB 49235916 ZP_00329980 1 210 SEQRES 1 A 210 MET PRO THR TYR GLU GLU LEU SER GLN ALA VAL PHE GLU SEQRES 2 A 210 GLY ASP GLU ALA GLN VAL VAL GLU LEU THR ARG SER LEU SEQRES 3 A 210 LEU SER GLY GLY ALA GLU PRO LEU GLU VAL ILE ASN LYS SEQRES 4 A 210 GLY LEU ILE ALA GLY MET ASP ARG VAL GLY VAL LEU PHE SEQRES 5 A 210 LYS ASN ASN GLU MET PHE VAL PRO GLU VAL LEU MET SER SEQRES 6 A 210 ALA ASN ALA MET ASN ALA GLY VAL GLU VAL VAL LYS GLN SEQRES 7 A 210 SER GLN GLN ALA PHE ASP MET PRO SER VAL GLY LYS ILE SEQRES 8 A 210 VAL LEU GLY THR VAL LYS GLY ASP LEU HIS ASP ILE GLY SEQRES 9 A 210 LYS ASN LEU VAL ALA MET MET LEU GLU SER GLY GLY PHE SEQRES 10 A 210 THR VAL TYR ASN LEU GLY VAL ASP ILE GLU PRO GLY LYS SEQRES 11 A 210 PHE VAL GLU ALA VAL LYS LYS TYR GLN PRO ASP ILE VAL SEQRES 12 A 210 GLY MET SER ALA LEU LEU THR THR THR MET MET ASN MET SEQRES 13 A 210 LYS SER THR ILE ASP ALA LEU ILE ALA ALA GLY LEU ARG SEQRES 14 A 210 ASP ARG VAL LYS VAL ILE VAL GLY GLY ALA PRO LEU SER SEQRES 15 A 210 GLN ASP PHE ALA ASP GLU ILE GLY ALA ASP GLY TYR ALA SEQRES 16 A 210 PRO ASP ALA ALA SER ALA THR GLU LEU CYS ARG GLN LEU SEQRES 17 A 210 LEU GLU HET B1M A 301 91 HET UNX A 601 1 HET UNX A 602 1 HET UNX A 603 1 HET UNX A 604 1 HET UNX A 605 1 HETNAM B1M CO-5-METHOXYBENZIMIDAZOLYLCOBAMIDE HETNAM UNX UNKNOWN ATOM OR ION HETSYN B1M FACTOR IIIM FORMUL 2 B1M C61 H86 CO N13 O15 P 3+ FORMUL 3 UNX 5(X) FORMUL 8 HOH *72(H2 O) HELIX 1 1 ASP A 102 GLY A 115 1 14 HELIX 2 2 GLU A 127 GLN A 139 1 13 HELIX 3 3 LEU A 149 THR A 152 5 4 HELIX 4 4 MET A 153 ALA A 166 1 14 HELIX 5 5 LEU A 168 VAL A 172 5 5 HELIX 6 6 SER A 182 GLY A 190 1 9 HELIX 7 7 ASP A 197 LEU A 209 1 13 SHEET 1 A 5 THR A 118 ASN A 121 0 SHEET 2 A 5 LYS A 90 THR A 95 1 N ILE A 91 O TYR A 120 SHEET 3 A 5 ILE A 142 SER A 146 1 O GLY A 144 N VAL A 92 SHEET 4 A 5 LYS A 173 GLY A 177 1 O LYS A 173 N VAL A 143 SHEET 5 A 5 GLY A 193 TYR A 194 1 O GLY A 193 N VAL A 176 LINK CO B1M A 301 NE2 HIS A 101 1555 1555 2.42 LINK CO B1M A 301 O HOH A 458 1555 1555 2.66 SITE 1 AC1 38 GLY A 98 ASP A 99 LEU A 100 HIS A 101 SITE 2 AC1 38 ASP A 102 ILE A 103 GLY A 104 VAL A 108 SITE 3 AC1 38 SER A 114 GLY A 115 GLY A 144 MET A 145 SITE 4 AC1 38 SER A 146 LEU A 148 LEU A 149 THR A 150 SITE 5 AC1 38 ALA A 165 ALA A 166 GLY A 167 ASP A 170 SITE 6 AC1 38 ILE A 175 GLY A 177 GLY A 178 ALA A 179 SITE 7 AC1 38 ALA A 195 PRO A 196 ASP A 197 ALA A 198 SITE 8 AC1 38 ARG A 206 HOH A 401 HOH A 403 HOH A 414 SITE 9 AC1 38 HOH A 430 HOH A 441 HOH A 447 HOH A 453 SITE 10 AC1 38 HOH A 458 HOH A 459 SITE 1 AC2 3 THR A 150 THR A 151 GLN A 207 SITE 1 AC3 1 THR A 151 SITE 1 AC4 4 SER A 182 GLN A 183 UNX A 604 UNX A 605 SITE 1 AC5 4 SER A 182 GLN A 183 ASP A 184 UNX A 603 SITE 1 AC6 6 LYS A 136 SER A 182 TYR A 194 HOH A 423 SITE 2 AC6 6 HOH A 428 UNX A 603 CRYST1 55.689 62.738 34.543 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017957 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015939 0.000000 0.00000 SCALE3 0.000000 0.000000 0.028949 0.00000 MASTER 377 0 6 7 5 0 16 6 0 0 0 17 END